FFCP PHASE1:Hg19::chr1:15573757..15573785,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114827 | |EntrezGene=114827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29408 | |HGNC=29408 | ||
|TSSclassifier=strong | |||
|UniProt=B1AJZ9,E9PQ17,B1AJZ8 | |UniProt=B1AJZ9,E9PQ17,B1AJZ8 | ||
|association_with_transcript=0bp_to_ENST00000358897,ENST00000375999,ENST00000417793,ENST00000433640,ENST00000436024,NM_052929,uc001awa.1,uc001awb.2_5end | |association_with_transcript=0bp_to_ENST00000358897,ENST00000375999,ENST00000417793,ENST00000433640,ENST00000436024,NM_052929,uc001awa.1,uc001awb.2_5end | ||
|cluster_id=chr1:15573757..15573785,+ | |||
|description=CAGE_peak_2_at_FHAD1_5end | |description=CAGE_peak_2_at_FHAD1_5end | ||
|id=chr1:15573757..15573785,+ | |id=chr1:15573757..15573785,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.09e-25!42;CL:0000860!3.74e-23!45;CL:0002009!1.87e-21!65;CL:0002194!5.86e-20!63;CL:0000576!5.86e-20!63;CL:0000040!5.86e-20!63;CL:0000559!5.86e-20!63;CL:0000557!1.78e-19!71;CL:0000839!1.29e-17!70;CL:0000766!2.13e-17!76;CL:0000763!5.12e-09!112;CL:0000049!5.12e-09!112;CL:0002031!5.59e-09!124;CL:0002087!9.37e-09!119;CL:0000738!3.61e-08!140 | |ontology_enrichment_celltype=CL:0002057!1.09e-25!42;CL:0000860!3.74e-23!45;CL:0002009!1.87e-21!65;CL:0002194!5.86e-20!63;CL:0000576!5.86e-20!63;CL:0000040!5.86e-20!63;CL:0000559!5.86e-20!63;CL:0000557!1.78e-19!71;CL:0000839!1.29e-17!70;CL:0000766!2.13e-17!76;CL:0000763!5.12e-09!112;CL:0000049!5.12e-09!112;CL:0002031!5.59e-09!124;CL:0002087!9.37e-09!119;CL:0000738!3.61e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-37;33!CL:0002057;1.55e-37;33!CL:0000473;1.44e-27;39!CL:0000234;1.44e-27;39!CL:0000576;5.74e-22;48!CL:0000766;1.28e-08;69!CL:0000763;1.94e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.17e-31,42;CL:0002057,5.17e-31,42;CL:0000473,4.67e-30,48;CL:0000234,4.67e-30,48;CL:0002194,5.36e-26,59;CL:0000576,5.36e-26,59;CL:0000040,5.36e-26,59;CL:0000559,5.36e-26,59;CL:0002009,5.13e-25,61;CL:0000839,8.04e-23,66;CL:0000557,2.02e-22,67;CL:0000766,1.39e-20,72;CL:0000763,2.34e-12,108;CL:0000049,2.34e-12,108;CL:0002087,2.35e-11,115;CL:0002031,1.03e-10,120;CL:0000738,5.64e-09,136;CL:0002032,5.76e-07,161;CL:0000837,5.76e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-21;42 | |||
|ontology_enrichment_disease=DOID:305!4.78e-07!106 | |ontology_enrichment_disease=DOID:305!4.78e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.70e-16!80;UBERON:0001474!1.02e-13!86;UBERON:0002405!4.41e-11!115;UBERON:0002390!6.62e-11!102;UBERON:0003061!6.62e-11!102;UBERON:0002193!6.36e-10!112;UBERON:0004765!7.84e-10!101;UBERON:0001434!7.84e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.03e-07;3!UBERON:0005290;3.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.75e-19,76;UBERON:0001474,1.41e-17,82;UBERON:0004765,1.19e-15,90;UBERON:0002405,5.17e-15,93;UBERON:0002390,4.89e-14,98;UBERON:0003061,4.89e-14,98;UBERON:0001434,1.13e-13,100;UBERON:0002193,2.34e-12,108;UBERON:0001896,3.45e-07,3;UBERON:0005290,3.45e-07,3;UBERON:0010096,3.45e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,1.28787783817093,2.03557534291391,4.1566353805769,2.42584061187816,0.232429036905685,0.822335776043652,0.929119112685311,2.58923153089935,12.0395532068677,3.07426898855161,0,1.93645405075148,0,0.376484679085209,2.45615535052061,0.898893937780338,1.22433556948361,1.60464513538047,1.27867425159808,4.28806690242731,11.369428484433,5.96714650745772,0,0,0.622822248995575,2.00998932205395,7.82224377630302,2.17188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,4.1913304159268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.641715181398742,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,1.47787785689595,0.597743964753209,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.7812832832557,0,0,0.1137934482855,0.762760950878299,0.709163045303809,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,1.46988596121566,0.174118413160805,1.22308667769421,0,0,0,0,0,0,0.225980740780532,0,0,0,1.75996244461323,0.160317640503067,0.426905989478705,0.39961921916426,2.01726584015748,0.229073192331831,1.02956998717179,0,0,0.471388069233591,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0.160753148465019,0.275078873194468,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,1.13312091520126,0.146552233678082,0,0.517131825446202,0.13223260174269,0,3.52407511158336,0.213574825135389,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,1.14681839138014,1.22021956690538,0.18628920882415,0.276697269872462,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0,0,0.115525666150338,0,0,0,0.451261970095544,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,3.03482802118316,0,0,0.345701962667338,