FFCP PHASE1:Hg19::chr19:36245789..36245798,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36245789..36245798,- to FFCP PHASE1:Hg19::chr19:36245789..36245798,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126393 | |EntrezGene=126393 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=26511 | |HGNC=26511 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=408bp_to_AK026458_5end | |||
|cluster_id=chr19:36245789..36245798,- | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_20_at_HSPB6_5end | |||
|id=chr19:36245789..36245798,- | |||
|ontology_enrichment_celltype=CL:0000055!3.42e-14!180;CL:0000187!1.00e-13!54;CL:0000183!1.91e-13!59;CL:0000680!1.93e-12!57;CL:0000056!1.93e-12!57;CL:0000355!1.93e-12!57;CL:0000393!4.44e-12!60;CL:0000211!4.44e-12!60;CL:0000192!2.87e-11!42;CL:0000514!2.87e-11!42;CL:0002334!4.04e-08!12;CL:0000057!7.25e-08!75;CL:0000136!2.79e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002195;1.97e-09;2!CL:0002571;1.97e-09;2!CL:0002561;4.41e-09;2!CL:0002600;9.69e-09;2!CL:0002334;4.99e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.24e-09,2;CL:0002561,2.24e-09,2;CL:0002571,2.24e-09,2;CL:0002600,7.33e-09,2;CL:0002334,3.92e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.03e-13;3!DOID:127;1.03e-13;3!DOID:0060072;2.15e-10;4!DOID:114;4.41e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.54e-14,3;DOID:127,8.54e-14,3;DOID:0060072,1.88e-10,4;DOID:114,2.64e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002385!4.67e-16!63;UBERON:0001015!4.67e-16!63;UBERON:0000383!4.67e-16!63;UBERON:0001134!1.11e-15!61;UBERON:0002036!1.11e-15!61;UBERON:0003082!1.11e-15!61;UBERON:0004290!1.47e-14!70;UBERON:0000914!1.19e-12!83;UBERON:0002329!1.19e-12!83;UBERON:0003077!1.19e-12!83;UBERON:0003059!1.19e-12!83;UBERON:0007282!1.19e-12!83;UBERON:0009618!1.19e-12!83;UBERON:0007285!1.19e-12!83;UBERON:0000486!2.18e-12!82;UBERON:0005256!1.79e-08!143;UBERON:0002100!5.45e-08!216;UBERON:0007100!9.98e-08!27;UBERON:0004573!2.28e-07!33;UBERON:0004571!2.28e-07!33;UBERON:0007023!2.49e-07!115;UBERON:0001135!3.17e-07!15;UBERON:0000475!5.60e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.40e-11;9!UBERON:0000042;2.40e-11;9!UBERON:0003688;3.13e-11;6!UBERON:0002358;3.13e-11;6!UBERON:0003684;3.13e-11;6!UBERON:0001178;3.13e-11;6!UBERON:0005090;7.44e-10;2!UBERON:0001630;7.44e-10;2!UBERON:0005933;4.41e-09;2!UBERON:0005942;4.41e-09;2!UBERON:0005932;4.41e-09;2!UBERON:0002385;1.92e-07;31!UBERON:0001015;1.92e-07;31!UBERON:0000383;1.92e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.45e-11,6;UBERON:0002358,3.45e-11,6;UBERON:0003684,3.45e-11,6;UBERON:0001178,3.45e-11,6;UBERON:0005090,8.13e-10,2;UBERON:0001630,8.13e-10,2;UBERON:0002385,1.83e-09,64;UBERON:0001015,1.83e-09,64;UBERON:0000383,1.83e-09,64;UBERON:0005933,2.24e-09,2;UBERON:0005942,2.24e-09,2;UBERON:0005932,2.24e-09,2;UBERON:0004457,2.25e-08,12;UBERON:0000042,2.25e-08,12;UBERON:0001134,2.29e-08,62;UBERON:0002036,2.29e-08,62;UBERON:0003082,2.29e-08,62;UBERON:0002329,5.72e-07,71;UBERON:0003059,5.72e-07,71;UBERON:0007282,5.72e-07,71;UBERON:0004290,5.72e-07,71;UBERON:0009618,5.72e-07,71;UBERON:0003077,7.77e-07,72;UBERON:0007285,7.77e-07,72 | |||
|phase1_expression=0.181678379270557,0.428201047781966,2.25527046553554,2.00146596706261,0.893922188854576,0.872338524100369,0,0,1.82829939739887,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,1.46379839637152,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.255725123687061,0.722878304769133,0.50133791063589,0.724232594804119,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,0.286836620748814,0.709336764396714,0.560677600142307,0,0.24666754841716,0.622422070799533,0,0,0.151357427644931,0.576175924479999,0,0,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0.389748020644795,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,7.15312891703765,0,1.06375246633948,0,0.257