FFCP PHASE1:Hg19::chr6:28583946..28583963,-: Difference between revisions
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|id=chr6:28583946..28583963,-
|short_description=p6@SCAND3
|description=CAGE_peak_6_at_SCAND3_5end
|association_with_transcript=25bp_to_ENST00000530247_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114821 | |EntrezGene=114821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13851 | |HGNC=13851 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000530247_5end | |||
|cluster_id=chr6:28583946..28583963,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_SCAND3_5end | |||
|id=chr6:28583946..28583963,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease=DOID:1036!3.55e-44!8;DOID:8692!8.72e-12!31;DOID:1240!1.90e-09!39;DOID:2531!2.66e-07!51;DOID:0060083!2.66e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.19e-32;8!DOID:8692;3.27e-09;31!DOID:1240;2.09e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.19e-32,8;DOID:8692,6.17e-09,31;DOID:1240,3.11e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.54e-12!8;UBERON:0003135!4.08e-09!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11 | |||
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|short_description=p6@SCAND3 | |||
}} | }} |
Latest revision as of 12:58, 17 September 2015
Short description: | p6@SCAND3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCAND3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 25bp_to_ENST00000530247_5end |
EntrezGene: | SCAND3 |
HGNC: | 13851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.19e-32 | 8 |
myeloid leukemia | 6.17e-09 | 31 |
leukemia | 3.11e-07 | 39 |