FFCP PHASE1:Hg19::chr9:4984848..4984885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3717 | |EntrezGene=3717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6192 | |HGNC=6192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-147bp_to_ENST00000476574_5end | |association_with_transcript=-147bp_to_ENST00000476574_5end | ||
|cluster_id=chr9:4984848..4984885,+ | |||
|description=CAGE_peak_4_at_JAK2_5end | |description=CAGE_peak_4_at_JAK2_5end | ||
|id=chr9:4984848..4984885,+ | |id=chr9:4984848..4984885,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.44e-23!42;CL:0000860!3.11e-21!45;CL:0000839!1.01e-15!70;CL:0000557!2.32e-15!71;CL:0002009!5.45e-15!65;CL:0002194!1.18e-14!63;CL:0000576!1.18e-14!63;CL:0000040!1.18e-14!63;CL:0000559!1.18e-14!63;CL:0000766!2.99e-14!76;CL:0000763!5.92e-12!112;CL:0000049!5.92e-12!112;CL:0002320!1.11e-08!365;CL:0002031!7.65e-08!124;CL:0000738!1.28e-07!140;CL:0000134!2.06e-07!358;CL:0002087!5.50e-07!119;CL:0000988!7.57e-07!182;CL:0000037!7.90e-07!172;CL:0000566!7.90e-07!172 | |ontology_enrichment_celltype=CL:0002057!1.44e-23!42;CL:0000860!3.11e-21!45;CL:0000839!1.01e-15!70;CL:0000557!2.32e-15!71;CL:0002009!5.45e-15!65;CL:0002194!1.18e-14!63;CL:0000576!1.18e-14!63;CL:0000040!1.18e-14!63;CL:0000559!1.18e-14!63;CL:0000766!2.99e-14!76;CL:0000763!5.92e-12!112;CL:0000049!5.92e-12!112;CL:0002320!1.11e-08!365;CL:0002031!7.65e-08!124;CL:0000738!1.28e-07!140;CL:0000134!2.06e-07!358;CL:0002087!5.50e-07!119;CL:0000988!7.57e-07!182;CL:0000037!7.90e-07!172;CL:0000566!7.90e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.65e-29;33!CL:0002057;4.65e-29;33!CL:0000473;1.96e-21;39!CL:0000234;1.96e-21;39!CL:0000576;5.51e-21;48!CL:0000766;7.48e-14;69!CL:0000763;3.79e-08;100!CL:0002393;2.00e-07;6!CL:0002397;2.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-40,42;CL:0002057,1.44e-40,42;CL:0000473,5.09e-36,48;CL:0000234,5.09e-36,48;CL:0000839,2.70e-26,66;CL:0002009,3.34e-26,61;CL:0002194,5.74e-26,59;CL:0000576,5.74e-26,59;CL:0000040,5.74e-26,59;CL:0000559,5.74e-26,59;CL:0000557,3.55e-25,67;CL:0000766,2.50e-24,72;CL:0000763,7.40e-20,108;CL:0000049,7.40e-20,108;CL:0002031,2.71e-14,120;CL:0000738,3.16e-14,136;CL:0002087,3.44e-14,115;CL:0000988,2.41e-13,177;CL:0000037,4.93e-13,168;CL:0002032,1.50e-12,161;CL:0000837,1.50e-12,161;CL:0002320,3.00e-09,361;CL:0002393,2.06e-08,9;CL:0002397,2.06e-08,9;CL:0000134,1.04e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.37e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.76e-18!102;UBERON:0003061!3.76e-18!102;UBERON:0002193!8.96e-16!112;UBERON:0002371!3.06e-15!80;UBERON:0001474!6.85e-14!86;UBERON:0004765!7.81e-14!101;UBERON:0001434!7.81e-14!101;UBERON:0003081!1.72e-10!216;UBERON:0002405!7.45e-09!115;UBERON:0002384!1.69e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!3.76e-18!102;UBERON:0003061!3.76e-18!102;UBERON:0002193!8.96e-16!112;UBERON:0002371!3.06e-15!80;UBERON:0001474!6.85e-14!86;UBERON:0004765!7.81e-14!101;UBERON:0001434!7.81e-14!101;UBERON:0003081!1.72e-10!216;UBERON:0002405!7.45e-09!115;UBERON:0002384!1.69e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.70e-25,98;UBERON:0003061,4.70e-25,98;UBERON:0002193,4.18e-23,108;UBERON:0004765,4.69e-23,90;UBERON:0002371,5.56e-23,76;UBERON:0001474,1.55e-21,82;UBERON:0001434,4.33e-20,100;UBERON:0002405,6.51e-19,93;UBERON:0003081,1.42e-15,203;UBERON:0000926,2.66e-10,315;UBERON:0004120,2.66e-10,315;UBERON:0006603,2.66e-10,315;UBERON:0002204,4.93e-10,167;UBERON:0002384,8.33e-09,371 