FFCP PHASE1:Hg19::chr12:14720648..14720822,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79887 | |EntrezGene=79887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26215 | |HGNC=26215 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYQ3,Q6P4A8 | |UniProt=F5GYQ3,Q6P4A8 | ||
|association_with_transcript=0bp_to_ENST00000541618,NM_024829,uc001rcc.1_5end | |association_with_transcript=0bp_to_ENST00000541618,NM_024829,uc001rcc.1_5end | ||
|cluster_id=chr12:14720648..14720822,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_PLBD1_5end | |description=CAGE_peak_1_at_PLBD1_5end | ||
|id=chr12:14720648..14720822,- | |id=chr12:14720648..14720822,- | ||
|ontology_enrichment_celltype=CL:0002057!7.56e-27!42;CL:0000766!2.58e-25!76;CL:0002009!8.02e-25!65;CL:0002194!1.93e-24!63;CL:0000576!1.93e-24!63;CL:0000040!1.93e-24!63;CL:0000559!1.93e-24!63;CL:0000860!1.42e-22!45;CL:0000557!8.92e-21!71;CL:0000839!1.43e-18!70;CL:0000738!3.92e-11!140;CL:0000763!3.59e-10!112;CL:0000049!3.59e-10!112;CL:0002087!8.82e-09!119;CL:0000094!8.17e-07!8 | |ontology_enrichment_celltype=CL:0002057!7.56e-27!42;CL:0000766!2.58e-25!76;CL:0002009!8.02e-25!65;CL:0002194!1.93e-24!63;CL:0000576!1.93e-24!63;CL:0000040!1.93e-24!63;CL:0000559!1.93e-24!63;CL:0000860!1.42e-22!45;CL:0000557!8.92e-21!71;CL:0000839!1.43e-18!70;CL:0000738!3.92e-11!140;CL:0000763!3.59e-10!112;CL:0000049!3.59e-10!112;CL:0002087!8.82e-09!119;CL:0000094!8.17e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.99e-21;33!CL:0002057;3.99e-21;33!CL:0000473;8.19e-21;39!CL:0000234;8.19e-21;39!CL:0000576;4.83e-18;48!CL:0000766;3.89e-13;69!CL:0000094;4.51e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.10e-31,48;CL:0000234,1.10e-31,48;CL:0002009,8.08e-31,61;CL:0000766,1.14e-30,72;CL:0002194,1.78e-30,59;CL:0000576,1.78e-30,59;CL:0000040,1.78e-30,59;CL:0000559,1.78e-30,59;CL:0000860,4.59e-28,42;CL:0002057,4.59e-28,42;CL:0000557,1.47e-25,67;CL:0000839,2.64e-23,66;CL:0000763,1.82e-14,108;CL:0000049,1.82e-14,108;CL:0000738,1.38e-13,136;CL:0002087,4.96e-11,115;CL:0002031,8.03e-08,120;CL:0000094,4.56e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.73e-19!102;UBERON:0003061!3.73e-19!102;UBERON:0002371!1.37e-16!80;UBERON:0002193!5.87e-16!112;UBERON:0001474!4.32e-15!86;UBERON:0007023!3.22e-14!115;UBERON:0004765!2.08e-12!101;UBERON:0001434!2.08e-12!101;UBERON:0000062!1.04e-11!511;UBERON:0002405!5.17e-11!115;UBERON:0000922!3.61e-09!612;UBERON:0000926!4.91e-08!448;UBERON:0004120!4.91e-08!448;UBERON:0006603!4.91e-08!448;UBERON:0000468!6.89e-08!659;UBERON:0002050!7.56e-08!605;UBERON:0005423!7.56e-08!605;UBERON:0000923!1.22e-07!604;UBERON:0005291!1.22e-07!604;UBERON:0006598!1.22e-07!604;UBERON:0002532!1.22e-07!604;UBERON:0005409!1.39e-07!35;UBERON:0000160!7.09e-07!27 | |ontology_enrichment_uberon=UBERON:0002390!3.73e-19!102;UBERON:0003061!3.73e-19!102;UBERON:0002371!1.37e-16!80;UBERON:0002193!5.87e-16!112;UBERON:0001474!4.32e-15!86;UBERON:0007023!3.22e-14!115;UBERON:0004765!2.08e-12!101;UBERON:0001434!2.08e-12!101;UBERON:0000062!1.04e-11!511;UBERON:0002405!5.17e-11!115;UBERON:0000922!3.61e-09!612;UBERON:0000926!4.91e-08!448;UBERON:0004120!4.91e-08!448;UBERON:0006603!4.91e-08!448;UBERON:0000468!6.89e-08!659;UBERON:0002050!7.56e-08!605;UBERON:0005423!7.56e-08!605;UBERON:0000923!1.22e-07!604;UBERON:0005291!1.22e-07!604;UBERON:0006598!1.22e-07!604;UBERON:0002532!1.22e-07!604;UBERON:0005409!1.39e-07!35;UBERON:0000160!7.09e-07!27 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.60e-23,98;UBERON:0003061,1.60e-23,98;UBERON:0002371,1.49e-20,76;UBERON:0002193,8.75e-20,108;UBERON:0001474,1.45e-18,82;UBERON:0002405,7.42e-16,93;UBERON:0004765,1.79e-15,90;UBERON:0007023,4.08e-14,114;UBERON:0001434,8.90e-14,100;UBERON:0000922,2.41e-07,592 | |||
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| ||
|short_description=p1@PLBD1 | |short_description=p1@PLBD1 | ||
}} | }} |
Latest revision as of 13:23, 17 September 2015
Short description: | p1@PLBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLBD1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000541618, NM_024829, uc001rcc.1_5end |
EntrezGene: | PLBD1 |
HGNC: | 26215 |
UniProt: | F5GYQ3Q6P4A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.10e-31 | 48 |
phagocyte | 1.10e-31 | 48 |
macrophage dendritic cell progenitor | 8.08e-31 | 61 |
myeloid leukocyte | 1.14e-30 | 72 |
monopoietic cell | 1.78e-30 | 59 |
monocyte | 1.78e-30 | 59 |
monoblast | 1.78e-30 | 59 |
promonocyte | 1.78e-30 | 59 |
classical monocyte | 4.59e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.59e-28 | 42 |
granulocyte monocyte progenitor cell | 1.47e-25 | 67 |
myeloid lineage restricted progenitor cell | 2.64e-23 | 66 |
myeloid cell | 1.82e-14 | 108 |
common myeloid progenitor | 1.82e-14 | 108 |
leukocyte | 1.38e-13 | 136 |
nongranular leukocyte | 4.96e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 8.03e-08 | 120 |
granulocyte | 4.56e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.60e-23 | 98 |
blood island | 1.60e-23 | 98 |
bone marrow | 1.49e-20 | 76 |
hemolymphoid system | 8.75e-20 | 108 |
bone element | 1.45e-18 | 82 |
immune system | 7.42e-16 | 93 |
skeletal element | 1.79e-15 | 90 |
adult organism | 4.08e-14 | 114 |
skeletal system | 8.90e-14 | 100 |
embryo | 2.41e-07 | 592 |