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.428859265059938,0,2.32482850736251,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0.782988022584546,0.196300467230486,0.121917924982269,0,0,0,0.485710993059139,0,0.994753875806841,0.118920090777569,0,0,0.905777061400041,0.231522474323834,0.655678681511872,2.35158648180761,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.320965466756673,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,1.0135880080915,0.101988829741982,0,0,0,6.97164023607803,8.30688803484153,0,0.20686599172379,0,1.1903221573187,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,1.07583308089015,0.99798106963804,0.488419611665847,0,0,0,0,0,0.813792356631477,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,1.28787783817093,2.03557534291391,4.1566353805769,2.42584061187816,0.232429036905685,0.822335776043652,0.929119112685311,2.58923153089935,12.0395532068677,3.07426898855161,0,1.93645405075148,0,0.376484679085209,2.45615535052061,0.898893937780338,1.22433556948361,1.60464513538047,1.27867425159808,4.28806690242731,11.369428484433,5.96714650745772,0,0,0.622822248995575,2.00998932205395,7.82224377630302,2.17188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,4.1913304159268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.641715181398742,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,1.47787785689595,0.597743964753209,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.7812832832557,0,0,0.1137934482855,0.762760950878299,0.709163045303809,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,1.46988596121566,0.174118413160805,1.22308667769421,0,0,0,0,0,0,0.225980740780532,0,0,0,1.75996244461323,0.160317640503067,0.426905989478705,0.39961921916426,2.01726584015748,0.229073192331831,1.02956998717179,0,0,0.471388069233591,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0.160753148465019,0.275078873194468,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,1.13312091520126,0.146552233678082,0,0.517131825446202,0.13223260174269,0,3.52407511158336,0.213574825135389,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,1.14681839138014,1.22021956690538,0.18628920882415,0.276697269872462,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0,0,0.115525666150338,0,0,0,0.451261970095544,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,3.03482802118316,0,0,0.345701962667338,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.428859265059938,0,2.32482850736251,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0.782988022584546,0.196300467230486,0.121917924982269,0,0,0,0.485710993059139,0,0.994753875806841,0.118920090777569,0,0,0.905777061400041,0.231522474323834,0.655678681511872,2.35158648180761,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.320965466756673,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,1.0135880080915,0.101988829741982,0,0,0,6.97164023607803,8.30688803484153,0,0.20686599172379,0,1.1903221573187,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,1.07583308089015,0.99798106963804,0.488419611665847,0,0,0,0,0,0.813792356631477,0,0,0.320568492303233 | ||
|short_description=p2@FHAD1 | |short_description=p2@FHAD1 | ||
}} | }} |
Latest revision as of 13:14, 17 September 2015
Short description: | p2@FHAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FHAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358897, ENST00000375999, ENST00000417793, ENST00000433640, ENST00000436024, NM_052929, uc001awa.1, uc001awb.2_5end |
EntrezGene: | FHAD1 |
HGNC: | 29408 |
UniProt: | B1AJZ9E9PQ17B1AJZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.17e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.17e-31 | 42 |
defensive cell | 4.67e-30 | 48 |
phagocyte | 4.67e-30 | 48 |
monopoietic cell | 5.36e-26 | 59 |
monocyte | 5.36e-26 | 59 |
monoblast | 5.36e-26 | 59 |
promonocyte | 5.36e-26 | 59 |
macrophage dendritic cell progenitor | 5.13e-25 | 61 |
myeloid lineage restricted progenitor cell | 8.04e-23 | 66 |
granulocyte monocyte progenitor cell | 2.02e-22 | 67 |
myeloid leukocyte | 1.39e-20 | 72 |
myeloid cell | 2.34e-12 | 108 |
common myeloid progenitor | 2.34e-12 | 108 |
nongranular leukocyte | 2.35e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.03e-10 | 120 |
leukocyte | 5.64e-09 | 136 |
hematopoietic oligopotent progenitor cell | 5.76e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.75e-19 | 76 |
bone element | 1.41e-17 | 82 |
skeletal element | 1.19e-15 | 90 |
immune system | 5.17e-15 | 93 |
hematopoietic system | 4.89e-14 | 98 |
blood island | 4.89e-14 | 98 |
skeletal system | 1.13e-13 | 100 |
hemolymphoid system | 2.34e-12 | 108 |
medulla oblongata | 3.45e-07 | 3 |
myelencephalon | 3.45e-07 | 3 |
future myelencephalon | 3.45e-07 | 3 |