FFCP PHASE1:Hg19::chr10:20105834..20105839,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84898 | |EntrezGene=84898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21013 | |HGNC=21013 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UX71 | |UniProt=Q6UX71 | ||
|association_with_transcript=462bp_to_NM_032812,uc001iqg.1,uc001iqh.1_5end | |association_with_transcript=462bp_to_NM_032812,uc001iqg.1,uc001iqh.1_5end | ||
|cluster_id=chr10:20105834..20105839,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_13_at_PLXDC2_5end | |description=CAGE_peak_13_at_PLXDC2_5end | ||
|id=chr10:20105834..20105839,+ | |id=chr10:20105834..20105839,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.97e-67!76;CL:0002194!1.75e-65!63;CL:0000576!1.75e-65!63;CL:0000040!1.75e-65!63;CL:0000559!1.75e-65!63;CL:0002057!9.10e-64!42;CL:0002009!6.13e-63!65;CL:0000557!7.72e-59!71;CL:0000860!1.60e-58!45;CL:0000839!3.26e-57!70;CL:0000763!9.30e-43!112;CL:0000049!9.30e-43!112;CL:0000738!2.10e-35!140;CL:0002087!9.33e-35!119;CL:0000037!1.71e-28!172;CL:0000566!1.71e-28!172;CL:0002031!1.72e-28!124;CL:0000988!8.21e-27!182;CL:0002032!5.96e-26!165;CL:0000837!5.96e-26!165;CL:0002393!4.06e-15!9;CL:0002397!4.06e-15!9;CL:0000094!2.75e-08!8;CL:0000081!2.05e-07!11;CL:0000775!6.91e-07!3 | |ontology_enrichment_celltype=CL:0000766!5.97e-67!76;CL:0002194!1.75e-65!63;CL:0000576!1.75e-65!63;CL:0000040!1.75e-65!63;CL:0000559!1.75e-65!63;CL:0002057!9.10e-64!42;CL:0002009!6.13e-63!65;CL:0000557!7.72e-59!71;CL:0000860!1.60e-58!45;CL:0000839!3.26e-57!70;CL:0000763!9.30e-43!112;CL:0000049!9.30e-43!112;CL:0000738!2.10e-35!140;CL:0002087!9.33e-35!119;CL:0000037!1.71e-28!172;CL:0000566!1.71e-28!172;CL:0002031!1.72e-28!124;CL:0000988!8.21e-27!182;CL:0002032!5.96e-26!165;CL:0000837!5.96e-26!165;CL:0002393!4.06e-15!9;CL:0002397!4.06e-15!9;CL:0000094!2.75e-08!8;CL:0000081!2.05e-07!11;CL:0000775!6.91e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.17e-66;33!CL:0002057;3.17e-66;33!CL:0000576;4.39e-63;48!CL:0000473;2.92e-59;39!CL:0000234;2.92e-59;39!CL:0000766;4.71e-45;69!CL:0002393;1.14e-20;6!CL:0002397;1.14e-20;6!CL:0000763;3.54e-20;100!CL:0000094;4.91e-17;8!CL:0002087;1.87e-14;104!CL:0000738;4.65e-13;136!CL:0000775;7.19e-13;3!CL:0000081;3.38e-12;11!CL:0000875;1.43e-11;3!CL:0002396;1.43e-11;3!CL:0000988;8.01e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.18e-103,48;CL:0000234,2.18e-103,48;CL:0000860,1.23e-100,42;CL:0002057,1.23e-100,42;CL:0000766,1.01e-98,72;CL:0002194,3.86e-90,59;CL:0000576,3.86e-90,59;CL:0000040,3.86e-90,59;CL:0000559,3.86e-90,59;CL:0002009,6.28e-87,61;CL:0000557,7.07e-83,67;CL:0000839,9.75e-80,66;CL:0000763,5.57e-66,108;CL:0000049,5.57e-66,108;CL:0000738,3.21e-50,136;CL:0002087,1.95e-44,115;CL:0002032,5.04e-41,161;CL:0000837,5.04e-41,161;CL:0000037,7.50e-41,168;CL:0002031,6.23e-40,120;CL:0000988,2.94e-38,177;CL:0002393,9.75e-31,9;CL:0002397,9.75e-31,9;CL:0000094,6.37e-17,8;CL:0000134,6.10e-14,354;CL:0002320,1.82e-13,361;CL:0000775,5.09e-13,3;CL:0000081,4.06e-12,11;CL:0000219,8.46e-12,386;CL:0000875,1.15e-11,3;CL:0002396,1.15e-11,3;CL:0000048,9.22e-10,427;CL:0000723,1.76e-09,433;CL:0000034,4.06e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