FFCP PHASE1:Hg19::chr5:191685..191693,+: Difference between revisions
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|id=chr5:191685..191693,+
|short_description=p8@LRRC14B
|description=CAGE_peak_8_at_LRRC14B_5end
|association_with_transcript=33bp_to_BC156515,BC172511_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389257 | |EntrezGene=389257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37268 | |HGNC=37268 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_BC156515,BC172511_5end | |||
|cluster_id=chr5:191685..191693,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_8_at_LRRC14B_5end | |||
|id=chr5:191685..191693,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.84e-34;1!UBERON:0010227;3.05e-34;1!UBERON:0008814;1.07e-17;2!UBERON:0010056;1.07e-17;2 | |||
|ontology_enrichment_disease=DOID:114!7.84e-19!2;DOID:178!3.01e-10!1;DOID:326!3.01e-10!1;DOID:3978!3.01e-10!1;DOID:3394!3.01e-10!1;DOID:5844!3.01e-10!1;DOID:1287!6.84e-10!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.38e-20!27;UBERON:0000341!1.03e-19!2;UBERON:0003103!2.70e-14!69;UBERON:0004151!2.05e-13!3;UBERON:0001723!2.18e-13!3;UBERON:0001033!2.18e-13!3;UBERON:0010056!2.18e-13!3;UBERON:0003978!4.56e-13!3;UBERON:0009751!4.56e-13!3;UBERON:0000946!4.56e-13!3;UBERON:0002523!4.56e-13!3;UBERON:0005983!4.56e-13!3;UBERON:0002165!4.56e-13!3;UBERON:0002062!4.56e-13!3;UBERON:0007280!4.56e-13!3;UBERON:0002079!7.40e-11!1;UBERON:0002084!1.57e-10!1;UBERON:0002082!1.57e-10!1;UBERON:0004706!1.57e-10!1;UBERON:0002135!1.89e-10!1;UBERON:0002146!2.08e-10!1;UBERON:0005623!2.08e-10!1;UBERON:0002372!3.96e-10!1;UBERON:0001961!3.96e-10!1;UBERON:0001744!3.96e-10!1;UBERON:0001735!3.96e-10!1;UBERON:0000948!1.59e-09!24;UBERON:0005498!1.59e-09!24;UBERON:0004140!1.59e-09!24;UBERON:0009881!1.59e-09!24;UBERON:0004141!1.59e-09!24;UBERON:0003084!1.59e-09!24;UBERON:0007005!1.59e-09!24;UBERON:0004139!1.59e-09!24;UBERON:0004291!1.59e-09!24;UBERON:0007023!2.34e-09!115;UBERON:0001042!8.73e-09!10;UBERON:0009145!8.73e-09!10;UBERON:0006562!4.96e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;7.72e-66;2!UBERON:0002079;3.05e-34;1!UBERON:0000974;8.47e-23;6!UBERON:0002081;7.05e-18;2!UBERON:0004151;2.19e-12;3!UBERON:0001723;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0000948;4.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,7.73e-66,2;UBERON:0002079,2.58e-34,1;UBERON:0002081,6.48e-18,2;UBERON:0010227,6.48e-18,2;UBERON:0000974,3.97e-14,10;UBERON:0004151,2.07e-12,3;UBERON:0001723,2.89e-12,3;UBERON:0001033,2.89e-12,3;UBERON:0010056,2.89e-12,3 | |||
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|short_description=p8@LRRC14B | |||
}} | }} |
Latest revision as of 12:33, 17 September 2015
Short description: | p8@LRRC14B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LRRC14B_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 33bp_to_BC156515, BC172511_5end |
EntrezGene: | LRRC14B |
HGNC: | 37268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 7.73e-66 | 2 |
left cardiac atrium | 2.58e-34 | 1 |
cardiac atrium | 6.48e-18 | 2 |
future cardiac atrium | 6.48e-18 | 2 |
neck | 3.97e-14 | 10 |
cardiac chamber | 2.07e-12 | 3 |
tongue | 2.89e-12 | 3 |
gustatory system | 2.89e-12 | 3 |
future tongue | 2.89e-12 | 3 |