FFCP PHASE1:Hg19::chr19:36246042..36246059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126393 | |EntrezGene=126393 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=26511 | |HGNC=26511 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=147bp_to_AK026458_5end | |association_with_transcript=147bp_to_AK026458_5end | ||
|cluster_id=chr19:36246042..36246059,- | |||
|coexpression_cluster_id=C339 | |coexpression_cluster_id=C339 | ||
|description=CAGE_peak_9_at_HSPB6_5end | |description=CAGE_peak_9_at_HSPB6_5end | ||
|id=chr19:36246042..36246059,- | |id=chr19:36246042..36246059,- | ||
|ontology_enrichment_celltype=CL:0000055!5.48e-15!180;CL:0000183!1.98e-14!59;CL:0000187!2.73e-14!54;CL:0000136!1.73e-13!15;CL:0000680!1.73e-13!57;CL:0000056!1.73e-13!57;CL:0000355!1.73e-13!57;CL:0000192!1.19e-12!42;CL:0000514!1.19e-12!42;CL:0000393!1.76e-11!60;CL:0000211!1.76e-11!60;CL:0000057!1.51e-09!75;CL:0002334!3.26e-09!12;CL:0000359!2.93e-07!32 | |ontology_enrichment_celltype=CL:0000055!5.48e-15!180;CL:0000183!1.98e-14!59;CL:0000187!2.73e-14!54;CL:0000136!1.73e-13!15;CL:0000680!1.73e-13!57;CL:0000056!1.73e-13!57;CL:0000355!1.73e-13!57;CL:0000192!1.19e-12!42;CL:0000514!1.19e-12!42;CL:0000393!1.76e-11!60;CL:0000211!1.76e-11!60;CL:0000057!1.51e-09!75;CL:0002334!3.26e-09!12;CL:0000359!2.93e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.40e-18;13!CL:0002334;5.64e-10;12!CL:0002615;4.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.54e-21,15;CL:0002334,6.80e-10,12;CL:0002615,5.36e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.82e-07;3!DOID:127;4.82e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.78e-07,3;DOID:127,4.78e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.37e-17!63;UBERON:0001015!2.37e-17!63;UBERON:0000383!2.37e-17!63;UBERON:0001134!2.59e-16!61;UBERON:0002036!2.59e-16!61;UBERON:0003082!2.59e-16!61;UBERON:0004290!4.67e-14!70;UBERON:0000914!5.59e-13!83;UBERON:0002329!5.59e-13!83;UBERON:0003077!5.59e-13!83;UBERON:0003059!5.59e-13!83;UBERON:0007282!5.59e-13!83;UBERON:0009618!5.59e-13!83;UBERON:0007285!5.59e-13!83;UBERON:0000486!2.11e-11!82;UBERON:0000475!5.99e-10!365;UBERON:0005256!1.13e-09!143;UBERON:0001013!2.14e-09!14;UBERON:0007023!2.84e-09!115;UBERON:0002100!2.56e-08!216;UBERON:0001981!2.98e-07!60;UBERON:0007500!2.98e-07!60;UBERON:0004537!2.98e-07!60;UBERON:0006965!2.98e-07!60;UBERON:0002049!3.99e-07!79;UBERON:0007798!3.99e-07!79;UBERON:0000479!5.15e-07!787;UBERON:0003688!5.24e-07!6;UBERON:0002358!5.24e-07!6;UBERON:0003684!5.24e-07!6;UBERON:0001178!5.24e-07!6 | |ontology_enrichment_uberon=UBERON:0002385!2.37e-17!63;UBERON:0001015!2.37e-17!63;UBERON:0000383!2.37e-17!63;UBERON:0001134!2.59e-16!61;UBERON:0002036!2.59e-16!61;UBERON:0003082!2.59e-16!61;UBERON:0004290!4.67e-14!70;UBERON:0000914!5.59e-13!83;UBERON:0002329!5.59e-13!83;UBERON:0003077!5.59e-13!83;UBERON:0003059!5.59e-13!83;UBERON:0007282!5.59e-13!83;UBERON:0009618!5.59e-13!83;UBERON:0007285!5.59e-13!83;UBERON:0000486!2.11e-11!82;UBERON:0000475!5.99e-10!365;UBERON:0005256!1.13e-09!143;UBERON:0001013!2.14e-09!14;UBERON:0007023!2.84e-09!115;UBERON:0002100!2.56e-08!216;UBERON:0001981!2.98e-07!60;UBERON:0007500!2.98e-07!60;UBERON:0004537!2.98e-07!60;UBERON:0006965!2.98e-07!60;UBERON:0002049!3.99e-07!79;UBERON:0007798!3.99e-07!79;UBERON:0000479!5.15e-07!787;UBERON:0003688!5.24e-07!6;UBERON:0002358!5.24e-07!6;UBERON