.44e-71;42!CL:0000049;3.38e-21;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-62!102;UBERON:0003061!1.11e-62!102;UBERON:0002193!7.83e-57!112;UBERON:0002371!2.79e-52!80;UBERON:0001474!2.17e-47!86;UBERON:0004765!1.02e-37!101;UBERON:0001434!1.02e-37!101;UBERON:0002405!6.00e-35!115;UBERON:0003081!9.43e-23!216;UBERON:0002204!2.06e-19!167;UBERON:0007023!6.20e-18!115;UBERON:0000178!1.65e-14!15;UBERON:0000179!1.65e-14!15;UBERON:0000463!1.65e-14!15;UBERON:0001049!7.79e-09!57;UBERON:0005068!7.79e-09!57;UBERON:0006241!7.79e-09!57;UBERON:0007135!7.79e-09!57;UBERON:0001893!8.80e-09!34;UBERON:0002780!1.42e-08!41;UBERON:0001890!1.42e-08!41;UBERON:0006240!1.42e-08!41;UBERON:0001869!2.13e-08!32;UBERON:0002616!2.61e-08!59;UBERON:0003080!2.90e-08!42;UBERON:0002791!4.52e-08!33;UBERON:0002020!1.09e-07!34;UBERON:0003528!1.09e-07!34;UBERON:0000923!1.28e-07!604;UBERON:0005291!1.28e-07!604;UBERON:0006598!1.28e-07!604;UBERON:0002532!1.28e-07!604;UBERON:0000922!1.28e-07!612;UBERON:0002050!1.46e-07!605;UBERON:0005423!1.46e-07!605;UBERON:0001950!3.23e-07!20;UBERON:0000955!8.88e-07!69;UBERON:0006238!8.88e-07!69 | |ontology_enrichment_uberon=UBERON:0002390!1.11e-62!102;UBERON:0003061!1.11e-62!102;UBERON:0002193!7.83e-57!112;UBERON:0002371!2.79e-52!80;UBERON:0001474!2.17e-47!86;UBERON:0004765!1.02e-37!101;UBERON:0001434!1.02e-37!101;UBERON:0002405!6.00e-35!115;UBERON:0003081!9.43e-23!216;UBERON:0002204!2.06e-19!167;UBERON:0007023!6.20e-18!115;UBERON:0000178!1.65e-14!15;UBERON:0000179!1.65e-14!15;UBERON:0000463!1.65e-14!15;UBERON:0001049!7.79e-09!57;UBERON:0005068!7.79e-09!57;UBERON:0006241!7.79e-09!57;UBERON:0007135!7.79e-09!57;UBERON:0001893!8.80e-09!34;UBERON:0002780!1.42e-08!41;UBERON:0001890!1.42e-08!41;UBERON:0006240!1.42e-08!41;UBERON:0001869!2.13e-08!32;UBERON:0002616!2.61e-08!59;UBERON:0003080!2.90e-08!42;UBERON:0002791!4.52e-08!33;UBERON:0002020!1.09e-07!34;UBERON:0003528!1.09e-07!34;UBERON:0000923!1.28e-07!604;UBERON:0005291!1.28e-07!604;UBERON:0006598!1.28e-07!604;UBERON:0002532!1.28e-07!604;UBERON:0000922!1.28e-07!612;UBERON:0002050!1.46e-07!605;UBERON:0005423!1.46e-07!605;UBERON:0001950!3.23e-07!20;UBERON:0000955!8.88e-07!69;UBERON:0006238!8.88e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.29e-14;15!UBERON:0000179;2.29e-14;15!UBERON:0000463;2.29e-14;15!UBERON:0002390;2.57e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.88e-80,98;UBERON:0003061,5.88e-80,98;UBERON:0002371,4.53e-72,76;UBERON:0002193,1.14e-71,108;UBERON:0001474,3.62e-66,82;UBERON:0004765,1.66e-59,90;UBERON:0002405,2.66e-57,93;UBERON:0001434,1.15e-52,100;UBERON:0003081,2.00e-33,203;UBERON:0002204,7.89e-28,167;UBERON:0000926,7.94e-18,315;UBERON:0004120,7.94e-18,315;UBERON:0006603,7.94e-18,315;UBERON:0000178,3.14e-14,15;UBERON:0000179,3.14e-14,15;UBERON:0000463,3.14e-14,15;UBERON:0002384,8.04e-13,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,1.23852898652861,0,0,0,0,0,0.293600439334847,1.66198622559563,1.20326668482085,1.73608696572681,1.56740831967947,0.647787332037959,1.54545340580512,2.32637182047304,4.1566353805769,0.727752183563449,2.32429036905685,1.6446715520873,1.23882548358041,2.01384674625505,2.30544635876191,1.41889337933151,1.72372840368