FFCP PHASE1:Hg19::chr1:155889835..155889839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32635 | |HGNC=32635 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000384744_5end | |association_with_transcript=0bp_to_ENST00000384744_5end | ||
|cluster_id=chr1:155889835..155889839,- | |||
|coexpression_cluster_id=C673 | |coexpression_cluster_id=C673 | ||
|description=CAGE_peak_1_at_SNORA42_5end | |description=CAGE_peak_1_at_SNORA42_5end | ||
|id=chr1:155889835..155889839,- | |id=chr1:155889835..155889839,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.46e-07!143 | |ontology_enrichment_disease=DOID:0050687!1.46e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.53e-08!57;UBERON:0005068!7.53e-08!57;UBERON:0006241!7.53e-08!57;UBERON:0007135!7.53e-08!57 | |ontology_enrichment_uberon=UBERON:0001049!7.53e-08!57;UBERON:0005068!7.53e-08!57;UBERON:0006241!7.53e-08!57;UBERON:0007135!7.53e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;3.02e-08;32!UBERON:0003528;9.31e-08;34!UBERON:0002020;9.31e-08;34!UBERON:0002619;1.07e-07;22!UBERON:0000200;3.19e-07;6!UBERON:0001893;5.00e-07;34!UBERON:0001869;7.78e-07;32!UBERON:0001950;8.51e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.26e-09,34;UBERON:0002020,1.26e-09,34;UBERON:0002791,7.33e-09,32;UBERON:0001049,8.41e-09,56;UBERON:0005068,8.41e-09,56;UBERON:0006241,8.41e-09,56;UBERON:0007135,8.41e-09,56;UBERON:0000073,3.00e-08,53;UBERON:0002616,3.00e-08,53;UBERON:0001893,3.40e-08,34;UBERON:0002619,8.88e-08,22;UBERON:0002780,1.49e-07,41;UBERON:0001890,1.49e-07,41;UBERON:0003080,1.49e-07,41;UBERON:0006240,1.49e-07,41;UBERON:0001869,1.85e-07,32;UBERON:0002346,2.18e-07,86;UBERON:0000200,2.43e-07,6;UBERON:0001950,7.09e-07,20 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,5.06599756336621,0,0,0,0,0,1.05506791291381,0,0.662794751455832,0,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0.286235987131057,0,0,0.0764134057479513,0.410502947249729,0.550975469195755,0.393364276848904,0,0,0,0,0,0,0.284338464974843,0,1.10799081706375,0.802177789880567,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27685187643779,2.93618594685469,1.14681968437569,0,0.560508562981536,0,0,31.4408610199332,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0.512365278902701,0,0.328875809207352,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67440195783507,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0.560677600142307,0,0,0,0.538842688278752,0.653847612453835,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.866198686566443,1.85194205030644,1.33177906564219,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,5.917119267892,0,0,0,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0,0.448340575974109,0.394061520403854,3.01878604803324,1.66845947163673,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0.542530047399471,0,0,0,0,0,0,5.17365356462525,0,0.553107505625109,0,0.391602314925481,1.37257369524342,0.620304078368662,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0.784349769176855,1.46139224653261,0,1.13733384070897,0.680374821106063,0,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0.580066775656914,0,0,0.165284915360978,0,0,0.2023155617111,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,1.68471475667626,0.886860307073351,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0,0,0,0,5.01268954180134,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,1.8714054040822,0,0.485442086998054,0,0.568272293612826,0,0,0,0.994147647766298,2.39138007897872,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,14.3689855408164,0,0,0,0,0.260427761085233,0.0874599999961957,0,1.137934482855,0.508507300585533,0.472775363535873,0,0.291604613383254,1.90987494426621,0,0.241192877250816,0,1.43753037910592,0,0,0.10893846351899,0.139423744278603,0,0,0.922255617552241,0,0.54323685961004,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,1.60515529459758,0.468528891450678,0.182454789215666,0,0,2.36750641709634,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0.967563312890852,0.438535902517113,0.410577285266046,0,0.0882561266915003,4.97157629717171,0.137041924646751,0.19871461170299,0,0,0,0,0.19980960958213,1.00863292007874,0.229073192331831,2.05913997434357,0.14405479798815,0,1.88555227693436,0,0.104602846312333,0,0,0,2.87501295673185,0,0,1.31443677139657,0,0.916641696046735,1.43574604915363,0.798716001995964,0,0,0,1.08089965062721,1.16495949527454,0.630265458457789,0.412079291905832,0,0.0984274815147488,0.0846733320657845,0.795229689809303,2.58786471611994,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,1.34173875039706,0.0788057072991982,0,0.105600336519406,0.35857467866569,0.191915197319445,0,2.64836788146173,0,0.542999601753713,0,0,0,0.574647645245373,0.170388021785422,0,0,0,1.42211251997706,0.79339561045614,0,0,0,0,2.07119527673598,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0.157054096250234,2.65820453990096,1.83039397352945,3.254964198369,0,2.21858103073705,0,0.968440444553616,0.37494122388632,0.151649117541648,0.285465333544967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| ||
|short_description=p1@SNORA42 | |short_description=p1@SNORA42 | ||
}} | }} |
Latest revision as of 13:38, 17 September 2015
Short description: | p1@SNORA42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORA42_5end |
Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
Association with transcript: | 0bp_to_ENST00000384744_5end |
EntrezGene: | NA |
HGNC: | 32635 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 1.26e-09 | 34 |
gray matter | 1.26e-09 | 34 |
regional part of telencephalon | 7.33e-09 | 32 |
neural tube | 8.41e-09 | 56 |
neural rod | 8.41e-09 | 56 |
future spinal cord | 8.41e-09 | 56 |
neural keel | 8.41e-09 | 56 |
regional part of nervous system | 3.00e-08 | 53 |
regional part of brain | 3.00e-08 | 53 |
telencephalon | 3.40e-08 | 34 |
regional part of cerebral cortex | 8.88e-08 | 22 |
regional part of forebrain | 1.49e-07 | 41 |
forebrain | 1.49e-07 | 41 |
anterior neural tube | 1.49e-07 | 41 |
future forebrain | 1.49e-07 | 41 |
cerebral hemisphere | 1.85e-07 | 32 |
neurectoderm | 2.18e-07 | 86 |
gyrus | 2.43e-07 | 6 |
neocortex | 7.09e-07 | 20 |