FFCP PHASE1:Hg19::chr19:35819973..35819984,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=933 | |EntrezGene=933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1643 | |HGNC=1643 | ||
|TSSclassifier=strong | |||
|UniProt=P20273,F5H7U3,F5GYU4,Q32M46,Q0EAF5 | |UniProt=P20273,F5H7U3,F5GYU4,Q32M46,Q0EAF5 | ||
|association_with_transcript=-87bp_to_ENST00000085219,ENST00000341773,ENST00000536635,ENST00000544992,NM_001185099,NM_001185100,NM_001185101,NM_001771_5end | |association_with_transcript=-87bp_to_ENST00000085219,ENST00000341773,ENST00000536635,ENST00000544992,NM_001185099,NM_001185100,NM_001185101,NM_001771_5end | ||
|cluster_id=chr19:35819973..35819984,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_4_at_CD22_5end | |description=CAGE_peak_4_at_CD22_5end | ||
|id=chr19:35819973..35819984,+ | |id=chr19:35819973..35819984,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.79e-53!24;CL:0000826!6.79e-53!24;CL:0002274!8.55e-30!5;CL:0000457!8.55e-30!5;CL:0002191!8.55e-30!5;CL:0000097!8.55e-30!5;CL:0000831!8.55e-30!5;CL:0002028!8.55e-30!5;CL:0000838!2.00e-23!52;CL:0000542!6.01e-23!53;CL:0000051!6.01e-23!53;CL:0000163!1.10e-16!9;CL:0002031!3.56e-16!124;CL:0000738!4.89e-16!140;CL:0002032!3.37e-13!165;CL:0000837!3.37e-13!165;CL:0000037!1.50e-12!172;CL:0000566!1.50e-12!172;CL:0000988!1.04e-11!182;CL:0000236!9.08e-11!14;CL:0000946!1.57e-10!1;CL:0000786!1.57e-10!1;CL:0000980!1.57e-10!1;CL:0002087!4.76e-09!119 | |ontology_enrichment_celltype=CL:0000945!6.79e-53!24;CL:0000826!6.79e-53!24;CL:0002274!8.55e-30!5;CL:0000457!8.55e-30!5;CL:0002191!8.55e-30!5;CL:0000097!8.55e-30!5;CL:0000831!8.55e-30!5;CL:0002028!8.55e-30!5;CL:0000838!2.00e-23!52;CL:0000542!6.01e-23!53;CL:0000051!6.01e-23!53;CL:0000163!1.10e-16!9;CL:0002031!3.56e-16!124;CL:0000738!4.89e-16!140;CL:0002032!3.37e-13!165;CL:0000837!3.37e-13!165;CL:0000037!1.50e-12!172;CL:0000566!1.50e-12!172;CL:0000988!1.04e-11!182;CL:0000236!9.08e-11!14;CL:0000946!1.57e-10!1;CL:0000786!1.57e-10!1;CL:0000980!1.57e-10!1;CL:0002087!4.76e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.33e-32;5!CL:0000163;1.18e-18;9!CL:0000945;1.28e-15;24!CL:0000542;2.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.05e-32,5;CL:0002028,1.05e-32,5;CL:0000163,1.03e-18,9;CL:0000945,1.38e-15,24;CL:0000826,1.38e-15,24;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136;CL:0000838,1.26e-07,52;CL:0000542,1.70e-07,53;CL:0000051,1.70e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000051;2.01e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.02e-15!10;DOID:2355!9.84e-11!1;DOID:630!1.30e-10!1;DOID:0050177!1.30e-10!1;DOID:0050427!1.30e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.81e-40;1!DOID:74;5.15e-21;2!DOID:0060058;8.13e-17;10!DOID:1287;3.26e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.30e-40,1;DOID:74,6.96e-21,2;DOID:0060058,8.81e-17,10;DOID:1287,3.79e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0002106!8.87e-13!3;UBERON:0004854!8.87e-13!3;UBERON:0009034!8.87e-13!3;UBERON:0002095!8.87e-13!3;UBERON:0004782!8.87e-13!3;UBERON:0003281!8.87e-13!3;UBERON:0009664!8.87e-13!3;UBERON:0002296!8.87e-13!3;UBERON:0005602!8.87e-13!3;UBERON:0001179!8.87e-13!3;UBERON:0006293!8.87e-13!3;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,1.16200800870452,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,4.13827639862162,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,1.16200800870452,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,4.13827639862162,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p4@CD22 | |short_description=p4@CD22 | ||
}} | }} |
Latest revision as of 11:54, 17 September 2015
Short description: | p4@CD22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD22_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -87bp_to_ENST00000085219, ENST00000341773, ENST00000536635, ENST00000544992, NM_001185099, NM_001185100, NM_001185101, NM_001771_5end |
EntrezGene: | CD22 |
HGNC: | 1643 |
UniProt: | P20273F5H7U3F5GYU4Q32M46Q0EAF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.05e-32 | 5 |
basophil mast progenitor cell | 1.05e-32 | 5 |
endocrine cell | 1.03e-18 | 9 |
lymphocyte of B lineage | 1.38e-15 | 24 |
pro-B cell | 1.38e-15 | 24 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
lymphoid lineage restricted progenitor cell | 1.26e-07 | 52 |
lymphocyte | 1.70e-07 | 53 |
common lymphoid progenitor | 1.70e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.30e-40 | 1 |
hematopoietic system disease | 6.96e-21 | 2 |
lymphoma | 8.81e-17 | 10 |
cardiovascular system disease | 3.79e-11 | 4 |