FFCP PHASE1:Hg19::chr9:4299874..4299887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=169792 | |EntrezGene=169792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28510 | |HGNC=28510 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEA6,Q1PHJ8 | |UniProt=Q8NEA6,Q1PHJ8 | ||
|association_with_transcript=28bp_to_ENST00000381971,ENST00000465708,ENST00000477901_5end | |association_with_transcript=28bp_to_ENST00000381971,ENST00000465708,ENST00000477901_5end | ||
|cluster_id=chr9:4299874..4299887,- | |||
|description=CAGE_peak_9_at_GLIS3_5end | |description=CAGE_peak_9_at_GLIS3_5end | ||
|id=chr9:4299874..4299887,- | |id=chr9:4299874..4299887,- | ||
|ontology_enrichment_celltype=CL:0000128!9.21e-07!7;CL:0000126!9.21e-07!7;CL:0000127!9.21e-07!7;CL:0002453!9.21e-07!7 | |ontology_enrichment_celltype=CL:0000128!9.21e-07!7;CL:0000126!9.21e-07!7;CL:0000127!9.21e-07!7;CL:0002453!9.21e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;3.31e-18;7!CL:0000126;3.31e-18;7!CL:0000127;3.31e-18;7!CL:0002605;2.18e-16;3!CL:0000064;1.51e-15;3!CL:0000067;1.51e-15;3!CL:0005012;1.51e-15;3!CL:0002304;1.51e-15;3!CL:0000047;6.09e-11;2!CL:0002319;2.44e-08;25!CL:0000243;2.42e-07;15!CL:0000125;2.42e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.24e-18,7;CL:0000126,1.24e-18,7;CL:0000127,1.24e-18,7;CL:0002453,1.24e-18,7;CL:0002605,1.21e-16,3;CL:0000064,2.46e-15,3;CL:0000067,2.46e-15,3;CL:0005012,2.46e-15,3;CL:0002304,2.46e-15,3;CL:0002319,1.47e-08,25;CL:0000243,1.66e-07,15;CL:0000125,1.66e-07,15;CL:0000030,1.66e-07,15;CL:0000339,1.66e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.09e-11;2!CL:0000339;2.42e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.78e-22!86;UBERON:0007284!1.78e-22!86;UBERON:0002346!2.17e-20!90;UBERON:0001049!1.72e-18!57;UBERON:0005068!1.72e-18!57;UBERON:0006241!1.72e-18!57;UBERON:0007135!1.72e-18!57;UBERON:0005743!4.05e-18!86;UBERON:0001017!4.66e-18!82;UBERON:0002616!4.36e-17!59;UBERON:0000955!6.24e-17!69;UBERON:0006238!6.24e-17!69;UBERON:0000119!1.89e-16!312;UBERON:0000477!2.90e-16!286;UBERON:0000483!4.15e-16!309;UBERON:0000073!1.65e-15!94;UBERON:0001016!1.65e-15!94;UBERON:0000475!2.28e-15!365;UBERON:0003056!4.38e-15!61;UBERON:0000025!1.80e-14!194;UBERON:0000062!6.32e-14!511;UBERON:0002780!7.46e-14!41;UBERON:0001890!7.46e-14!41;UBERON:0006240!7.46e-14!41;UBERON:0000481!9.98e-14!347;UBERON:0007023!1.92e-13!115;UBERON:0003080!3.12e-13!42;UBERON:0004111!4.22e-13!241;UBERON:0000033!2.81e-12!123;UBERON:0000153!5.45e-12!129;UBERON:0007811!5.45e-12!129;UBERON:0000468!1.94e-11!659;UBERON:0001893!2.90e-11!34;UBERON:0002791!7.34e-11!33;UBERON:0002020!7.41e-11!34;UBERON:0003528!7.41e-11!34;UBERON:0000467!1.28e-10!625;UBERON:0000480!1.71e-10!626;UBERON:0001869!3.61e-10!32;UBERON:0000956!4.48e-10!25;UBERON:0000203!4.48e-10!25;UBERON:0000064!1.00e-09!219;UBERON:0002050!2.37e-09!605;UBERON:0005423!2.37e-09!605;UBERON:0004121!2.50e-09!169;UBERON:0000922!3.81e-09!612;UBERON:0000923!5.24e-09!604;UBERON:0005291!5.24e-09!604;UBERON:0006598!5.24e-09!604;UBERON:0002532!5.24e-09!604;UBERON:0000924!1.36e-08!173;UBERON:0006601!1.36e-08!173;UBERON:0000489!4.17e-08!32;UBERON:0002619!8.24e-08!22;UBERON:0001950!6.31e-07!20;UBERON:0003103!7.42e-07!69 | |ontology_enrichment_uberon=UBERON:0003075!1.78e-22!86;UBERON:0007284!1.78e-22!86;UBERON:0002346!2.17e-20!90;UBERON:0001049!1.72e-18!57;UBERON:0005068!1.72e-18!57;UBERON:0006241!1.72e-18!57;UBERON:0007135!1.72e-18!57;UBERON:0005743!4.05e-18!86;UBERON:0001017!4.66e-18!82;UBERON:0002616!4.36e-17!59;UBERON:0000955!6.24e-17!69;UBERON:0006238!6.24e-17!69;UBERON:0000119!1.89e-16!312;UBERON:0000477!2.90e-16!286;UBERON:0000483!4.15e-16!309;UBERON:0000073!1.65e-15!94;UBERON:0001016!1.65e-15!94;UBERON:0000475!2.28e-15!365;UBERON:0003056!4.38e-15!61;UBERON:0000025!1.80e-14!194;UBERON:0000062!6.32e-14!511;UBERON:0002780!7.46e-14!41;UBERON:0001890!7.46e-14!41;UBERON:0006240!7.46e-14!41;UBERON:0000481!9.98e-14!347;UBERON:0007023!1.92e-13!115;UBERON:0003080!3.12e-13!42;UBERON:0004111!4.22e-13!241;UBERON:0000033!2.81e-12!123;UBERON:0000153!5.45e-12!129;UBERON:0007811!5.45e-12!129;UBERON:0000468!1.94e-11!659;UBERON:0001893!2.90e-11!34;UBERON:0002791!7.34e-11!33;UBERON:0002020!7.41e-11!34;UBERON:0003528!7.41e-11!34;UBERON:0000467!1.28e-10!625;UBERON:0000480!1.71e-10!626;UBERON:0001869!3.61e-10!32;UBERON:0000956!4.48e-10!25;UBERON:0000203!4.48e-10!25;UBERON:0000064!1.00e-09!219;UBERON:0002050!2.37e-09!605;UBERON:0005423!2.37e-09!605;UBERON:0004121!2.50e-09!169;UBERON:0000922!3.81e-09!612;UBERON:0000923!5.24e-09!604;UBERON:0005291!5.24e-09!604;UBERON:0006598!5.24e-09!604;UBERON:0002532!5.24e-09!604;UBERON:0000924!1.36e-08!173;UBERON:0006601!1.36e-08!173;UBERON:0000489!4.17e-08!32;UBERON:0002619!8.24e-08!22;UBERON:0001950!6.31e-07!20;UBERON:0003103!7.42e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.51e-15;3!UBERON:0001775;1.51e-15;3!UBERON:0000488;8.60e-12;4!UBERON:0002203;5.13e-08;6!UBERON:0001768;5.13e-08;6!UBERON:0002200;5.13e-08;6!UBERON:0006947;1.42e-07;3!UBERON:0004054;1.42e-07;3!UBERON:0007625;2.11e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.46e-15,3;UBERON:0001775,2.46e-15,3;UBERON:0003075,7.31e-12,82;UBERON:0007284,7.31e-12,82;UBERON:0000488,1.23e-11,4;UBERON:0002346,3.68e-11,86;UBERON:0010314,1.83e-09,132;UBERON:0003056,3.12e-09,61;UBERON:0001017,5.59e-09,81;UBERON:0010371,1.13e-08,104;UBERON:0001049,1.39e-08,56;UBERON:0005068,1.39e-08,56;UBERON:0006241,1.39e-08,56;UBERON:0007135,1.39e-08,56;UBERON:0002203,6.50e-08,6;UBERON:0001768,6.50e-08,6;UBERON:0002200,6.50e-08,6;UBERON:0001016,8.00e-08,89;UBERON:0006947,8.34e-08,3;UBERON:0004054,8.34e-08,3;UBERON:0000073,1.57e-07,53;UBERON:0002616,1.57e-07,53;UBERON:0007625,2.60e-07,11 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0.246242116153576,0.612002073732759,1.25381888591235,2.28988789704845,1.64249310087461,2.76193807108566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0.434539556882471,0,0.486634870302636,1.51255707462509,1.10864698731282,1.05401742831751,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,1.22031028774085,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.506522046658319,0,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,0.302714855289863,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.504867548488229,0.184099797284599,0,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.927443239800615,0.352226082707465,0.866198686566443,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576479813667846,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.415941723061614,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.767309866440312,0,0.256278298511402,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0.574072240823034,0.364182336013434,0.131124414959424,0.902399225814824,0.15403067420883,0.784349769176855,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.895499018888713,0,0,0,0,0.650756789328606,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.462145851343933,0.307007349452259,0.275673144969061,0.537101224341368,0.580066775656914,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.571890581771475,