FFCP PHASE1:Hg19::chr12:14538205..14538305,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55729 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20092 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000541654,uc001rby.3,uc010sht.1_5end | |||
|cluster_id=chr12:14538205..14538305,+ | |||
|description=CAGE_peak_2_at_ATF7IP_5end | |||
|id=chr12:14538205..14538305,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.39e-14!53;CL:0000051!2.39e-14!53;CL:0000838!4.80e-14!52;CL:0000084!2.53e-11!25;CL:0000827!2.53e-11!25;CL:0000791!5.15e-11!18;CL:0000789!5.15e-11!18;CL:0002420!5.15e-11!18;CL:0002419!5.15e-11!18;CL:0000790!5.15e-11!18;CL:0000625!4.59e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.09e-11;25!CL:0000791;2.92e-11;18!CL:0000789;2.92e-11;18!CL:0002419;2.92e-11;18!CL:0000625;2.76e-08;11!CL:0000542;3.44e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.32e-14,53;CL:0000051,1.32e-14,53;CL:0000838,2.71e-14,52;CL:0000084,1.44e-11,25;CL:0000827,1.44e-11,25;CL:0000791,2.72e-11,18;CL:0000789,2.72e-11,18;CL:0002420,2.72e-11,18;CL:0002419,2.72e-11,18;CL:0000790,2.72e-11,18;CL:0000625,2.96e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.92e-11;18!CL:0000051;3.44e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-17!115;UBERON:0005743!2.18e-09!86;UBERON:0001017!3.35e-09!82;UBERON:0000073!4.34e-09!94;UBERON:0001016!4.34e-09!94;UBERON:0000955!1.40e-08!69;UBERON:0006238!1.40e-08!69;UBERON:0003075!1.41e-07!86;UBERON:0007284!1.41e-07!86;UBERON:0000178!1.67e-07!15;UBERON:0000179!1.67e-07!15;UBERON:0000463!1.67e-07!15;UBERON:0002346!4.12e-07!90;UBERON:0002616!5.11e-07!59;UBERON:0001049!6.61e-07!57;UBERON:0005068!6.61e-07!57;UBERON:0006241!6.61e-07!57;UBERON:0007135!6.61e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.42e-08;15!UBERON:0000179;6.42e-08;15!UBERON:0000463;6.42e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.00e-17,114;UBERON:0001017,2.78e-09,81;UBERON:0001016,3.43e-09,89;UBERON:0000955,1.37e-08,68;UBERON:0006238,1.37e-08,68;UBERON:0000178,6.74e-08,15;UBERON:0000179,6.74e-08,15;UBERON:0000463,6.74e-08,15;UBERON:0001049,4.30e-07,56;UBERON:0005068,4.30e-07,56;UBERON:0006241,4.30e-07,56;UBERON:0007135,4.30e-07,56;UBERON:0003075,6.35e-07,82;UBERON:0007284,6.35e-07,82 | |||
|phase1_expression=3.99692434395225,4.49611100171065,3.66481450649525,1.0007329835313,1.78784437770915,0.872338524100369,0,3.15859936713415,1.82829939739887,0,0,0.873765488520689,1.05506791291381,4.20805600064159,0.662794751455832,0,0,0.730310090387373,0,2.33930010345897,1.22400414746552,0.626909442956176,6.5834277040143,4.79060487755095,2.51085279189606,28.8078539669776,31.0340228120795,32.3501311199222,3.14691421479123,27.6357166629993,2.94150634300544,0.919421224478927,0.6024118375565,0.369754010166788,52.5227619934445,44.6411390010504,2.64240395401362,2.21598163412751,2.60707781711184,2.60413044859022,2.46307021663917,6.47787332037959,4.12120908214698,0.726991193897824,0.755751887377619,0.242584061187816,0.464858073811369,0.822335776043652,0.619412741790207,0.575384784644301,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,0.752969358170419,0.545812300115692,1.12361742222542,0.612167784741805,2.24650318953266,0.639337125799041,0,0.797854630486527,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,0.502497330513487,2.60741459210101,0.65156653411535,1.21079900526674,1.47311054395026,0.316462387440884,1.05627643155971,1.06302149982522,1.88692780957538,0.786300418025466,0.750884464207532,1.6072558669708,1.42506371870624,0.59675003159727,0.730656615058536,3.51992488922645,3.82297027883492,0.889509253863555,1.28019066769952,1.20118796110804,4.02326707968138,2.64417949113945,0,2.27685187643779,2.93618594685469,2.29363936875137,3.96513985737078,2.24203425192614,4.21414535640123,16.1302011493343,11.3973121197258,13.7753004329671,18.8920739791466,5.86660079940463,5.6813736688168,7.79306913631645,28.1868455919489,16.7925367260657,23.2610589312802,30.8716404692118,11.9124927344878,11.3151632377094,13.9772218913125,8.5668505513613,21.7352314301289,13.4940772477475,12.0393372640371,5.22677619024884,26.0611488204402,21.8435681353095,29.5519603115062,54.3992337841931,30.2637143607892,33.8563396005338,26.6126572445545,15.8103875031661,23.1655766189497,51.2215978864618,32.2017062779863,27