FFCP PHASE1:Hg19::chr7:16793430..16793439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27075 | |EntrezGene=27075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21643 | |HGNC=21643 | ||
|TSSclassifier=strong | |||
|UniProt=O95857,Q6FGK0 | |UniProt=O95857,Q6FGK0 | ||
|association_with_transcript=79bp_to_NM_014399,uc003stq.2_5end | |association_with_transcript=79bp_to_NM_014399,uc003stq.2_5end | ||
|cluster_id=chr7:16793430..16793439,+ | |||
|description=CAGE_peak_3_at_TSPAN13_5end | |description=CAGE_peak_3_at_TSPAN13_5end | ||
|id=chr7:16793430..16793439,+ | |id=chr7:16793430..16793439,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.11e-09!32;CL:0000192!8.74e-07!42;CL:0000514!8.74e-07!42 | |ontology_enrichment_celltype=CL:0000359!1.11e-09!32;CL:0000192!8.74e-07!42;CL:0000514!8.74e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.07e-24;32!CL:0002592;2.58e-14;3!CL:0000192;8.72e-14;43!CL:0002593;2.43e-10;2!CL:0002589;5.29e-10;2!CL:0002595;4.77e-09;5!CL:0002539;2.30e-07;10!CL:0000393;4.54e-07;61!CL:0000211;4.54e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.53e-25,32;CL:0000192,8.80e-18,43;CL:0000514,8.80e-18,43;CL:0002592,1.65e-14,3;CL:0000393,1.79e-13,61;CL:0000211,1.79e-13,61;CL:0000187,3.19e-13,55;CL:0000680,2.23e-12,58;CL:0000056,2.23e-12,58;CL:0000355,2.23e-12,58;CL:0002593,2.22e-10,2;CL:0002589,8.72e-10,2;CL:0002595,4.35e-09,5;CL:0002539,1.91e-07,10;CL:0000222,4.87e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;8.72e-14;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.88e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.14e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004111!6.74e-10!241;UBERON:0001637!1.27e-09!42;UBERON:0003509!1.27e-09!42;UBERON:0004572!1.27e-09!42;UBERON:0004573!6.76e-09!33;UBERON:0004571!6.76e-09!33;UBERON:0000025!1.59e-08!194;UBERON:0001981!1.22e-07!60;UBERON:0007500!1.22e-07!60;UBERON:0004537!1.22e-07!60;UBERON:0006965!1.22e-07!60;UBERON:0000477!1.92e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.43e-17;33!UBERON:0004571;1.43e-17;33!UBERON:0003498;2.58e-14;3!UBERON:0005985;2.58e-14;3!UBERON:0001621;2.58e-14;3!UBERON:0001637;9.41e-14;42!UBERON:0003509;9.41e-14;42!UBERON:0004572;9.41e-14;42!UBERON:0002456;2.43e-10;2!UBERON:0001529;5.29e-10;2!UBERON:0007204;5.29e-10;2!UBERON:0003834;4.77e-09;5!UBERON:0001533;4.77e-09;5!UBERON:0004237;2.30e-07;10!UBERON:0004695;2.30e-07;10!UBERON:0002111;2.30e-07;10!UBERON:0004178;2.30e-07;10!UBERON:0003914;8.03e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.07e-20,33;UBERON:0004571,1.07e-20,33;UBERON:0001637,2.79e-18,42;UBERON:0003509,2.79e-18,42;UBERON:0004572,2.79e-18,42;UBERON:0001621,1.65e-14,3;UBERON:0001134,3.65e-13,62;UBERON:0002036,3.65e-13,62;UBERON:0003082,3.65e-13,62;UBERON:0002385,1.20e-12,64;UBERON:0001015,1.20e-12,64;UBERON:0000383,1.20e-12,64;UBERON:0007500,4.07e-12,59;UBERON:0001981,4.07e-12,59;UBERON:0004537,4.07e-12,59;UBERON:0006965,4.07e-12,59;UBERON:0007503,3.02e-11,78;UBERON:0002329,4.48e-11,71;UBERON:0003059,4.48e-11,71;UBERON:0007282,4.48e-11,71;UBERON:0004290,4.48e-11,71;UBERON:0009618,4.48e-11,71;UBERON:0003077,7.09e-11,72;UBERON:0007285,7.09e-11,72;UBERON:0007524,1.11e-10,73;UBERON:0002456,2.22e-10,2;UBERON:0000055,4.11e-10,68;UBERON:0001529,8.72e-10,2;UBERON:0007204,8.72e-10,2;UBERON:0003834,4.35e-09,5;UBERON:0001533,4.35e-09,5;UBERON:0000486,5.27e-09,83;UBERON:0005256,5.75e-09,122;UBERON:0003498,6.89e-09,5;UBERON:0005985,6.89e-09,5;UBERON:0003914,1.76e-08,117;UBERON:0002049,1.95e-08,78;UBERON:0007798,1.95e-08,78;UBERON:0004872,9.41e-08,83;UBERON:0000490,1.14e-07,148;UBERON:0003104,1.28e-07,160;UBERON:0009142,1.28e-07,160;UBERON:0004237,1.91e-07,10;UBERON:0004695,1.91e-07,10;UBERON:0002111,1.91e-07,10;UBERON:0004178,1.91e-07,10 