FFCP PHASE1:Hg19::chr8:22972215..22972223,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8794 | |EntrezGene=8794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11906 | |HGNC=11906 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=195bp_to_ENST00000518135_5end | |association_with_transcript=195bp_to_ENST00000518135_5end | ||
|cluster_id=chr8:22972215..22972223,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_TNFRSF10C_5end | |description=CAGE_peak_5_at_TNFRSF10C_5end | ||
|id=chr8:22972215..22972223,+ | |id=chr8:22972215..22972223,+ | ||
|ontology_enrichment_celltype=CL:0002139!8.40e-20!24;CL:0000071!8.27e-16!18;CL:0002546!8.27e-16!18;CL:0002078!1.14e-12!44;CL:0000115!4.76e-12!35;CL:0002057!1.22e-11!42;CL:0000860!1.59e-10!45;CL:0000766!3.41e-09!76;CL:0000775!1.19e-07!3;CL:0002543!1.72e-07!6;CL:0002144!4.41e-07!3;CL:0000094!5.06e-07!8;CL:0002194!9.50e-07!63;CL:0000576!9.50e-07!63;CL:0000040!9.50e-07!63;CL:0000559!9.50e-07!63 | |ontology_enrichment_celltype=CL:0002139!8.40e-20!24;CL:0000071!8.27e-16!18;CL:0002546!8.27e-16!18;CL:0002078!1.14e-12!44;CL:0000115!4.76e-12!35;CL:0002057!1.22e-11!42;CL:0000860!1.59e-10!45;CL:0000766!3.41e-09!76;CL:0000775!1.19e-07!3;CL:0002543!1.72e-07!6;CL:0002144!4.41e-07!3;CL:0000094!5.06e-07!8;CL:0002194!9.50e-07!63;CL:0000576!9.50e-07!63;CL:0000040!9.50e-07!63;CL:0000559!9.50e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000094;5.46e-37;8!CL:0000775;3.36e-36;3!CL:0000081;6.25e-27;11!CL:0000771;1.02e-24;2!CL:0002545;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.07e-37,8;CL:0000775,3.36e-36,3;CL:0000081,5.92e-27,11;CL:0000771,9.02e-25,2;CL:0002545,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.27e-16!18;UBERON:0004638!8.27e-16!18;UBERON:0004852!8.27e-16!18;UBERON:0000487!2.41e-14!22;UBERON:0006914!4.00e-14!25;UBERON:0003081!1.13e-11!216;UBERON:0002193!7.75e-11!112;UBERON:0000178!1.50e-10!15;UBERON:0000179!1.50e-10!15;UBERON:0000463!1.50e-10!15;UBERON:0002390!4.46e-09!102;UBERON:0003061!4.46e-09!102;UBERON:0004535!2.85e-08!110;UBERON:0001009!7.53e-08!113;UBERON:0001915!4.41e-07!3;UBERON:0001982!4.41e-07!3 | |ontology_enrichment_uberon=UBERON:0001986!8.27e-16!18;UBERON:0004638!8.27e-16!18;UBERON:0004852!8.27e-16!18;UBERON:0000487!2.41e-14!22;UBERON:0006914!4.00e-14!25;UBERON:0003081!1.13e-11!216;UBERON:0002193!7.75e-11!112;UBERON:0000178!1.50e-10!15;UBERON:0000179!1.50e-10!15;UBERON:0000463!1.50e-10!15;UBERON:0002390!4.46e-09!102;UBERON:0003061!4.46e-09!102;UBERON:0004535!2.85e-08!110;UBERON:0001009!7.53e-08!113;UBERON:0001915!4.41e-07!3;UBERON:0001982!4.41e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.33e-49;15!UBERON:0000179;4.33e-49;15!UBERON:0000463;4.33e-49;15!UBERON:0002390;2.05e-21;32!UBERON:0002193;2.30e-12;42!UBERON:0005800;4.83e-07;2!UBERON:0001515;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.33e-49,15;UBERON:0000179,4.33e-49,15;UBERON:0000463,4.33e-49,15;UBERON:0004535,1.64e-11,109;UBERON:0001009,3.66e-11,112;UBERON:0005800,4.42e-07,2;UBERON:0001515,4.42e-07,2;UBERON:0002390,9.65e-07,98;UBERON:0003061,9.65e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0,0,0,0.564727018627814,0,0.449446968890169,0.918251677112708,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.65156653411535,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,1.10047216776027,0.417989933073621,0,0,0.66944122552934,0.402829317109147,0.760272105718513,0.976248230192678,0,1.62028389576352,0.0892997282840798,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,3.9534125230819,11.6334079244498,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49007023947182,59.832291840805,2.07207756718018,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0.364182336013434,0,0,0.15403067420883,0,0,0.527758144464379,0,0.510281115829547,0,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,6.117097657139,19.3680043639215,1.90585420366231,1.23408681925858,5.83625980073446,3.24018862342869,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0,0,0.179515288819544,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.594092800654172,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0,0,0,0.564727018627814,0,0.449446968890169,0.918251677112708,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.65156653411535,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,1.10047216776027,0.417989933073621,0,0,0.66944122552934,0.402829317109147,0.760272105718513,0.976248230192678,0,1.62028389576352,0.0892997282840798,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,3.9534125230819,11.6334079244498,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49007023947182,59.832291840805,2.07207756718018,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0.364182336013434,0,0,0.15403067420883,0,0,0.527758144464379,0,0.510281115829547,0,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,6.117097657139,19.3680043639215,1.90585420366231,1.23408681925858,5.83625980073446,3.24018862342869,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0,0,0.179515288819544,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.594092800654172,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@TNFRSF10C | |short_description=p5@TNFRSF10C | ||
}} | }} |
Latest revision as of 13:20, 17 September 2015
Short description: | p5@TNFRSF10C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNFRSF10C_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 195bp_to_ENST00000518135_5end |
EntrezGene: | TNFRSF10C |
HGNC: | 11906 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.07e-37 | 8 |
neutrophil | 3.36e-36 | 3 |
blood cell | 5.92e-27 | 11 |
eosinophil | 9.02e-25 | 2 |
thoracic aorta endothelial cell | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.33e-49 | 15 |
haemolymphatic fluid | 4.33e-49 | 15 |
organism substance | 4.33e-49 | 15 |
cardiovascular system | 1.64e-11 | 109 |
circulatory system | 3.66e-11 | 112 |
segment of aorta | 4.42e-07 | 2 |
thoracic aorta | 4.42e-07 | 2 |
hematopoietic system | 9.65e-07 | 98 |
blood island | 9.65e-07 | 98 |