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,2.53299878168311,0.631719873426831,0,0.491467873003018,0,1.31064823278103,1.05506791291381,0.866364470720326,1.98838425436749,0.672325146451775,0,0.730310090387373,0,0.492484232307152,0.204000691244253,1.25381888591235,0.85870796139317,0.958120975510189,0.125542639594803,0.458480434487708,0.410502947249729,0.629686250509434,3.93364276848904,0.383829398097213,0.928896739896456,0.919421224478927,0.30120591877825,0.369754010166788,0,0.142169232487422,0.880801318004542,3.32397245119126,2.80762226458198,1.73608696572681,0,0.32389366601898,0.515151135268373,2.4717700592526,1.51150377475524,4.85168122375632,1.39457422143411,0.822335776043652,1.54853185447552,10.6446185159196,8.96562472851852,8.98632473576624,1.72372840368309,1.29096936716765,1.35426486594342,1.69418105588344,1.91034305040492,0.674170453335254,1.53041946185451,0.962787081228281,1.91801137739712,17.482118909896,14.1619196911359,21.3112375266347,2.03146467040009,1.70215567407342,2.4912889959823,9.04495194924276,6.25779502104242,8.03598725408932,6.65939452896706,2.57794345191295,3.79754864929061,1.90129757680748,1.27562579979026,1.25795187305026,2.92054440980887,2.85336096398862,3.2145117339416,0.855038231223746,1.19350006319454,2.19196984517561,0,0.546138611262131,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.616804496998528,0.501559486172034,0,0,0,0.334231370655521,0,0.443067789167242,0.812411591295047,0.896639238079726,0.650296737799391,0.657751618414705,0.829050053357545,0.869409257205157,0,0,1.04535523804977,1.24640276967323,0.383220493601921,0,0,0.318565414324097,1.30216690771284,0,0.301150238155546,0.639933055772092,1.24930726552346,0.236777252044017,1.64225599384209,0,0.802320587350522,1.15859523106239,2.43806866313962,0,0.12786256184353,1.80719576192283,4.51204119572301,1.15877215168659,0.795285947051099,0.973269740605272,1.32348744029695,0.665188192387692,1.14185221401064,0.785874452986276,0,0,0.324547393654683,0.870648686496336,0.664789802594326,0.476981248610684,0,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.835979866147242,0,0,1.00416183829401,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0.44905874525234,0.112611480483322,3.06633274931766,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,1.01304409331664,0.529636723252875,0.573673241497627,0.709336764396714,1.12135520028461,0,0,1.55605517699883,0.67355336034844,0.817309515567294,0.756787138224657,0.576175924479999,0,0.312160076830321,0,0,0.822041490506354,0.647491777472526,1.82586048712923,0.204154171254893,0.61417158655884,0.309977343527296,1.18800285728205,0.741800787835671,0,0.718618141816238,0.336672227908132,1.12606667884768,0.831192346452549,0.438977620880838,0,0.45071417671979,0.680593098960126,1.97328599257748,0,0.847727604638247,1.50045548042201,0.309157587715317,0.257640540045629,0.37223371266318,0.675105328965065,0.389748020644795,1.51460264546469,0.184099797284599,0.323292113637624,1.06502877754984,0,0.508681776931463,0.57978255948989,0,0.573609190778008,0.121973706129595,0.397589304964456,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0,0.236613600079688,0.337169380156203,0.482022059766964,0.220587945464788,0.435758888184812,0,0.269662616320329,0.784885860501384,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