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,14.7440361900905,0.697801167972428,0.873765488520689,0,0,0,0.672325146451775,0,1.46062018077475,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0.179389635688862,0.213557388818567,0,0.900273288253207,0,0,0.18611685633159,1.35021065793013,0.194874010322397,0,0,0,2.13005755509969,1.10827308050404,0,0,0.272746120590835,0.286804595389004,0,0,0,0.621966330092223,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,3.7983512377401,0,0,0,0,1.20575750823834,6.10073421020206,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.232420756919918,1.20859449591622,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.127612712494584,0.30347334256665,0,1.25924938732256,2.0911118104818,0.924100740528266,2.66153015158511,0,2.22389062924704,1.00187420719394,0,0,0,0,0,0.318203247925937,4.70969184119538,0,0,0.117812402345686,2.42618977887979,1.58510321173008,2.10629228119491,0,2.43713489631284,2.11300293513511,0.136499911407986,0,0,0,0.66343897524122,3.94605796728386,0,0,0.202910376962704,0,0.281695602532241,0,0,1.78335525740625,0,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.798317485731266,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.748562161632879,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,1.03423011972439,5.24888304089858,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.230850775511391,0,0.23056390438806,0,0,0.31900115973192,0.549585560411174,1.06606955203727,0,0,0,0,0,0.167821586975843,0,0,0,0,1.55488378577335,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,1.18375320854817,0,0.61214552326098,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0.400794101257669,0.213452994739353,0,0.432271251462318,0.343609788497747,0.514784993585894,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0.335917362433631,0,1.16495949527454,0,0.0824158583811665,0,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,1.5476039091159,0.242998226632099,0,0,0.0524545881349981,0.211200673038813,0.179287339332845,0,0,0,0,0,4.32110745600634,0.979762080328227,0,0,0,0,2.05173127149315,0,0.129282956361551,0,0,0.704815022316672,1.81538601365081,0.943225830597996,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0.310874401165561,0,6.05327715222069,0.449803112163605,3.41578505127771,0,0,0.521745061811734,0,1.14241563650639,8.95115613050256,0,0.107410557042488,0.464033759878494,3.58286299828754,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.138258436151731,0,0.531459361253452,0.817826971279221,0,0.245772908753719,0,0.79994958341972,0,0,0,0,0.139879507719444,0,0.383683113910955,0.107824811396682,0.629063767423586,0,0.33946505990805,0.212574920101683,0,0,0,0.552032215008773,0.80057074828547,0,0,0.192687675289379,0,0.159633859057151,1.02558182120378,0.252071696221718,0.414943514785307,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0.135075169236789,0,0,0.19024743058172,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0.606965604236632,0,0.266107110487916,0,0,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| ||
|short_description=p3@TSPAN13 | |short_description=p3@TSPAN13 | ||
}} | }} |
Latest revision as of 13:09, 17 September 2015
Short description: | p3@TSPAN13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSPAN13_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_NM_014399, uc003stq.2_5end |
EntrezGene: | TSPAN13 |
HGNC: | 21643 |
UniProt: | O95857Q6FGK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.53e-25 | 32 |
smooth muscle cell | 8.80e-18 | 43 |
smooth muscle myoblast | 8.80e-18 | 43 |
smooth muscle cell of the coronary artery | 1.65e-14 | 3 |
electrically responsive cell | 1.79e-13 | 61 |
electrically active cell | 1.79e-13 | 61 |
muscle cell | 3.19e-13 | 55 |
muscle precursor cell | 2.23e-12 | 58 |
myoblast | 2.23e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-12 | 58 |
smooth muscle cell of the internal thoracic artery | 2.22e-10 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 8.72e-10 | 2 |
smooth muscle cell of the subclavian artery | 4.35e-09 | 5 |
aortic smooth muscle cell | 1.91e-07 | 10 |
mesodermal cell | 4.87e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.14e-08 | 14 |