FFCP PHASE1:Hg19::chr13:46700883..46700907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=324bp_to_BC015001_5end | |association_with_transcript=324bp_to_BC015001_5end | ||
|cluster_id=chr13:46700883..46700907,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_8_at_LCP1_5end | |description=CAGE_peak_8_at_LCP1_5end | ||
|id=chr13:46700883..46700907,- | |id=chr13:46700883..46700907,- | ||
|ontology_enrichment_celltype=CL:0000037!3.98e-85!172;CL:0000566!3.98e-85!172;CL:0000988!2.74e-81!182;CL:0002032!6.50e-80!165;CL:0000837!6.50e-80!165;CL:0000738!2.67e-78!140;CL:0002087!6.46e-64!119;CL:0002031!1.21e-62!124;CL:0000763!4.03e-52!112;CL:0000049!4.03e-52!112;CL:0000766!1.61e-43!76;CL:0002009!1.10e-38!65;CL:0000557!8.17e-38!71;CL:0002194!6.40e-37!63;CL:0000576!6.40e-37!63;CL:0000040!6.40e-37!63;CL:0000559!6.40e-37!63;CL:0000839!2.53e-36!70;CL:0002057!3.14e-32!42;CL:0000860!8.46e-29!45;CL:0000542!6.39e-23!53;CL:0000051!6.39e-23!53;CL:0000838!2.30e-22!52;CL:0000134!3.09e-19!358;CL:0002320!6.60e-18!365;CL:0000219!6.25e-15!390;CL:0000084!5.87e-11!25;CL:0000827!5.87e-11!25;CL:0000945!8.67e-11!24;CL:0000826!8.67e-11!24;CL:0000451!1.61e-09!10;CL:0000034!4.19e-09!444;CL:0000990!5.26e-09!8;CL:0000048!1.12e-08!430;CL:0002393!1.14e-08!9;CL:0002397!1.14e-08!9;CL:0000723!1.73e-08!436;CL:0000094!9.86e-08!8;CL:0000791!4.25e-07!18;CL:0000789!4.25e-07!18;CL:0002420!4.25e-07!18;CL:0002419!4.25e-07!18;CL:0000790!4.25e-07!18 | |ontology_enrichment_celltype=CL:0000037!3.98e-85!172;CL:0000566!3.98e-85!172;CL:0000988!2.74e-81!182;CL:0002032!6.50e-80!165;CL:0000837!6.50e-80!165;CL:0000738!2.67e-78!140;CL:0002087!6.46e-64!119;CL:0002031!1.21e-62!124;CL:0000763!4.03e-52!112;CL:0000049!4.03e-52!112;CL:0000766!1.61e-43!76;CL:0002009!1.10e-38!65;CL:0000557!8.17e-38!71;CL:0002194!6.40e-37!63;CL:0000576!6.40e-37!63;CL:0000040!6.40e-37!63;CL:0000559!6.40e-37!63;CL:0000839!2.53e-36!70;CL:0002057!3.14e-32!42;CL:0000860!8.46e-29!45;CL:0000542!6.39e-23!53;CL:0000051!6.39e-23!53;CL:0000838!2.30e-22!52;CL:0000134!3.09e-19!358;CL:0002320!6.60e-18!365;CL:0000219!6.25e-15!390;CL:0000084!5.87e-11!25;CL:0000827!5.87e-11!25;CL:0000945!8.67e-11!24;CL:0000826!8.67e-11!24;CL:0000451!1.61e-09!10;CL:0000034!4.19e-09!444;CL:0000990!5.26e-09!8;CL:0000048!1.12e-08!430;CL:0002393!1.14e-08!9;CL:0002397!1.14e-08!9;CL:0000723!1.73e-08!436;CL:0000094!9.86e-08!8;CL:0000791!4.25e-07!18;CL:0000789!4.25e-07!18;CL:0002420!4.25e-07!18;CL:0002419!4.25e-07!18;CL:0000790!4.25e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.47e-30;39!CL:0000234;7.47e-30;39!CL:0000860;4.33e-28;33!CL:0002057;4.33e-28;33!CL:0000576;1.21e-26;48!CL:0000766;4.21e-24;69!CL:0000738;5.39e-19;136!CL:0002087;1.52e-15;104!CL:0000763;7.36e-15;100!CL:0000990;2.59e-14;8!CL:0000988;2.33e-13;177!CL:0000451;2.73e-11;10!CL:0000840;2.47e-10;5!CL:0000094;3.84e-10;8!CL:0000235;9.81e-10;6!CL:0002393;1.18e-09;6!CL:0002397;1.18e-09;6!CL:0000945;8.53e-09;24!CL:0000453;1.30e-08;5!CL:0000542;4.03e-08;53!CL:0000219;1.92e-07;193!CL:0000081;5.68e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.17e-80,136;CL:0000037,9.80e-79,168;CL:0002032,1.30e-75,161;CL:0000837,1.30e-75,161;CL:0000988,3.13e-73,177;CL:0002087,5.02e-68,115;CL:0002031,4.97e-61,120;CL:0000763,6.45e-60,108;CL:0000049,6.45e-60,108;CL:0000766,5.95e-58,72;CL:0002009,2.05e-57,61;CL:0002194,1.94e-54,59;CL:0000576,1.94e-54,59;CL:0000040,1.94e-54,59;CL:0000559,1.94e-54,59;CL:0000473,6.04e-52,48;CL:0000234,6.04e-52,48;CL:0000557,8.91e-51,67;CL:0000839,5.79e-47,66;CL:0000860,1.88e-43,42;CL:0002057,1.88e-43,42;CL:0000134,4.40e-22,354;CL:0002320,4.14e-21,361;CL:0000219,1.05e-17,386;CL:0000990,2.51e-14,8;CL:0000542,7.83e-14,53;CL:0000051,7.83e-14,53;CL:0002393,9.39e-14,9;CL:0002397,9.39e-14,9;CL:0000048,1.33e-13,427;CL:0000838,4.02e-13,52;CL:0000723,4.80e-13,433;CL:0000034,8.12e-13,441;CL:0000451,2.67e-11,10;CL:0000840,3.20e-10,5;CL:0001029,3.20e-10,5;CL:0000094,4.49e-10,8;CL:0000235,7.41e-10,6;CL:0000945,6.44e-09,24;CL:0000826,6.44e-09,24;CL:0000453,1.14e-08,5;CL:0000081,6.31e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-30;42!CL:0000049;1.03e-15;108!CL:0000051;4.03e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!2.28e-17!51;DOID:0060083!2.28e-17!51;DOID:1240!2.85e-12!39;DOID:8692!1.92e-08!31;DOID:0060058!5.20e-08!10 | |ontology_enrichment_disease=DOID:2531!2.28e-17!51;DOID:0060083!2.28e-17!51;DOID:1240!2.85e-12!39;DOID:8692!1.92e-08!31;DOID:0060058!5.20e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.51e-11;10!DOID:2531;7.55e-08;51!DOID:0060083;7.55e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.10e-13,51;DOID:0060083,1.10e-13,51;DOID:0060058,6.16e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-47!102;UBERON:0003061!1.02e-47!102;UBERON:0002193!1.69e-42!112;UBERON:0002371!2.93e-33!80;UBERON:0001474!4.63e-29!86;UBERON:0002405!6.41e-25!115;UBERON:0004765!1.26e-21!101;UBERON:0001434!1.26e-21!101;UBERON:0002384!1.30e-16!375;UBERON:0000178!1.96e-11!15;UBERON:0000179!1.96e-11!15;UBERON:0000463!1.96e-11!15;UBERON:0003081!4.86e-10!216 | |ontology_enrichment_uberon=UBERON:0002390!1.02e-47!102;UBERON:0003061!1.02e-47!102;UBERON:0002193!1.69e-42!112;UBERON:0002371!2.93e-33!80;UBERON:0001474!4.63e-29!86;UBERON:0002405!6.41e-25!115;UBERON:0004765!1.26e-21!101;UBERON:0001434!1.26e-21!101;UBERON:0002384!1.30e-16!375;UBERON:0000178!1.96e-11!15;UBERON:0000179!1.96e-11!15;UBERON:0000463!1.96e-11!15;UBERON:0003081!4.86e-10!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.29e-12;15!UBERON:0000179;3.29e-12;15!UBERON:0000463;3.29e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.04e-57,98;UBERON:0003061,3.04e-57,98;UBERON:0002193,1.23e-51,108;UBERON:0002371,8.25e-45,76;UBERON:0001474,2.73e-40,82;UBERON:0002405,7.33e-40,93;UBERON:0004765,3.27e-35,90;UBERON:0001434,5.01e-30,100;UBERON:0002384,8.71e-20,371;UBERON:0003081,4.19e-17,203;UBERON:0000178,1.71e-12,15;UBERON:0000179,1.71e-12,15;UBERON:0000463,1.71e-12,15;UBERON:0002204,8.41e-12,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,3.82067028739756,3.61242593579761,2.44003422072406,1.57345710739562,1.15148819429164,0.464448369948228,0,0,0,1.31694240986513,2.13253848731132,0.880801318004542,2.21598163412751,1.40381113229099,2.38711957787437,1.11957737119962,0.32389366601898,0.515151135268373,1.89017710413434,0.755751887377619,0.727752183563449,2.32429036905685,4.52284676824008,2.78735733805593,2.8769239232215,2.56160706529101,2.12834006899727,3.10271112662957,0.645484683583826,2.70852973188684,2.63539275359647,1.36453075028923,1.57306439111559,5.50951006267625,0.962787081228281,3.83602275479425,1.9791078011203,1.39624560335142,1.27867425159808,6.96502172708602,2.8369261234557,3.11411124497787,5.02497330513487,0.521482918420201,3.47502151528187,3.02699751316684,3.31449872388808,6.64571013625857,5.91514801673437,4.25208599930087,3.77385561915077,3.48218756554135,2.85336096398862,2.08943262706204,3.42015292489498,2.98375015798635,3.10529061399878,0,0.546138611262131,0.889509253863555,0.426730222566507,0,1.14950487990897,0.661044872784862,1.90810750907073,1.70763890732835,0,0.382273228125229,0,0,1.05353633910031,0.590129310341499,1.17903228824749,1.23360899399706,1.83905144929746,0.32592226663359