FFCP PHASE1:Hg19::chr19:35819896..35819919,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:35819896..35819919,+
|short_description=p2@CD22
|description=CAGE_peak_2_at_CD22_5end
|association_with_transcript=-152bp_to_ENST00000085219,ENST000003417...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=933 | |EntrezGene=933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1643 | |HGNC=1643 | ||
|TSSclassifier=strong | |||
|UniProt=P20273,F5H7U3,F5GYU4,Q32M46,Q0EAF5 | |UniProt=P20273,F5H7U3,F5GYU4,Q32M46,Q0EAF5 | ||
|association_with_transcript=-152bp_to_ENST00000085219,ENST00000341773,ENST00000536635,ENST00000544992,NM_001185099,NM_001185100,NM_001185101,NM_001771_5end | |||
|cluster_id=chr19:35819896..35819919,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_2_at_CD22_5end | |||
|id=chr19:35819896..35819919,+ | |||
|ontology_enrichment_celltype=CL:0002274!4.09e-35!5;CL:0000457!4.09e-35!5;CL:0002191!4.09e-35!5;CL:0000097!4.09e-35!5;CL:0000831!4.09e-35!5;CL:0002028!4.09e-35!5;CL:0000163!1.87e-19!9;CL:0000945!4.13e-17!24;CL:0000826!4.13e-17!24;CL:0002031!6.40e-16!124;CL:0000738!1.11e-13!140;CL:0002032!4.77e-11!165;CL:0000837!4.77e-11!165;CL:0000037!1.90e-10!172;CL:0000566!1.90e-10!172;CL:0000988!1.14e-09!182;CL:0000839!1.20e-09!70;CL:0000557!1.74e-09!71;CL:0000766!9.66e-09!76;CL:0002087!2.66e-08!119;CL:0000946!3.58e-08!1;CL:0000786!3.58e-08!1;CL:0000980!3.58e-08!1;CL:0000838!2.81e-07!52;CL:0000542!4.05e-07!53;CL:0000051!4.05e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.20e-109;5!CL:0000163;3.50e-61;9!CL:0000945;5.30e-15;24!CL:0000151;2.73e-14;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.51e-109,5;CL:0002028,1.51e-109,5;CL:0000163,3.97e-61,9;CL:0000151,1.49e-15,36;CL:0000945,5.12e-15,24;CL:0000826,5.12e-15,24;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0000839,1.96e-08,66;CL:0000557,2.60e-08,67;CL:0000766,9.48e-08,72;CL:0000838,3.94e-07,52;CL:0000542,5.29e-07,53;CL:0000051,5.29e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2355!2.35e-08!1;DOID:630!2.71e-08!1;DOID:0050177!2.71e-08!1;DOID:0050427!2.71e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:630;3.67e-23;1!DOID:0050177;3.67e-23;1!DOID:0050427;3.67e-23;1!DOID:2355;3.67e-23;1!DOID:74;2.74e-12;2!DOID:1287;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.28e-23,1;DOID:630,5.13e-23,1;DOID:0050177,5.13e-23,1;DOID:0050427,5.13e-23,1;DOID:74,2.59e-12,2;DOID:1287,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.24e-09!112;UBERON:0002405!1.05e-08!115;UBERON:0002371!3.26e-08!80;UBERON:0000029!3.34e-08!1;UBERON:0001301!7.10e-08!1;UBERON:0002038!9.29e-08!1;UBERON:0009661!9.29e-08!1;UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1;UBERON:0001474!1.63e-07!86;UBERON:0002390!2.79e-07!102;UBERON:0003061!2.79e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.37e-07,76;UBERON:0001474,7.97e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.410502947249729,1.33808328233255,0,0,0,0,0,0,0.232401601740905,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8826118063351,9.86142460948132,1.4512968087854,1.00883967391873,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.410502947249729,1.33808328233255,0,0,0,0,0,0,0.232401601740905,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8826118063351,9.86142460948132,1.4512968087854,1.00883967391873,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | ||
|short_description=p2@CD22 | |||
}} | }} |
Latest revision as of 11:53, 17 September 2015
Short description: | p2@CD22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD22_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -152bp_to_ENST00000085219, ENST00000341773, ENST00000536635, ENST00000544992, NM_001185099, NM_001185100, NM_001185101, NM_001771_5end |
EntrezGene: | CD22 |
HGNC: | 1643 |
UniProt: | P20273F5H7U3F5GYU4Q32M46Q0EAF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.51e-109 | 5 |
basophil mast progenitor cell | 1.51e-109 | 5 |
endocrine cell | 3.97e-61 | 9 |
secretory cell | 1.49e-15 | 36 |
lymphocyte of B lineage | 5.12e-15 | 24 |
pro-B cell | 5.12e-15 | 24 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
myeloid lineage restricted progenitor cell | 1.96e-08 | 66 |
granulocyte monocyte progenitor cell | 2.60e-08 | 67 |
myeloid leukocyte | 9.48e-08 | 72 |
lymphoid lineage restricted progenitor cell | 3.94e-07 | 52 |
lymphocyte | 5.29e-07 | 53 |
common lymphoid progenitor | 5.29e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.37e-07 | 76 |
bone element | 7.97e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.28e-23 | 1 |
genetic disease | 5.13e-23 | 1 |
monogenic disease | 5.13e-23 | 1 |
xeroderma pigmentosum | 5.13e-23 | 1 |
hematopoietic system disease | 2.59e-12 | 2 |
cardiovascular system disease | 8.61e-07 | 4 |