FFCP PHASE1:Hg19::chr19:36239489..36239506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55957 | |EntrezGene=55957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33234 | |HGNC=33234 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GY3 | |UniProt=Q96GY3 | ||
|association_with_transcript=-5bp_to_ENST00000301159,uc002obm.2_5end | |association_with_transcript=-5bp_to_ENST00000301159,uc002obm.2_5end | ||
|cluster_id=chr19:36239489..36239506,+ | |||
|description=CAGE_peak_2_at_LIN37_5end | |description=CAGE_peak_2_at_LIN37_5end | ||
|id=chr19:36239489..36239506,+ | |id=chr19:36239489..36239506,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.81e-11!180;CL:0000359!1.31e-09!32;CL:0000183!1.92e-08!59;CL:0000192!3.43e-08!42;CL:0000514!3.43e-08!42;CL:0000680!7.48e-08!57;CL:0000056!7.48e-08!57;CL:0000355!7.48e-08!57;CL:0000187!1.27e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.81e-11!180;CL:0000359!1.31e-09!32;CL:0000183!1.92e-08!59;CL:0000192!3.43e-08!42;CL:0000514!3.43e-08!42;CL:0000680!7.48e-08!57;CL:0000056!7.48e-08!57;CL:0000355!7.48e-08!57;CL:0000187!1.27e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.16e-09;32 | |ontology_enrichment_celltype_v019=CL:0000359;4.16e-09;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.31e-09,32;CL:0000192,2.63e-08,43;CL:0000514,2.63e-08,43;CL:0000680,5.46e-08,58;CL:0000056,5.46e-08,58;CL:0000355,5.46e-08,58;CL:0000187,9.28e-08,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.35e-13!365;UBERON:0000468!6.18e-13!659;UBERON:0000119!1.10e-12!312;UBERON:0000483!3.32e-12!309;UBERON:0000467!4.10e-12!625;UBERON:0000480!7.63e-12!626;UBERON:0000914!1.28e-11!83;UBERON:0002329!1.28e-11!83;UBERON:0003077!1.28e-11!83;UBERON:0003059!1.28e-11!83;UBERON:0007282!1.28e-11!83;UBERON:0009618!1.28e-11!83;UBERON:0007285!1.28e-11!83;UBERON:0000486!3.19e-11!82;UBERON:0004290!3.06e-10!70;UBERON:0001637!2.99e-09!42;UBERON:0003509!2.99e-09!42;UBERON:0004572!2.99e-09!42;UBERON:0002049!3.49e-09!79;UBERON:0007798!3.49e-09!79;UBERON:0005256!3.99e-09!143;UBERON:0001981!1.01e-08!60;UBERON:0007500!1.01e-08!60;UBERON:0004537!1.01e-08!60;UBERON:0006965!1.01e-08!60;UBERON:0002100!1.23e-08!216;UBERON:0001134!1.41e-08!61;UBERON:0002036!1.41e-08!61;UBERON:0003082!1.41e-08!61;UBERON:0000923!1.63e-08!604;UBERON:0005291!1.63e-08!604;UBERON:0006598!1.63e-08!604;UBERON:0002532!1.63e-08!604;UBERON:0002050!2.07e-08!605;UBERON:0005423!2.07e-08!605;UBERON:0002385!2.47e-08!63;UBERON:0001015!2.47e-08!63;UBERON:0000383!2.47e-08!63;UBERON:0004872!3.43e-08!84;UBERON:0000025!6.35e-08!194;UBERON:0000055!7.08e-08!69;UBERON:0000922!8.39e-08!612;UBERON:0004111!3.88e-07!241;UBERON:0000481!4.63e-07!347 | |ontology_enrichment_uberon=UBERON:0000475!1.35e-13!365;UBERON:0000468!6.18e-13!659;UBERON:0000119!1.10e-12!312;UBERON:0000483!3.32e-12!309;UBERON:0000467!4.10e-12!625;UBERON:0000480!7.63e-12!626;UBERON:0000914!1.28e-11!83;UBERON:0002329!1.28e-11!83;UBERON:0003077!1.28e-11!83;UBERON:0003059!1.28e-11!83;UBERON:0007282!1.28e-11!83;UBERON:0009618!1.28e-11!83;UBERON:0007285!1.28e-11!83;UBERON:0000486!3.19e-11!82;UBERON:0004290!3.06e-10!70;UBERON:0001637!2.99e-09!42;UBERON:0003509!2.99e-09!42;UBERON:0004572!2.99e-09!42;UBERON:0002049!3.49e-09!79;UBERON:0007798!3.49e-09!79;UBERON:0005256!3.99e-09!143;UBERON:0001981!1.01e-08!60;UBERON:0007500!1.01e-08!60;UBERON:0004537!1.01e-08!60;UBERON:0006965!1.01e-08!60;UBERON:0002100!1.23e-08!216;UBERON:0001134!1.41e-08!61;UBERON:0002036!1.41e-08!61;UBERON:0003082!1.41e-08!61;UBERON:0000923!1.63e-08!604;UBERON:0005291!1.63e-08!604;UBERON:0006598!1.63e-08!604;UBERON:0002532!1.63e-08!604;UBERON:0002050!2.07e-08!605;UBERON:0005423!2.07e-08!605;UBERON:0002385!2.47e-08!63;UBERON:0001015!2.47e-08!63;UBERON:0000383!2.47e-08!63;UBERON:0004872!3.43e-08!84;UBERON:0000025!6.35e-08!194;UBERON:0000055!7.08e-08!69;UBERON:0000922!8.39e-08!612;UBERON:0004111!3.88e-07!241;UBERON:0000481!4.63e-07!347 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p2@LIN37 | |short_description=p2@LIN37 | ||
}} | }} |
Latest revision as of 13:15, 17 September 2015
Short description: | p2@LIN37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LIN37_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000301159, uc002obm.2_5end |
EntrezGene: | LIN37 |
HGNC: | 33234 |
UniProt: | Q96GY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.31e-09 | 32 |
smooth muscle cell | 2.63e-08 | 43 |
smooth muscle myoblast | 2.63e-08 | 43 |
muscle precursor cell | 5.46e-08 | 58 |
myoblast | 5.46e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.46e-08 | 58 |
muscle cell | 9.28e-08 | 55 |