:0003684!5.24e-07!6;UBERON:0001178!5.24e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.31e-13;9!UBERON:0000042;3.31e-13;9!UBERON:0001013;5.59e-13;14!UBERON:0003688;4.82e-12;6!UBERON:0002358;4.82e-12;6!UBERON:0003684;4.82e-12;6!UBERON:0001178;4.82e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.99e-13,14;UBERON:0003688,6.79e-12,6;UBERON:0002358,6.79e-12,6;UBERON:0003684,6.79e-12,6;UBERON:0001178,6.79e-12,6;UBERON:0004457,2.35e-09,12;UBERON:0000042,2.35e-09,12;UBERON:0005256,6.27e-09,122;UBERON:0002385,6.60e-09,64;UBERON:0001015,6.60e-09,64;UBERON:0000383,6.60e-09,64;UBERON:0003104,1.68e-08,160;UBERON:0009142,1.68e-08,160;UBERON:0001134,2.16e-08,62;UBERON:0002036,2.16e-08,62;UBERON:0003082,2.16e-08,62;UBERON:0000926,2.54e-08,315;UBERON:0004120,2.54e-08,315;UBERON:0006603,2.54e-08,315;UBERON:0004797,3.58e-08,7;UBERON:0002329,3.60e-08,71;UBERON:0003059,3.60e-08,71;UBERON:0007282,3.60e-08,71;UBERON:0004290,3.60e-08,71;UBERON:0009618,3.60e-08,71;UBERON:0003077,5.69e-08,72;UBERON:0007285,5.69e-08,72;UBERON:0007524,8.88e-08,73;UBERON:0000486,1.21e-07,83;UBERON:0002100,4.65e-07,199;UBERON:0007503,6.78e-07,78 | |||
|phase1_expression=1.99846217197612,4.06790995392868,13.3906683891173,4.00293193412522,13.4088328328186,3.48935409640147,2.53299878168311,3.79031924056099,9.66386824339403,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0.443458794925128,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,1.98788780678127,1.51956613997496,0.264818361626438,1.43418310374407,2.12801029319014,0,0,0,0.933633106199299,0,0,0.151357427644931,0,0.234321431833797,1.5608003841516,0,1.64393548606981,0,0,0,0,0,0.826606249406124,0,0,3.64064544775211,1.43723628363248,0.168336113954066,0,0,0.438977620880838,0.612975591598039,0.300476117813194,0.226864366320042,0,0.427114777637135,0.211931901159562,0.300091096084402,1.33968288009971,0.515281080091258,0.744467425326359,0.337552664482532,0.68205903612839,1.00973509697646,0.460249493211497,0.646584227275248,0.355009592516614,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,3.25057549622385,3.60939740834793,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.258543431515556,25.0359512096318,0.845302752556,4.25500986535793,1.04007436911366,0,0,0.266422179016099,5.7191197463259,9.76718889704597,0,0,2.84313558994037,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.59498939234882,1.00034104211935,1.62759014219841,0.207970861530807,0,0.157702415033935,0,3.31040709700491,0,2.0694614258501,0.664225598535437,0.184369168541703,1.21637060255316,0.979005787313703,0.343143423810856,0,0,0,0,0,0.30239029332968,2.97729369382532,0.920771839728375,1.40330047216537,8.32904470162056,2.04682899626681,5.46903331888265,1.48418066444991,0.308419387605311,0.887808626565635,1.64254312027618,1.03850885836724,1.39452454151951,0,0,0,0.459257792658427,1.27463817604702,2.49136388422906,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0,0,1.35339005608971,0.154048617114644,0.15350367472613,0,0.751941714077915,0.725083469571143,0.170453254832202,1.06838442776085,0,0,0,0.10115778085555,15.8047486761077,1.88887408098384,0.6970372701606,0.616067160352178,0.532306030317022,1.73986598415015,1.11194531462352,0,0,0.316379424718726,0.762520775695299,2.303080121802,2.99557291623744,1.59101623962968,0,0.539617372749944,1.09814811894422,0.589062011728432,0.606547444719948,0,0.421258456238