,0,0,1.55974639639243,0.883817722424512,1.55073726208535,0.812411591295047,2.30564375506215,3.51160238411671,4.43982342429925,2.48715016007264,0.869409257205157,0.444859689486181,0.535081656179426,1.04535523804977,2.03956816855619,0.766440987203842,1.37450978193052,1.51811815211702,0.318565414324097,1.30216690771284,0.950452044448374,0.150575119077773,0.383959833463255,0,0.947109008176067,0,0.604820229674197,2.13952156626806,1.01377082717959,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,5.51730569212962,4.00498395788315,7.44564578905645,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,4.85609409356116,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,1.72351904261178,3.51006397708857,3.41851673264075,0,0,0,0.447792613514241,0.290633938513962,1.91691339582606,0,0.704387472105808,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5948536769429,1.50677127429638,31.6250909224547,0,0,0,0,0,0,3.25046917581229,1.57624608161542,1.50939302401662,2.18183161675572,0,0,0,0,0,56.9245338199859,125.64781286569,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,3.8828556147351,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,2.29391162142713,4.5571774973933,2.85878130549347,1.64544909234478,1.94541993357815,1.62009431171434,7.13812658664843,0,0,1.22520107990516,1.30062222588003,0.28853842595289,0.569134746787313,0.797131363644112,1.79621434289535,0.957526850661834,0.211673582723883,0,1.40398589056729,3.19528550646469,2.0368386450493,0,1.52362600021443,1.76646882614069,2.42159648629257,1.27753871307098,4.12206413706918,1.84344458585075,0.447352215784832,1.16794399198336,1.17232857241224,0.278406173895242,0,0.540911356951966,0.66614393599564,0,0,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0.140669416410513,0,1.81284261649436,0,0.19924798825107,0.276283915531148,0,0,0.861593638227486,0,0,0,1.53471711068062,0.295930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,1.6156375993759,0,0,0.183195186803725,0.533034776018635,6.13159789174419,0.941881538370149,0.997270091400938,0,0,0.167821586975843,0,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0.988511511572023,0.939797545549098,0,0.802577647298789,0,1.45963831372533,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.959293472527256,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,2.62887354279315,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,2.7095466261051,0,0,0,0,0,4.49947783103001,3.0952078182318,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.427149650270779,0,2.48543433208317,1.48849806543585,0.988058159489721,1.82688897571344,0.638341257770182,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15929676716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| ||
|short_description=p8@LCP1 | |short_description=p8@LCP1 | ||
}} | }} |
Latest revision as of 13:28, 17 September 2015
Short description: | p8@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 324bp_to_BC015001_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.04e-57 | 98 |
blood island | 3.04e-57 | 98 |
hemolymphoid system | 1.23e-51 | 108 |
bone marrow | 8.25e-45 | 76 |
bone element | 2.73e-40 | 82 |
immune system | 7.33e-40 | 93 |
skeletal element | 3.27e-35 | 90 |
skeletal system | 5.01e-30 | 100 |
connective tissue | 8.71e-20 | 371 |
lateral plate mesoderm | 4.19e-17 | 203 |
blood | 1.71e-12 | 15 |
haemolymphatic fluid | 1.71e-12 | 15 |
organism substance | 1.71e-12 | 15 |
musculoskeletal system | 8.41e-12 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.10e-13 | 51 |
immune system cancer | 1.10e-13 | 51 |
lymphoma | 6.16e-11 | 10 |