FFCP PHASE1:Hg19::chr20:61992689..61992710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1137 | |EntrezGene=1137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1958 | |HGNC=1958 | ||
|TSSclassifier=strong | |||
|UniProt=P43681 | |UniProt=P43681 | ||
|association_with_transcript=0bp_to_NM_000744,uc002yes.2,uc010gkf.1,uc011aaw.1_5end | |association_with_transcript=0bp_to_NM_000744,uc002yes.2,uc010gkf.1,uc011aaw.1_5end | ||
|cluster_id=chr20:61992689..61992710,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_2_at_CHRNA4_5end | |description=CAGE_peak_2_at_CHRNA4_5end | ||
|id=chr20:61992689..61992710,- | |id=chr20:61992689..61992710,- | ||
|ontology_enrichment_celltype=CL:0000047!3.80e-14!8;CL:0000540!4.78e-11!6;CL:0000031!4.78e-11!6;CL:0000404!4.78e-11!6;CL:0002319!2.28e-08!25 | |ontology_enrichment_celltype=CL:0000047!3.80e-14!8;CL:0000540!4.78e-11!6;CL:0000031!4.78e-11!6;CL:0000404!4.78e-11!6;CL:0002319!2.28e-08!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.87e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.25e-18;82!UBERON:0006241;5.94e-10;3!UBERON:0003057;5.94e-10;3!UBERON:0006215;1.46e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.89e-78!82;UBERON:0005743!8.70e-77!86;UBERON:0000073!4.69e-73!94;UBERON:0001016!4.69e-73!94;UBERON:0001049!4.04e-62!57;UBERON:0005068!4.04e-62!57;UBERON:0006241!4.04e-62!57;UBERON:0007135!4.04e-62!57;UBERON:0000955!1.61e-57!69;UBERON:0006238!1.61e-57!69;UBERON:0003075!4.96e-54!86;UBERON:0007284!4.96e-54!86;UBERON:0007023!1.91e-51!115;UBERON:0002616!4.62e-51!59;UBERON:0002346!6.81e-51!90;UBERON:0002780!2.58e-47!41;UBERON:0001890!2.58e-47!41;UBERON:0006240!2.58e-47!41;UBERON:0003080!6.02e-46!42;UBERON:0001893!4.26e-45!34;UBERON:0002020!6.42e-45!34;UBERON:0003528!6.42e-45!34;UBERON:0002791!3.36e-43!33;UBERON:0004121!3.96e-43!169;UBERON:0000924!1.16e-41!173;UBERON:0006601!1.16e-41!173;UBERON:0001869!1.20e-41!32;UBERON:0002619!1.55e-38!22;UBERON:0003056!3.96e-36!61;UBERON:0000153!6.12e-36!129;UBERON:0007811!6.12e-36!129;UBERON:0000033!1.47e-35!123;UBERON:0001950!2.53e-35!20;UBERON:0000956!3.08e-33!25;UBERON:0000203!3.08e-33!25;UBERON:0003076!1.32e-16!15;UBERON:0003057!1.32e-16!15;UBERON:0004732!1.23e-13!13;UBERON:0000025!2.15e-13!194;UBERON:0002308!6.15e-13!9;UBERON:0000125!6.15e-13!9;UBERON:0002420!7.98e-13!9;UBERON:0007245!7.98e-13!9;UBERON:0010009!7.98e-13!9;UBERON:0010011!7.98e-13!9;UBERON:0000454!7.98e-13!9;UBERON:0000200!2.95e-12!6;UBERON:0001871!3.64e-12!7;UBERON:0000475!6.17e-12!365;UBERON:0004733!6.74e-12!12;UBERON:0002028!6.74e-12!12;UBERON:0007277!6.74e-12!12;UBERON:0002298!1.36e-11!8;UBERON:0000064!3.94e-11!219;UBERON:0001872!1.05e-10!5;UBERON:0000922!1.56e-10!612;UBERON:0002021!1.58e-10!5;UBERON:0000477!4.10e-10!286;UBERON:0000349!5.27e-10!5;UBERON:0004111!7.47e-10!241;UBERON:0009663!1.69e-09!7;UBERON:0000062!1.78e-09!511;UBERON:0000483!2.68e-09!309;UBERON:0000119!4.67e-09!312;UBERON:0000481!1.56e-08!347;UBERON:0000468!1.91e-08!659;UBERON:0000923!2.95e-08!604;UBERON:0005291!2.95e-08!604;UBERON:0006598!2.95e-08!604;UBERON:0002532!2.95e-08!604;UBERON:0002050!3.34e-08!605;UBERON:0005423!3.34e-08!605;UBERON:0000467!3.61e-08!625;UBERON:0000480!4.08e-08!626;UBERON:0002680!1.40e-07!9;UBERON:0001895!1.40e-07!9;UBERON:0010092!1.40e-07!9;UBERON:0000988!3.67e-07!3;UBERON:0006331!9.24e-07!3;UBERON:0002771!9.98e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!1.89e-78!82;UBERON:0005743!8.70e-77!86;UBERON:0000073!4.69e-73!94;UBERON:0001016!4.69e-73!94;UBERON:0001049!4.04e-62!57;UBERON:0005068!4.04e-62!57;UBERON:0006241!4.04e-62!57;UBERON:0007135!4.04e-62!57;UBERON:0000955!1.61e-57!69;UBERON:0006238!1.61e-57!69;UBERON:0003075!4.96e-54!86;UBERON:0007284!4.96e-54!86;UBERON:0007023!1.91e-51!115;UBERON:0002616!4.62e-51!59;UBERON:0002346!6.81e-51!90;UBERON:0002780!2.58e-47!41;UBERON:0001890!2.58e-47!41;UBERON:0006240!2.58e-47!41;UBERON:0003080!6.02e-46!42;UBERON:0001893!4.26e-45!34;UBERON:0002020!6.42e-45!34;UBERON:0003528!6.42e-45!34;UBERON:0002791!3.36e-43!33;UBERON:0004121!3.96e-43!169;UBERON:0000924!1.16e-41!173;UBERON:0006601!1.16e-41!173;UBERON:0001869!1.20e-41!32;UBERON:0002619!1.55e-38!22;UBERON:0003056!3.96e-36!61;UBERON:0000153!6.12e-36!129;UBERON:0007811!6.12e-36!129;UBERON:0000033!1.47e-35!123;UBERON:0001950!2.53e-35!20;UBERON:0000956!3.08e-33!25;UBERON:0000203!3.08e-33!25;UBERON:0003076!1.32e-16!15;UBERON:0003057!1.32e-16!15;UBERON:0004732!1.23e-13!13;UBERON:0000025!2.15e-13!194;UBERON:0002308!6.15e-13!9;UBERON:0000125!6.15e-13!9;UBERON:0002420!7.98e-13!9;UBERON:0007245!7.98e-13!9;UBERON:0010009!7.98e-13!9;UBERON:0010011!7.98e-13!9;UBERON:0000454!7.98e-13!9;UBERON:0000200!2.95e-12!6;UBERON:0001871!3.64e-12!7;UBERON:0000475!6.17e-12!365;UBERON:0004733!6.74e-12!12;UBERON:0002028!6.74e-12!12;UBERON:0007277!6.74e-12!12;UBERON:0002298!1.36e-11!8;UBERON:0000064!3.94e-11!219;UBERON:0001872!1.05e-10!5;UBERON:0000922!1.56e-10!612;UBERON:0002021!1.58e-10!5;UBERON:0000477!4.10e-10!286;UBERON:0000349!5.27e-10!5;UBERON:0004111!7.47e-10!241;UBERON:0009663!1.69e-09!7;UBERON:0000062!1.78e-09!511;UBERON:0000483!2.68e-09!309;UBERON:0000119!4.67e-09!312;UBERON:0000481!1.56e-08!347;UBERON:0000468!1.91e-08!659;UBERON:0000923!2.95e-08!604;UBERON:0005291!2.95e-08!604;UBERON:0006598!2.95e-08!604;UBERON:0002532!2.95e-08!604;UBERON:0002050!3.34e-08!605;UBERON:0005423!3.34e-08!605;UBERON:0000467!3.61e-08!625;UBERON:0000480!4.08e-08!626;UBERON:0002680!1.40e-07!9;UBERON:0001895!1.40e-07!9;UBERON:0010092!1.40e-07!9;UBERON:0000988!3.67e-07!3;UBERON:0006331!9.24e-07!3;UBERON:0002771!9.98e-07!3 | ||
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|short_description=p2@CHRNA4 | |short_description=p2@CHRNA4 | ||
}} | }} |
Latest revision as of 12:38, 17 September 2015
Short description: | p2@CHRNA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHRNA4_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_000744, uc002yes.2, uc010gkf.1, uc011aaw.1_5end |
EntrezGene: | CHRNA4 |
HGNC: | 1958 |
UniProt: | P43681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.87e-07 | 8 |