FFCP PHASE1:Hg19::chr9:5457352..5457365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29126 | |EntrezGene=29126 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17635 | |HGNC=17635 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000474218_5end | |association_with_transcript=-18bp_to_ENST00000474218_5end | ||
|cluster_id=chr9:5457352..5457365,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_2_at_CD274_5end | |description=CAGE_peak_2_at_CD274_5end | ||
|id=chr9:5457352..5457365,+ | |id=chr9:5457352..5457365,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.36e-12!70;CL:0000557!2.19e-12!71;CL:0002057!5.63e-12!42;CL:0002009!2.23e-11!65;CL:0002194!6.66e-11!63;CL:0000576!6.66e-11!63;CL:0000040!6.66e-11!63;CL:0000559!6.66e-11!63;CL:0000860!9.90e-11!45;CL:0000766!5.29e-10!76;CL:0002031!1.62e-09!124;CL:0000738!2.64e-08!140;CL:0000990!1.20e-07!8;CL:0002087!3.52e-07!119;CL:0000763!6.12e-07!112;CL:0000049!6.12e-07!112 | |ontology_enrichment_celltype=CL:0000839!1.36e-12!70;CL:0000557!2.19e-12!71;CL:0002057!5.63e-12!42;CL:0002009!2.23e-11!65;CL:0002194!6.66e-11!63;CL:0000576!6.66e-11!63;CL:0000040!6.66e-11!63;CL:0000559!6.66e-11!63;CL:0000860!9.90e-11!45;CL:0000766!5.29e-10!76;CL:0002031!1.62e-09!124;CL:0000738!2.64e-08!140;CL:0000990!1.20e-07!8;CL:0002087!3.52e-07!119;CL:0000763!6.12e-07!112;CL:0000049!6.12e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-51;33!CL:0002057;1.83e-51;33!CL:0000473;3.99e-36;39!CL:0000234;3.99e-36;39!CL:0000576;7.44e-27;48!CL:0000766;1.74e-12;69!CL:0000763;4.29e-08;100!CL:0002087;3.89e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.21e-45,42;CL:0002057,9.21e-45,42;CL:0000473,6.42e-39,48;CL:0000234,6.42e-39,48;CL:0002194,2.19e-35,59;CL:0000576,2.19e-35,59;CL:0000040,2.19e-35,59;CL:0000559,2.19e-35,59;CL:0002009,3.55e-34,61;CL:0000839,1.83e-31,66;CL:0000557,5.72e-31,67;CL:0000766,1.07e-28,72;CL:0000763,1.76e-18,108;CL:0000049,1.76e-18,108;CL:0002087,3.15e-17,115;CL:0002031,2.02e-16,120;CL:0000738,3.12e-14,136;CL:0002032,1.13e-11,161;CL:0000837,1.13e-11,161;CL:0000037,4.32e-11,168;CL:0000988,2.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-34;42!CL:0000049;8.83e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;4.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.96e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.90e-11!80;UBERON:0001474!1.94e-09!86;UBERON:0002390!4.06e-09!102;UBERON:0003061!4.06e-09!102;UBERON:0002193!4.02e-08!112;UBERON:0004765!4.69e-08!101;UBERON:0001434!4.69e-08!101 | |ontology_enrichment_uberon=UBERON:0002371!7.90e-11!80;UBERON:0001474!1.94e-09!86;UBERON:0002390!4.06e-09!102;UBERON:0003061!4.06e-09!102;UBERON:0002193!4.02e-08!112;UBERON:0004765!4.69e-08!101;UBERON:0001434!4.69e-08!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.29e-27,76;UBERON:0004765,8.31e-26,90;UBERON:0001474,5.64e-25,82;UBERON:0001434,5.09e-23,100;UBERON:0002405,8.62e-22,93;UBERON:0002390,1.41e-20,98;UBERON:0003061,1.41e-20,98;UBERON:0002193,1.76e-18,108;UBERON:0002204,7.11e-13,167;UBERON:0003081,8.90e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0.840547463227464,0.164201178899891,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,9.78154133895312,4.86705342405291,8.27687804610048,0.689491361473237,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,2.30895910130701,2.79249120670285,3.40979800426155,2.61188314765726,1.13477044938228,1.24564449799115,4.27122730936464,5.73631210262222,4.56096573880745,7.26479403160043,0.736555271975129,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0.649094787309367,0.696518949197069,1.72845348674525,0,0,0,0,0,0,0,0,0.825354125820202,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0,0.148631162288728,0,1.00789276919316,0.141775097242386,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0.192190067365106,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0.824019371133798,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0.653174720218818,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,1.34940933649081,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.194860308839388,0.132864840313363,0.817826971279221,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.460935950223117,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.399764623699716,0,0.352894871715692,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.805095174364105,0.320568492303233 | 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| ||
|short_description=p2@CD274 | |short_description=p2@CD274 | ||
}} | }} |
Latest revision as of 13:42, 17 September 2015
Short description: | p2@CD274 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD274_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -18bp_to_ENST00000474218_5end |
EntrezGene: | CD274 |
HGNC: | 17635 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.21e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.21e-45 | 42 |
defensive cell | 6.42e-39 | 48 |
phagocyte | 6.42e-39 | 48 |
monopoietic cell | 2.19e-35 | 59 |
monocyte | 2.19e-35 | 59 |
monoblast | 2.19e-35 | 59 |
promonocyte | 2.19e-35 | 59 |
macrophage dendritic cell progenitor | 3.55e-34 | 61 |
myeloid lineage restricted progenitor cell | 1.83e-31 | 66 |
granulocyte monocyte progenitor cell | 5.72e-31 | 67 |
myeloid leukocyte | 1.07e-28 | 72 |
myeloid cell | 1.76e-18 | 108 |
common myeloid progenitor | 1.76e-18 | 108 |
nongranular leukocyte | 3.15e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 2.02e-16 | 120 |
leukocyte | 3.12e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.13e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-11 | 161 |
hematopoietic stem cell | 4.32e-11 | 168 |
hematopoietic cell | 2.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.29e-27 | 76 |
skeletal element | 8.31e-26 | 90 |
bone element | 5.64e-25 | 82 |
skeletal system | 5.09e-23 | 100 |
immune system | 8.62e-22 | 93 |
hematopoietic system | 1.41e-20 | 98 |
blood island | 1.41e-20 | 98 |
hemolymphoid system | 1.76e-18 | 108 |
musculoskeletal system | 7.11e-13 | 167 |
lateral plate mesoderm | 8.90e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.96e-11 | 1 |