FFCP PHASE1:Hg19::chr20:62273101..62273120,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15926 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=53bp_to_AK131326_5end | |||
|cluster_id=chr20:62273101..62273120,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_7_at_STMN3_5end | |||
|id=chr20:62273101..62273120,- | |||
|ontology_enrichment_celltype=CL:0000838!3.20e-31!52;CL:0000542!2.10e-30!53;CL:0000051!2.10e-30!53;CL:0002087!5.07e-26!119;CL:0000791!2.85e-25!18;CL:0000789!2.85e-25!18;CL:0002420!2.85e-25!18;CL:0002419!2.85e-25!18;CL:0000790!2.85e-25!18;CL:0000738!1.22e-23!140;CL:0002031!1.08e-22!124;CL:0000084!1.75e-18!25;CL:0000827!1.75e-18!25;CL:0000625!7.00e-18!11;CL:0000037!6.96e-17!172;CL:0000566!6.96e-17!172;CL:0000236!2.84e-16!14;CL:0002032!1.40e-15!165;CL:0000837!1.40e-15!165;CL:0000988!4.88e-15!182;CL:0000624!7.68e-11!6;CL:0000945!9.47e-11!24;CL:0000826!9.47e-11!24;CL:0002393!1.23e-07!9;CL:0002397!1.23e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.24e-45;18!CL:0000789;5.24e-45;18!CL:0002419;5.24e-45;18!CL:0000236;9.68e-34;13!CL:0000084;2.20e-31;25!CL:0000542;1.95e-28;53!CL:0000625;4.52e-27;11!CL:0000624;7.48e-23;6!CL:0000945;3.34e-17;24!CL:0000898;3.73e-13;3!CL:0000815;1.95e-09;2!CL:0000792;1.95e-09;2!CL:0002677;1.95e-09;2!CL:0002087;1.19e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.59e-47,52;CL:0000542,2.73e-46,53;CL:0000051,2.73e-46,53;CL:0000791,6.47e-45,18;CL:0000789,6.47e-45,18;CL:0002420,6.47e-45,18;CL:0002419,6.47e-45,18;CL:0000790,6.47e-45,18;CL:0000084,2.56e-31,25;CL:0000827,2.56e-31,25;CL:0000236,3.16e-31,14;CL:0000625,5.54e-27,11;CL:0000624,7.49e-23,6;CL:0002087,9.92e-21,115;CL:0000945,3.08e-17,24;CL:0000826,3.08e-17,24;CL:0002031,1.71e-16,120;CL:0000738,1.80e-16,136;CL:0000898,3.89e-13,3;CL:0000037,4.79e-12,168;CL:0000988,4.28e-11,177;CL:0002032,1.07e-10,161;CL:0000837,1.07e-10,161;CL:0000815,2.03e-09,2;CL:0000792,2.03e-09,2;CL:0002677,2.03e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;5.24e-45;18!CL:0000051;1.95e-28;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.49e-14!15;UBERON:0000179!4.49e-14!15;UBERON:0000463!4.49e-14!15;UBERON:0002390!3.17e-09!102;UBERON:0003061!3.17e-09!102;UBERON:0002193!5.86e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.17e-18;15!UBERON:0000179;2.17e-18;15!UBERON:0000463;2.17e-18;15!UBERON:0002390;2.27e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.35e-18,15;UBERON:0000179,2.35e-18,15;UBERON:0000463,2.35e-18,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,0,0,0,0,0.154934401160603,0,0,0,0,0.434021741431704,0.671746422719773,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.425208599930087,0.838634582033504,0.336985893439485,0.450530678524519,0,0.570025487482497,0.59675003159727,0.182664153764634,5.27988733383968,3.82297027883492,2.66852776159066,1.70692089026603,8.00791974072025,3.4485146397269,4.62731410949403,3.81621501814146,6.83055562931338,2.34894875748376,1.14681968437569,0,0,0,1.37696839079683,2.35806457649499,1.43921049299656,4.17966238476695,13.0368906653436,8.5220605032252,29.2240092611867,2.45103005147382,7.36514768687093,4.2091439970888,10.2905468230706,1.40900451698243,2.73124629875744,0.986627427622057,1.65810010671509,4.05724320029073,13.4940772477475,8.82884732696053,13.589618094647,2.03956816855619,5.3650869104269,5.49803912772208,5.81945291644857,3.82278497188916,5.20866763085135,1.90090408889675,3.61380285786655,9.08704939196371,6.24653632761729,3.07810427657222,3.28451198768419,1.00803371612366,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.646882724578552,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,4.13536052245775,1.94142780736755,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,2.53723804616085,0.764637207142375,1.13929437434833,2.85878130549347,3.29089818468955,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0.0636471582781649,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p7@STMN3 | |||
}} |
Latest revision as of 13:41, 17 September 2015
Short description: | p7@STMN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_STMN3_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 53bp_to_AK131326_5end |
EntrezGene: | STMN3 |
HGNC: | 15926 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.59e-47 | 52 |
lymphocyte | 2.73e-46 | 53 |
common lymphoid progenitor | 2.73e-46 | 53 |
mature alpha-beta T cell | 6.47e-45 | 18 |
alpha-beta T cell | 6.47e-45 | 18 |
immature T cell | 6.47e-45 | 18 |
mature T cell | 6.47e-45 | 18 |
immature alpha-beta T cell | 6.47e-45 | 18 |
T cell | 2.56e-31 | 25 |
pro-T cell | 2.56e-31 | 25 |
B cell | 3.16e-31 | 14 |
CD8-positive, alpha-beta T cell | 5.54e-27 | 11 |
CD4-positive, alpha-beta T cell | 7.49e-23 | 6 |
nongranular leukocyte | 9.92e-21 | 115 |
lymphocyte of B lineage | 3.08e-17 | 24 |
pro-B cell | 3.08e-17 | 24 |
hematopoietic lineage restricted progenitor cell | 1.71e-16 | 120 |
leukocyte | 1.80e-16 | 136 |
naive T cell | 3.89e-13 | 3 |
hematopoietic stem cell | 4.79e-12 | 168 |
hematopoietic cell | 4.28e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.07e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-10 | 161 |
regulatory T cell | 2.03e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.03e-09 | 2 |
naive regulatory T cell | 2.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.35e-18 | 15 |
haemolymphatic fluid | 2.35e-18 | 15 |
organism substance | 2.35e-18 | 15 |