FFCP PHASE1:Hg19::chr17:7387677..7387691,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7387677..7387691,+
|short_description=p1@POLR2A
|description=CAGE_peak_1_at_POLR2A_5end
|association_with_transcript=-6bp_to_NM_000937_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5430 | |EntrezGene=5430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9187 | |HGNC=9187 | ||
|TSSclassifier=strong | |||
|UniProt=P24928 | |UniProt=P24928 | ||
|association_with_transcript=-6bp_to_NM_000937_5end | |||
|cluster_id=chr17:7387677..7387691,+ | |||
|description=CAGE_peak_1_at_POLR2A_5end | |||
|id=chr17:7387677..7387691,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.33e-15!42;CL:0000860!1.01e-13!45;CL:0000766!2.85e-12!76;CL:0000763!1.12e-11!112;CL:0000049!1.12e-11!112;CL:0000988!1.13e-10!182;CL:0000738!4.54e-10!140;CL:0000557!1.14e-09!71;CL:0000037!1.31e-09!172;CL:0000566!1.31e-09!172;CL:0002009!8.95e-09!65;CL:0000839!1.15e-08!70;CL:0002032!1.61e-08!165;CL:0000837!1.61e-08!165;CL:0002194!6.05e-08!63;CL:0000576!6.05e-08!63;CL:0000040!6.05e-08!63;CL:0000559!6.05e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.05e-15;33!CL:0002057;6.05e-15;33!CL:0000473;2.34e-09;39!CL:0000234;2.34e-09;39!CL:0000576;4.53e-07;48!CL:0000766;5.03e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.33e-15,42;CL:0002057,2.33e-15,42;CL:0000766,4.18e-13,72;CL:0000763,3.05e-12,108;CL:0000049,3.05e-12,108;CL:0000473,5.68e-12,48;CL:0000234,5.68e-12,48;CL:0000988,6.18e-11,177;CL:0000738,1.78e-10,136;CL:0000557,2.23e-10,67;CL:0000037,6.11e-10,168;CL:0002009,1.78e-09,61;CL:0000839,2.57e-09,66;CL:0002032,7.90e-09,161;CL:0000837,7.90e-09,161;CL:0002194,1.34e-08,59;CL:0000576,1.34e-08,59;CL:0000040,1.34e-08,59;CL:0000559,1.34e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.40e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-09!102;UBERON:0003061!1.30e-09!102;UBERON:0001474!1.91e-09!86;UBERON:0002371!4.13e-09!80;UBERON:0002193!6.27e-09!112;UBERON:0003081!1.64e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.97e-10,98;UBERON:0003061,3.97e-10,98;UBERON:0001474,4.94e-10,82;UBERON:0002371,1.03e-09,76;UBERON:0002405,1.57e-09,93;UBERON:0002193,2.26e-09,108;UBERON:0003081,4.35e-09,203;UBERON:0004765,1.35e-07,90 | |||
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| ||
|short_description=p1@POLR2A | |||
}} | }} |
Latest revision as of 13:16, 17 September 2015
Short description: | p1@POLR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POLR2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_NM_000937_5end |
EntrezGene: | POLR2A |
HGNC: | 9187 |
UniProt: | P24928 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.33e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-15 | 42 |
myeloid leukocyte | 4.18e-13 | 72 |
myeloid cell | 3.05e-12 | 108 |
common myeloid progenitor | 3.05e-12 | 108 |
defensive cell | 5.68e-12 | 48 |
phagocyte | 5.68e-12 | 48 |
hematopoietic cell | 6.18e-11 | 177 |
leukocyte | 1.78e-10 | 136 |
granulocyte monocyte progenitor cell | 2.23e-10 | 67 |
hematopoietic stem cell | 6.11e-10 | 168 |
macrophage dendritic cell progenitor | 1.78e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.57e-09 | 66 |
hematopoietic oligopotent progenitor cell | 7.90e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.90e-09 | 161 |
monopoietic cell | 1.34e-08 | 59 |
monocyte | 1.34e-08 | 59 |
monoblast | 1.34e-08 | 59 |
promonocyte | 1.34e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.97e-10 | 98 |
blood island | 3.97e-10 | 98 |
bone element | 4.94e-10 | 82 |
bone marrow | 1.03e-09 | 76 |
immune system | 1.57e-09 | 93 |
hemolymphoid system | 2.26e-09 | 108 |
lateral plate mesoderm | 4.35e-09 | 203 |
skeletal element | 1.35e-07 | 90 |