207374262142,0,0.266422179016099,2.28764789853036,3.25572963234866,0,0,2.13235169245527,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,1.32845119707087,0.184369168541703,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0,1.73675465473144,0,1.40330047216537,1.66580894032411,0,2.2519548960105,1.48418066444991,0.308419387605311,0.710246901252508,0.410635780069046,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0,0,3.253918845081,0.94443704049192,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0.571890581771475,0.255897791311334,2.99557291623744,0.318203247925937,0,0.179872457583315,0.274537029736055,0.471249609382746,0.202182481573316,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0.136499911407986,0.848432591722276,0,0,0,0.876901770507525,1.15755106853338,1.9676842561399,0,0,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,2.11107635297664,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,3.21031058919516,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,1.0319161948297,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0.558564802544508,4.58320848023367,0,1.79711100449092,2.57535628881943,1.11585728720936,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,4.3439968140297,2.5926644736038,3.26587360109409,0,0,0.340776043570843,0,0,0,0.517131825446202,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,1.0027595760908,0.306345576763462,0,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,1.66441758450784,0.378806010550178,0,0,0.686520205190771,0.604923695052956,0,0,0,0,0.310525913752519,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.705351887381368,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,5.45832296228224,0,0,1.07140367175657,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0.348724276104376,0,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,4.53200186031526,1.53994210284371,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,2.45148321753905,0,0.392616934229891,0.297046400327086,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.639701945702943,0.476128862927481,0,0,0,0.0636471582781649,0.404234377916439,1.08858373948481,2.05339980651169,0,0.215166616178029,0.332660356546013,0,0,0,0,2.34640942403454,0.244482888365733,0.4068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| ||
|short_description=p20@HSPB6 | |||
}} | }} |
Latest revision as of 13:24, 17 September 2015
Short description: | p20@HSPB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_HSPB6_5end |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | 408bp_to_AK026458_5end |
EntrezGene: | HSPB6 |
HGNC: | 26511 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.24e-09 | 2 |
outer root sheath cell | 2.24e-09 | 2 |
hepatic mesenchymal stem cell | 2.24e-09 | 2 |
smooth muscle cell of trachea | 7.33e-09 | 2 |
preadipocyte | 3.92e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.45e-11 | 6 |
peritoneum | 3.45e-11 | 6 |
abdominal cavity | 3.45e-11 | 6 |
visceral peritoneum | 3.45e-11 | 6 |
muscle structure | 8.13e-10 | 2 |
muscle organ | 8.13e-10 | 2 |
muscle tissue | 1.83e-09 | 64 |
musculature | 1.83e-09 | 64 |
musculature of body | 1.83e-09 | 64 |
hair root sheath | 2.24e-09 | 2 |
hair outer root sheath | 2.24e-09 | 2 |
bulb of hair follicle | 2.24e-09 | 2 |
cavity lining | 2.25e-08 | 12 |
serous membrane | 2.25e-08 | 12 |
skeletal muscle tissue | 2.29e-08 | 62 |
striated muscle tissue | 2.29e-08 | 62 |
myotome | 2.29e-08 | 62 |
somite | 5.72e-07 | 71 |
presomitic mesoderm | 5.72e-07 | 71 |
presumptive segmental plate | 5.72e-07 | 71 |
dermomyotome | 5.72e-07 | 71 |
trunk paraxial mesoderm | 5.72e-07 | 71 |
paraxial mesoderm | 7.77e-07 | 72 |
presumptive paraxial mesoderm | 7.77e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.54e-14 | 3 |
leiomyoma | 8.54e-14 | 3 |
benign neoplasm | 1.88e-10 | 4 |
heart disease | 2.64e-09 | 2 |