FFCP PHASE1:Hg19::chr15:40707180..40707184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3712 | |EntrezGene=3712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6186 | |HGNC=6186 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-160bp_to_ENST00000497816,uc001zlr.2_5end | |association_with_transcript=-160bp_to_ENST00000497816,uc001zlr.2_5end | ||
|cluster_id=chr15:40707180..40707184,+ | |||
|description=CAGE_peak_2_at_IVD_5end | |description=CAGE_peak_2_at_IVD_5end | ||
|id=chr15:40707180..40707184,+ | |id=chr15:40707180..40707184,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;2.97e-19;1!CL:0002591;2.97e-19;1!CL:0002593;2.60e-10;2!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3!CL:0002567;2.71e-07;3!CL:0000307;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.88e-19,1;CL:0002591,3.91e-19,1;CL:0002593,3.58e-10,2;CL:0002567,2.19e-07,3;CL:0000346,2.79e-07,3;CL:1000428,2.79e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.60e-10;2!UBERON:0002012;2.60e-10;2!UBERON:0005406;2.60e-10;2!UBERON:0002456;2.60e-10;2!UBERON:0008886;2.60e-10;2!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.07e-10,2;UBERON:0000078,2.99e-10,2;UBERON:0007497,2.99e-10,2;UBERON:0003643,2.99e-10,2;UBERON:0003504,2.99e-10,2;UBERON:0003469,2.99e-10,2;UBERON:0003496,2.99e-10,2;UBERON:0002012,2.99e-10,2;UBERON:0008886,2.99e-10,2;UBERON:0007303,2.99e-10,2;UBERON:0002061,2.99e-10,2;UBERON:0005432,2.99e-10,2;UBERON:0004363,2.99e-10,2;UBERON:0002456,3.58e-10,2;UBERON:0000412,2.79e-07,3;UBERON:0001992,2.79e-07,3;UBERON:0004145,2.97e-07,3 | |||
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| ||
|short_description=p2@IVD | |short_description=p2@IVD | ||
}} | }} |
Latest revision as of 13:20, 17 September 2015
Short description: | p2@IVD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IVD_5end |
Coexpression cluster: | NA |
Association with transcript: | -160bp_to_ENST00000497816, uc001zlr.2_5end |
EntrezGene: | IVD |
HGNC: | 6186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.88e-19 | 1 |
smooth muscle cell of the pulmonary artery | 3.91e-19 | 1 |
smooth muscle cell of the internal thoracic artery | 3.58e-10 | 2 |
light melanocyte | 2.19e-07 | 3 |
hair follicle dermal papilla cell | 2.79e-07 | 3 |
stem cell of epidermis | 2.79e-07 | 3 |
duct epithelial cell | 3.16e-07 | 3 |
branched duct epithelial cell | 3.16e-07 | 3 |
tracheal epithelial cell | 3.16e-07 | 3 |
tracheoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.07e-10 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.99e-10 | 2 |
developing epithelial placode | 2.99e-10 | 2 |
respiratory system arterial blood vessel | 2.99e-10 | 2 |
respiratory system blood vessel | 2.99e-10 | 2 |
respiratory system artery | 2.99e-10 | 2 |
head blood vessel | 2.99e-10 | 2 |
pulmonary artery | 2.99e-10 | 2 |
pulmonary vascular system | 2.99e-10 | 2 |
pharyngeal vasculature | 2.99e-10 | 2 |
truncus arteriosus | 2.99e-10 | 2 |
aortic sac | 2.99e-10 | 2 |
pharyngeal arch artery | 2.99e-10 | 2 |
internal thoracic artery | 3.58e-10 | 2 |
dermal papilla | 2.79e-07 | 3 |
papillary layer of dermis | 2.79e-07 | 3 |
outflow tract | 2.97e-07 | 3 |