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.281338832821026,2.89402633059555,0.329607748453519,0,0.597743964753209,0.276283915531148,0.251932747854276,1.84083628503879,0,0.311039587661807,0.179736702294654,0.716084698702437,0,0.493217028184668,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.331737779793674,0,0.219385397153973,0,0,0.769502585037971,0.683652335082007,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,1.07841812769083,0,0.468528891450678,0,0,0,0.394584402849391,0,0.61214552326098,0.505492637027904,0.60129367765797,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0,0.0870592065804026,1.7472666824203,0,0,0,0,0,1.5003541537555,0,0.959293472527256,0.19871461170299,0.696418755514666,0,0.881747022766871,0.426905989478705,0.19980960958213,0.288180834308212,0,0.686379991447858,0,0.372757606696298,0,0.543616824294456,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,2.36225955635397,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.485996453264197,0,0.472834243795189,2.25554728980492,0.211200673038813,0.537862017998534,0.959575986597226,0,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0,0,2.65013777824443,0.646414781807753,0.13223260174269,0.513260513652988,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.244052529803926,0.3755727921195,1.14681839138014,0.998361463831671,0.993542447062135,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.568209015825267,0.50313580350515,0.889811221596536,0.228840068396924,0,0.15543720058278,0.443565449968902,0.63718706865481,0.899606224327209,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0,0,0.800055529326307,0,0,0,0.19261983040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| ||
|short_description=p9@GLIS3 | |short_description=p9@GLIS3 | ||
}} | }} |
Latest revision as of 12:18, 17 September 2015
Short description: | p9@GLIS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GLIS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000381971, ENST00000465708, ENST00000477901_5end |
EntrezGene: | GLIS3 |
HGNC: | 28510 |
UniProt: | Q8NEA6Q1PHJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.24e-18 | 7 |
macroglial cell | 1.24e-18 | 7 |
astrocyte | 1.24e-18 | 7 |
oligodendrocyte precursor cell | 1.24e-18 | 7 |
astrocyte of the cerebral cortex | 1.21e-16 | 3 |
ciliated cell | 2.46e-15 | 3 |
ciliated epithelial cell | 2.46e-15 | 3 |
multi-ciliated epithelial cell | 2.46e-15 | 3 |
non-pigmented ciliary epithelial cell | 2.46e-15 | 3 |
neural cell | 1.47e-08 | 25 |
glial cell (sensu Vertebrata) | 1.66e-07 | 15 |
glial cell | 1.66e-07 | 15 |
glioblast | 1.66e-07 | 15 |
glioblast (sensu Vertebrata) | 1.66e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.46e-15 | 3 |
ciliary body | 2.46e-15 | 3 |
neural plate | 7.31e-12 | 82 |
presumptive neural plate | 7.31e-12 | 82 |
atypical epithelium | 1.23e-11 | 4 |
neurectoderm | 3.68e-11 | 86 |
structure with developmental contribution from neural crest | 1.83e-09 | 132 |
pre-chordal neural plate | 3.12e-09 | 61 |
central nervous system | 5.59e-09 | 81 |
ecto-epithelium | 1.13e-08 | 104 |
neural tube | 1.39e-08 | 56 |
neural rod | 1.39e-08 | 56 |
future spinal cord | 1.39e-08 | 56 |
neural keel | 1.39e-08 | 56 |
vasculature of eye | 6.50e-08 | 6 |
uvea | 6.50e-08 | 6 |
vasculature of head | 6.50e-08 | 6 |
nervous system | 8.00e-08 | 89 |
male genital duct | 8.34e-08 | 3 |
internal male genitalia | 8.34e-08 | 3 |
regional part of nervous system | 1.57e-07 | 53 |
regional part of brain | 1.57e-07 | 53 |
pigment epithelium of eye | 2.60e-07 | 11 |