309,2.5819387343353,0,0.941211697713023,1.36453075028923,0.898893937780338,1.22433556948361,2.24650318953266,2.55734850319616,1.31940520074686,1.79517291859469,2.55734850319616,2.03146467040009,2.8369261234557,0.622822248995575,2.26123798731069,3.65038042894141,1.52032191293582,2.42159801053347,0.736555271975129,0.949387162322653,1.47878700418359,1.06302149982522,1.88692780957538,3.03287304095537,3.15371474967163,3.37523732063868,2.28010194992999,1.79025009479181,1.46131323011707,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.870648686496336,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,1.8720341211139,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,5.99205619157746,2.99161459204025,11.603634376209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,1.52927441428475,1.13929437434833,0.952927101831156,1.23408681925858,1.29694662238543,2.70015718619057,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,1.23852898652861,0,0,0,0,0,0.293600439334847,1.66198622559563,1.20326668482085,1.73608696572681,1.56740831967947,0.647787332037959,1.54545340580512,2.32637182047304,4.1566353805769,0.727752183563449,2.32429036905685,1.6446715520873,1.23882548358041,2.01384674625505,2.30544635876191,1.41889337933151,1.72372840368309,2.5819387343353,0,0.941211697713023,1.36453075028923,0.898893937780338,1.22433556948361,2.24650318953266,2.55734850319616,1.31940520074686,1.79517291859469,2.55734850319616,2.03146467040009,2.8369261234557,0.622822248995575,2.26123798731069,3.65038042894141,1.52032191293582,2.42159801053347,0.736555271975129,0.949387162322653,1.47878700418359,1.06302149982522,1.88692780957538,3.03287304095537,3.15371474967163,3.37523732063868,2.28010194992999,1.79025009479181,1.46131323011707,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.870648686496336,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,1.8720341211139,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,5.99205619157746,2.99161459204025,11.603634376209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,1.52927441428475,1.13929437434833,0.952927101831156,1.23408681925858,1.29694662238543,2.70015718619057,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p13@PLXDC2 | |short_description=p13@PLXDC2 | ||
}} | }} |
Latest revision as of 13:09, 17 September 2015
Short description: | p13@PLXDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PLXDC2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 462bp_to_NM_032812, uc001iqg.1, uc001iqh.1_5end |
EntrezGene: | PLXDC2 |
HGNC: | 21013 |
UniProt: | Q6UX71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.88e-80 | 98 |
blood island | 5.88e-80 | 98 |
bone marrow | 4.53e-72 | 76 |
hemolymphoid system | 1.14e-71 | 108 |
bone element | 3.62e-66 | 82 |
skeletal element | 1.66e-59 | 90 |
immune system | 2.66e-57 | 93 |
skeletal system | 1.15e-52 | 100 |
lateral plate mesoderm | 2.00e-33 | 203 |
musculoskeletal system | 7.89e-28 | 167 |
mesoderm | 7.94e-18 | 315 |
mesoderm-derived structure | 7.94e-18 | 315 |
presumptive mesoderm | 7.94e-18 | 315 |
blood | 3.14e-14 | 15 |
haemolymphatic fluid | 3.14e-14 | 15 |
organism substance | 3.14e-14 | 15 |
connective tissue | 8.04e-13 | 371 |