0.514703430895577,0.439001141634502,0,0.402115889646523,0.462942225792648,0,0,0,1.27523445472584,0.469634776943287,0.144366447761074,0,0,1.58040879591855,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.671928512795438,0.567100388969546,0.626909658919938,0,0,0.985326475791887,0.264145302039678,0.414656231081544,1.15295962733569,0.37872730027914,0.190493682876507,0,0,0,0.308482478109971,0,0,0.560655421726804,0,0.51336800074665,0.775630294546667,0,2.535908257668,0.531876233169741,0,0.771622122786426,0,1.5985330740966,0.428933980974443,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,3.64871341923571,0.502257091432126,0,1.91699884393266,1.14861935834114,0,0.579125226670317,0.410952645100767,0,0.112085143993527,1.37921532141349,1.50939302401662,0.898401253958239,1.27047312111232,0,0,0.167516265334349,0.637938751653163,2.24702107184155,0,2.07207756718018,1.2269149171914,5.00170521059677,1.62759014219841,0,0.356857977594324,0.630809660135739,0.234282829985426,0.601892199455438,0,2.0694614258501,2.65690239414175,0.737476674166813,0.60818530127658,1.17480694477644,0.343143423810856,1.03384013061444,1.07857100409308,1.17400313583789,0.909382714338778,0,1.5119514666484,0.744323423456331,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0.925258162815933,0,0.410635780069046,0,0.232420756919918,0.120859449591622,0.200506470303285,0.552485933615378,0,0.5462735040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| ||
|short_description=p4@JAK2 | |short_description=p4@JAK2 | ||
}} | }} |
Latest revision as of 13:12, 17 September 2015
Short description: | p4@JAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JAK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -147bp_to_ENST00000476574_5end |
EntrezGene: | JAK2 |
HGNC: | 6192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.44e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-40 | 42 |
defensive cell | 5.09e-36 | 48 |
phagocyte | 5.09e-36 | 48 |
myeloid lineage restricted progenitor cell | 2.70e-26 | 66 |
macrophage dendritic cell progenitor | 3.34e-26 | 61 |
monopoietic cell | 5.74e-26 | 59 |
monocyte | 5.74e-26 | 59 |
monoblast | 5.74e-26 | 59 |
promonocyte | 5.74e-26 | 59 |
granulocyte monocyte progenitor cell | 3.55e-25 | 67 |
myeloid leukocyte | 2.50e-24 | 72 |
myeloid cell | 7.40e-20 | 108 |
common myeloid progenitor | 7.40e-20 | 108 |
hematopoietic lineage restricted progenitor cell | 2.71e-14 | 120 |
leukocyte | 3.16e-14 | 136 |
nongranular leukocyte | 3.44e-14 | 115 |
hematopoietic cell | 2.41e-13 | 177 |
hematopoietic stem cell | 4.93e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.50e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-12 | 161 |
connective tissue cell | 3.00e-09 | 361 |
intermediate monocyte | 2.06e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.06e-08 | 9 |
mesenchymal cell | 1.04e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.70e-25 | 98 |
blood island | 4.70e-25 | 98 |
hemolymphoid system | 4.18e-23 | 108 |
skeletal element | 4.69e-23 | 90 |
bone marrow | 5.56e-23 | 76 |
bone element | 1.55e-21 | 82 |
skeletal system | 4.33e-20 | 100 |
immune system | 6.51e-19 | 93 |
lateral plate mesoderm | 1.42e-15 | 203 |
mesoderm | 2.66e-10 | 315 |
mesoderm-derived structure | 2.66e-10 | 315 |
presumptive mesoderm | 2.66e-10 | 315 |
musculoskeletal system | 4.93e-10 | 167 |
connective tissue | 8.33e-09 | 371 |