FFCP PHASE1:Hg19::chr19:36120009..36120026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79171 | |EntrezGene=79171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28117 | |HGNC=28117 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BTD8 | |UniProt=Q9BTD8 | ||
|association_with_transcript=29bp_to_ENST00000262633,ENST00000360475,NM_024321,uc002oan.2,uc002oao.2,uc002oap.2,uc002oaq.2,uc010eef.2,uc010eeg.2,uc010xsx.1_5end | |association_with_transcript=29bp_to_ENST00000262633,ENST00000360475,NM_024321,uc002oan.2,uc002oao.2,uc002oap.2,uc002oaq.2,uc010eef.2,uc010eeg.2,uc010xsx.1_5end | ||
|cluster_id=chr19:36120009..36120026,+ | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_4_at_RBM42_5end | |description=CAGE_peak_4_at_RBM42_5end | ||
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|ontology_enrichment_celltype=CL:0000012!5.63e-17!682;CL:0000548!6.33e-16!679;CL:0000004!6.33e-16!679;CL:0000255!6.33e-16!679;CL:0000066!2.38e-11!254;CL:0000144!1.21e-10!625;CL:0002321!1.42e-10!248;CL:0000003!2.16e-10!722;CL:0000220!2.72e-10!246;CL:0000063!4.52e-07!578 | |ontology_enrichment_celltype=CL:0000012!5.63e-17!682;CL:0000548!6.33e-16!679;CL:0000004!6.33e-16!679;CL:0000255!6.33e-16!679;CL:0000066!2.38e-11!254;CL:0000144!1.21e-10!625;CL:0002321!1.42e-10!248;CL:0000003!2.16e-10!722;CL:0000220!2.72e-10!246;CL:0000063!4.52e-07!578 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.44e-07,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.261185628199839,2.45733936501509,4.88460817580699,0.436882744260345,0.791300934685361,0.123766352960047,0.662794751455832,0,1.80808358407193,1.46062018077475,0.975865597581014,0.61560529038394,0.816002764977012,0,0.572471974262113,0.684372125364421,0.376627918784408,0,0.328402357799783,0.157421562627358,1.57345710739562,0.767658796194425,0.464448369948228,2.75826367343678,2.409647350226,0.369754010166788,1.62681121218633,0.284338464974843,1.17440175733939,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.581592955118259,1.13362783106643,0.727752183563449,0.464858073811369,1.6446715520873,2.16794459626573,1.43846196161075,0.512321413058201,2.12834006899727,0,0,1.35426486594342,0.564727018627814,1.63743690034707,1.12361742222542,0.306083892370903,1.28371610830437,1.27867425159808,0.989553900560148,0.598390972864896,1.27867425159808,1.16083695451434,3.40431134814684,1.24564449799115,1.25624332628372,0,1.08594422352558,0,1.84138817993782,1.58231193720442,0.422510572623884,0.425208599930087,0.838634582033504,0.561643155732475,0.750884464207532,0.32145117339416,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0,1.32171328579026,1.12101712596307,1.05353633910031,0.786839080455332,1.17903228824749,1.23360899399706,0.334372990781356,0,1.4203434172042,1.94826728407911,0,0.883817722424512,0.664601683750863,0.270803863765016,0.25618263945135,0.390178042679635,0.328875809207352,0,0,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0.68725489096526,0.759059076058509,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.604820229674197,2.40696176205157,1.15859523106239,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.579386075843295,0,0,0,0.665188192387692,0.702678285545008,0.392937226493138,0.364295288292542,0,0,0.348259474598534,0.26591592103773,0.953962497221368,0,0.371457501329565,0.39752481473341,2.58070378531837,1.38856200643038,1.13061588384802,0.838998872419812,0,1.25396979922086,0.258416759169329,0.35576626268671,0.66944122552934,1.20848795132744,0.760272105718513,0.976248230192678,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0.900891843866578,0,1.89853131913626,0.916008719652036,1.31780417436063,3.87780264148325,0,0.496971951695318,0.379891534993739,0.926864265692532,0,0.354668382198357,1.68203280042692,0,1.72667283892012,0.933633106199299,0.269421344139376,0.817309515567294,0,0,1.40592859100278,0.624320153660641,1.1409436430889,0.298897361103602,0.352303495931295,0.161872944368132,0,0,0.368502951935304,0.103325781175765,1.18800285728205,0.247266929278557,0,2.87447256726495,0.168336113954066,0.250237039743928,0,0.877955241761676,0.612975591598039,0.600952235626387,1.24775401476023,0.538168907066586,0.213557388818567,1.27159140695737,0.900273288253207,0.412210116953756,0,0.558350568994769,0.843881661206331,0.487185025805993,0,0.184099797284599,0.161646056818812,0,0.604512589365842,0.847802961552438,0.57978255948989,0.818238361772504,1.43402297694502,0.731842236777572,1.19276791489337,0.929551542956147,2.798848485415,2.27088765788066,2.18986415445498,3.12899064659632,1.28648187638577,2.76269842704961,0.464367928031979,0.721879481669586,0.709840800239063,0.337169380156203,0.964044119533928,0.441175890929576,0.871517776369625,0.949082476444386,1.34831308160164,0.784885860501384,1.15424147083917,0.738155454624648,1.40241773803446,0,0,2.53510069643662,2.94848165003288,0,3.97316789473185,0.491953754172454,0.514703430895577,1.31700342490351,1.1240175325762,0.402115889646523,0.185176890317059,0.325808305310325,0,1.44331342025273,0.34779121492523,0.352226082707465,0.577465791044295,0.462985512576611,0,2.37061319387782,2.57545848628462,0.246217006087397,0.234004265139238,0.148631162288728,4.68669169933885,3.19166043577833,1.84307626415102,0.447792613514241,1.45316969256981,0.383382679165211,0,0.616339038092582,1.03664057770386,0.144119953416961,0.50496973370552,0.190493682876507,0.381988425558278,3.51652341630141,0,0.205654985406647,0.600686115687835,0.571652865261156,0.112131084345361,1.30788020649984,0.2933531432838,1.03417372606222,0,0.845302752556,0.26593811658487,2.08014873822732,0.771622122786426,1.41849132023278,2.39779961114489,0,0.542621605391443,0.823240336780769,0.65147236858747,0.710783897485092,3.95975936466715,1.80863626235752,3.48613383440118,0.699810938274399,0,0,0,1.4377491329495,0,1.42636905040718,1.59259437334337,0.205476322550383,1.43248770591916,0.224170287987055,0.788123040807709,1.2937654491571,1.02674429023799,1.01637849688985,2.60279707715243,2.31986643833309,1.67516265334349,1.91381625495949,0,0,0.414415513436035,0.36807447515742,0,0.271265023699736,0,0.713715955188647,0.315404830067869,0.234282829985426,0,0,1.03473071292505,0.664225598535437,0,0.260650843404249,0,1.37257369524342,0,0.431428401637234,0.426910231213777,7.27506171471023,3.3287087902099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| ||
|short_description=p4@RBM42 | |short_description=p4@RBM42 | ||
}} | }} |
Latest revision as of 12:45, 17 September 2015
Short description: | p4@RBM42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBM42_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 29bp_to_ENST00000262633, ENST00000360475, NM_024321, uc002oan.2, uc002oao.2, uc002oap.2, uc002oaq.2, uc010eef.2, uc010eeg.2, uc010xsx.1_5end |
EntrezGene: | RBM42 |
HGNC: | 28117 |
UniProt: | Q9BTD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.44e-07 | 250 |