FFCP PHASE1:Hg19::chr12:14538205..14538305,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55729 | |EntrezGene=55729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20092 | |HGNC=20092 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000541654,uc001rby.3,uc010sht.1_5end | |association_with_transcript=0bp_to_ENST00000541654,uc001rby.3,uc010sht.1_5end | ||
|cluster_id=chr12:14538205..14538305,+ | |||
|description=CAGE_peak_2_at_ATF7IP_5end | |description=CAGE_peak_2_at_ATF7IP_5end | ||
|id=chr12:14538205..14538305,+ | |id=chr12:14538205..14538305,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.39e-14!53;CL:0000051!2.39e-14!53;CL:0000838!4.80e-14!52;CL:0000084!2.53e-11!25;CL:0000827!2.53e-11!25;CL:0000791!5.15e-11!18;CL:0000789!5.15e-11!18;CL:0002420!5.15e-11!18;CL:0002419!5.15e-11!18;CL:0000790!5.15e-11!18;CL:0000625!4.59e-08!11 | |ontology_enrichment_celltype=CL:0000542!2.39e-14!53;CL:0000051!2.39e-14!53;CL:0000838!4.80e-14!52;CL:0000084!2.53e-11!25;CL:0000827!2.53e-11!25;CL:0000791!5.15e-11!18;CL:0000789!5.15e-11!18;CL:0002420!5.15e-11!18;CL:0002419!5.15e-11!18;CL:0000790!5.15e-11!18;CL:0000625!4.59e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.09e-11;25!CL:0000791;2.92e-11;18!CL:0000789;2.92e-11;18!CL:0002419;2.92e-11;18!CL:0000625;2.76e-08;11!CL:0000542;3.44e-08;53 | |ontology_enrichment_celltype_v019=CL:0000084;1.09e-11;25!CL:0000791;2.92e-11;18!CL:0000789;2.92e-11;18!CL:0002419;2.92e-11;18!CL:0000625;2.76e-08;11!CL:0000542;3.44e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.32e-14,53;CL:0000051,1.32e-14,53;CL:0000838,2.71e-14,52;CL:0000084,1.44e-11,25;CL:0000827,1.44e-11,25;CL:0000791,2.72e-11,18;CL:0000789,2.72e-11,18;CL:0002420,2.72e-11,18;CL:0002419,2.72e-11,18;CL:0000790,2.72e-11,18;CL:0000625,2.96e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.92e-11;18!CL:0000051;3.44e-08;53 | |ontology_enrichment_development_v019=CL:0000790;2.92e-11;18!CL:0000051;3.44e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-17!115;UBERON:0005743!2.18e-09!86;UBERON:0001017!3.35e-09!82;UBERON:0000073!4.34e-09!94;UBERON:0001016!4.34e-09!94;UBERON:0000955!1.40e-08!69;UBERON:0006238!1.40e-08!69;UBERON:0003075!1.41e-07!86;UBERON:0007284!1.41e-07!86;UBERON:0000178!1.67e-07!15;UBERON:0000179!1.67e-07!15;UBERON:0000463!1.67e-07!15;UBERON:0002346!4.12e-07!90;UBERON:0002616!5.11e-07!59;UBERON:0001049!6.61e-07!57;UBERON:0005068!6.61e-07!57;UBERON:0006241!6.61e-07!57;UBERON:0007135!6.61e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!2.37e-17!115;UBERON:0005743!2.18e-09!86;UBERON:0001017!3.35e-09!82;UBERON:0000073!4.34e-09!94;UBERON:0001016!4.34e-09!94;UBERON:0000955!1.40e-08!69;UBERON:0006238!1.40e-08!69;UBERON:0003075!1.41e-07!86;UBERON:0007284!1.41e-07!86;UBERON:0000178!1.67e-07!15;UBERON:0000179!1.67e-07!15;UBERON:0000463!1.67e-07!15;UBERON:0002346!4.12e-07!90;UBERON:0002616!5.11e-07!59;UBERON:0001049!6.61e-07!57;UBERON:0005068!6.61e-07!57;UBERON:0006241!6.61e-07!57;UBERON:0007135!6.61e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.42e-08;15!UBERON:0000179;6.42e-08;15!UBERON:0000463;6.42e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.42e-08;15!UBERON:0000179;6.42e-08;15!UBERON:0000463;6.42e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.00e-17,114;UBERON:0001017,2.78e-09,81;UBERON:0001016,3.43e-09,89;UBERON:0000955,1.37e-08,68;UBERON:0006238,1.37e-08,68;UBERON:0000178,6.74e-08,15;UBERON:0000179,6.74e-08,15;UBERON:0000463,6.74e-08,15;UBERON:0001049,4.30e-07,56;UBERON:0005068,4.30e-07,56;UBERON:0006241,4.30e-07,56;UBERON:0007135,4.30e-07,56;UBERON:0003075,6.35e-07,82;UBERON:0007284,6.35e-07,82 | |||
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| ||
|short_description=p2@ATF7IP | |short_description=p2@ATF7IP | ||
}} | }} |
Latest revision as of 13:13, 17 September 2015
Short description: | p2@ATF7IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATF7IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000541654, uc001rby.3, uc010sht.1_5end |
EntrezGene: | ATF7IP |
HGNC: | 20092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.32e-14 | 53 |
common lymphoid progenitor | 1.32e-14 | 53 |
lymphoid lineage restricted progenitor cell | 2.71e-14 | 52 |
T cell | 1.44e-11 | 25 |
pro-T cell | 1.44e-11 | 25 |
mature alpha-beta T cell | 2.72e-11 | 18 |
alpha-beta T cell | 2.72e-11 | 18 |
immature T cell | 2.72e-11 | 18 |
mature T cell | 2.72e-11 | 18 |
immature alpha-beta T cell | 2.72e-11 | 18 |
CD8-positive, alpha-beta T cell | 2.96e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.00e-17 | 114 |
central nervous system | 2.78e-09 | 81 |
nervous system | 3.43e-09 | 89 |
brain | 1.37e-08 | 68 |
future brain | 1.37e-08 | 68 |
blood | 6.74e-08 | 15 |
haemolymphatic fluid | 6.74e-08 | 15 |
organism substance | 6.74e-08 | 15 |
neural tube | 4.30e-07 | 56 |
neural rod | 4.30e-07 | 56 |
future spinal cord | 4.30e-07 | 56 |
neural keel | 4.30e-07 | 56 |
neural plate | 6.35e-07 | 82 |
presumptive neural plate | 6.35e-07 | 82 |