.9183518953156,23.7895957005184,16.5812921385775,11.7307767145067,7.31420598941885,2.68280343881454,1.53435074212236,0.722878304769133,2.00535164254356,2.462390822334,9.54343136461319,1.45990461090791,18.2452197126651,9.53436409089025,7.64162635530197,5.6975897841505,0.728590576585084,0.370784442784429,3.8945687238562,3.30846500868608,2.12732736830184,6.67773748054957,6.29194401858141,3.34311751196608,0.39752481473341,0,1.04142150482278,0.56530794192401,0.838998872419812,0.550236083880135,0.208994966536811,0,0.35576626268671,0.66944122552934,0.805658634218294,3.04108842287405,0,1.10298924103761,0,7.14397826272638,5.38870494302808,2.92789849256638,0,0,0.549605231791222,0,7.75560528296651,0.872188104285069,0.993943903390637,2.5326102332916,5.69359477496841,3.15520282823695,0.709336764396714,0.560677600142307,2.1349799145941,0.74000264525148,7.15785381419462,2.2900814251847,1.79808093424805,3.63257826347835,6.91411109375999,2.34321431833797,0.624320153660641,0.570471821544449,0.597794722207204,1.40921398372518,0.971237666208789,1.68540968042698,4.28723759635276,2.7023549808589,2.6864703105699,0,0.741800787835671,0.910161361938026,2.15585442544872,2.69337782326506,2.25213335769535,4.15596173226274,3.5118209670467,1.83892677479412,0.45071417671979,2.60894021268048,2.33206526395521,1.06778694409284,1.48352330811693,1.80054657650641,2.16410311400722,1.54584324027377,2.04728541964749,3.37552664482532,1.26668106709558,4.03894038790583,2.94559675655358,3.39456719319505,2.13005755509969,1.41052937518696,2.37384829234683,0.386521706326594,1.09098448236334,0.286804595389004,0.487894824518382,0.265059536642971,0.813357600086629,1.7622379352613,3.28017106138317,1.82488679537915,3.12899064659632,1.92972281457866,0,3.25057549622385,1.44375896333917,0.354920400119532,0,0.241011029883482,0.772057809126758,0.217879444092406,0,0,0.196221465125346,0,0,0,2.8810180793198,0,2.53510069643662,0,1.18157981336281,24.7219335672204,3.93563003337963,5.66173773985134,2.08525542276389,0,0.804231779293047,3.70353780634118,0.977424915930974,0,2.88662684050547,6.37617227362923,8.92306076192245,1.73239737313289,0,0.380508304469197,1.58040879591855,1.71697232418975,3.20082107913617,5.38209809820247,2.37809859661965,0.93733833986777,2.18376766658517,1.41775097242386,2.32852159027406,1.74380363108377,1.15014803749563,5.41929561685538,4.49047013467453,2.07328115540772,2.01767934783746,2.77733353538036,2.98440103173194,1.14596527667483,0,0,0.514137463516618,2.10240140490742,1.71495859578347,2.13049060256185,0.87192013766656,3.9602674343313,2.71470603091333,3.57656445851882,0.845302752556,1.32969058292435,2.08014873822732,1.02882949704857,1.41849132023278,0.532844358032199,2.14466990487221,1.08524321078289,4.11620168390384,1.62868092146868,1.42156779497018,1.58390374586686,5.42590878707255,2.61460037580088,6.09835246210548,0,2.51128545716063,0,3.59437283237374,1.14861935834114,0,3.18518874668674,1.64381058040307,3.58121926479791,7.50970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| |||
|short_description=p2@ATF7IP | |||
}} |
Latest revision as of 13:13, 17 September 2015
Short description: | p2@ATF7IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATF7IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000541654, uc001rby.3, uc010sht.1_5end |
EntrezGene: | ATF7IP |
HGNC: | 20092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.32e-14 | 53 |
common lymphoid progenitor | 1.32e-14 | 53 |
lymphoid lineage restricted progenitor cell | 2.71e-14 | 52 |
T cell | 1.44e-11 | 25 |
pro-T cell | 1.44e-11 | 25 |
mature alpha-beta T cell | 2.72e-11 | 18 |
alpha-beta T cell | 2.72e-11 | 18 |
immature T cell | 2.72e-11 | 18 |
mature T cell | 2.72e-11 | 18 |
immature alpha-beta T cell | 2.72e-11 | 18 |
CD8-positive, alpha-beta T cell | 2.96e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.00e-17 | 114 |
central nervous system | 2.78e-09 | 81 |
nervous system | 3.43e-09 | 89 |
brain | 1.37e-08 | 68 |
future brain | 1.37e-08 | 68 |
blood | 6.74e-08 | 15 |
haemolymphatic fluid | 6.74e-08 | 15 |
organism substance | 6.74e-08 | 15 |
neural tube | 4.30e-07 | 56 |
neural rod | 4.30e-07 | 56 |
future spinal cord | 4.30e-07 | 56 |
neural keel | 4.30e-07 | 56 |
neural plate | 6.35e-07 | 82 |
presumptive neural plate | 6.35e-07 | 82 |