981,1.46290121726877,0.487426979262569,1.05650146756755,1.36499911407986,3.53513579884282,4.52032466480971,0.551365343546124,0,1.31535265576129,4.6302042741335,7.21484227251296,0.202910376962704,0.92947049429925,0.845086807596724,0.860468113224309,0.687743287091848,0,0.709522128141196,3.79993743535795,2.30506425071931,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0.311039587661807,0,0,0,4.04437963111428,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.61595542857974,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,2.4441205797345,0,0,0,0,2.40773294189637,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,1.89184635718778,0,0,0,0.775912131907355,0,1.35588444468319,0,0,0.0633107959558787,0,0,5.12287187374446,0,0,0,0.343189995723929,0,0,0,0,0,0,0.577901179803038,0,0.136905378891993,0,0,0,1.11712960508902,7.79145441639724,2.15361907373044,2.39614800598789,5.57993862577542,2.00854311697685,0.403100834920358,2.16179930125442,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0,0,0,0,0,3.97255182219259,0,22.8059832736559,4.32110745600634,11.1039702437199,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,1.63205341010842,0.7520696820681,2.75711019087115,2.29510841496863,0,0,0.488105059607853,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,1.10961172300523,1.32582103692562,0.251567901752575,1.77962244319307,1.37304041038154,2.11723293268535,0.466311601748341,0.295710299979268,0.159296767163702,0,0.465788870628778,1.65882483136342,1.06336685823198,0,0.150257608997218,0.761610424337591,0,0.727394636810238,0.107410557042488,0,1.99047944349308,0,1.37358282073117,2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| ||
|short_description=p9@HSPB6 | |short_description=p9@HSPB6 | ||
}} | }} |
Latest revision as of 13:33, 17 September 2015
Short description: | p9@HSPB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HSPB6_5end |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | 147bp_to_AK026458_5end |
EntrezGene: | HSPB6 |
HGNC: | 26511 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.54e-21 | 15 |
preadipocyte | 6.80e-10 | 12 |
adipocyte of omentum tissue | 5.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 7.99e-13 | 14 |
omentum | 6.79e-12 | 6 |
peritoneum | 6.79e-12 | 6 |
abdominal cavity | 6.79e-12 | 6 |
visceral peritoneum | 6.79e-12 | 6 |
cavity lining | 2.35e-09 | 12 |
serous membrane | 2.35e-09 | 12 |
trunk mesenchyme | 6.27e-09 | 122 |
muscle tissue | 6.60e-09 | 64 |
musculature | 6.60e-09 | 64 |
musculature of body | 6.60e-09 | 64 |
mesenchyme | 1.68e-08 | 160 |
entire embryonic mesenchyme | 1.68e-08 | 160 |
skeletal muscle tissue | 2.16e-08 | 62 |
striated muscle tissue | 2.16e-08 | 62 |
myotome | 2.16e-08 | 62 |
mesoderm | 2.54e-08 | 315 |
mesoderm-derived structure | 2.54e-08 | 315 |
presumptive mesoderm | 2.54e-08 | 315 |
blood vessel layer | 3.58e-08 | 7 |
somite | 3.60e-08 | 71 |
presomitic mesoderm | 3.60e-08 | 71 |
presumptive segmental plate | 3.60e-08 | 71 |
dermomyotome | 3.60e-08 | 71 |
trunk paraxial mesoderm | 3.60e-08 | 71 |
paraxial mesoderm | 5.69e-08 | 72 |
presumptive paraxial mesoderm | 5.69e-08 | 72 |
dense mesenchyme tissue | 8.88e-08 | 73 |
multilaminar epithelium | 1.21e-07 | 83 |
trunk | 4.65e-07 | 199 |
epithelial vesicle | 6.78e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.78e-07 | 3 |
leiomyoma | 4.78e-07 | 3 |