FFCP PHASE1:Hg19::chr16:67678818..67678848,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146206 | |EntrezGene=146206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27089 | |HGNC=27089 | ||
|TSSclassifier=strong | |||
|UniProt=Q6F5E8,E7EW12 | |UniProt=Q6F5E8,E7EW12 | ||
|association_with_transcript=-181bp_to_ENST00000334583,ENST00000398282,NM_001013838,uc002etn.2,uc010cel.1,uc010vjr.1_5end | |association_with_transcript=-181bp_to_ENST00000334583,ENST00000398282,NM_001013838,uc002etn.2,uc010cel.1,uc010vjr.1_5end | ||
|cluster_id=chr16:67678818..67678848,+ | |||
|description=CAGE_peak_4_at_RLTPR_5end | |description=CAGE_peak_4_at_RLTPR_5end | ||
|id=chr16:67678818..67678848,+ | |id=chr16:67678818..67678848,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.58e-32!53;CL:0000051!1.58e-32!53;CL:0000838!1.52e-31!52;CL:0000945!4.05e-18!24;CL:0000826!4.05e-18!24;CL:0000037!2.51e-16!172;CL:0000566!2.51e-16!172;CL:0000988!3.07e-16!182;CL:0002032!1.23e-13!165;CL:0000837!1.23e-13!165;CL:0000084!7.54e-13!25;CL:0000827!7.54e-13!25;CL:0000738!1.67e-11!140;CL:0000236!3.08e-11!14;CL:0000791!1.72e-10!18;CL:0000789!1.72e-10!18;CL:0002420!1.72e-10!18;CL:0002419!1.72e-10!18;CL:0000790!1.72e-10!18;CL:0002087!9.94e-10!119;CL:0002031!3.58e-09!124;CL:0000039!6.93e-07!7;CL:0000586!6.93e-07!7 | |ontology_enrichment_celltype=CL:0000542!1.58e-32!53;CL:0000051!1.58e-32!53;CL:0000838!1.52e-31!52;CL:0000945!4.05e-18!24;CL:0000826!4.05e-18!24;CL:0000037!2.51e-16!172;CL:0000566!2.51e-16!172;CL:0000988!3.07e-16!182;CL:0002032!1.23e-13!165;CL:0000837!1.23e-13!165;CL:0000084!7.54e-13!25;CL:0000827!7.54e-13!25;CL:0000738!1.67e-11!140;CL:0000236!3.08e-11!14;CL:0000791!1.72e-10!18;CL:0000789!1.72e-10!18;CL:0002420!1.72e-10!18;CL:0002419!1.72e-10!18;CL:0000790!1.72e-10!18;CL:0002087!9.94e-10!119;CL:0002031!3.58e-09!124;CL:0000039!6.93e-07!7;CL:0000586!6.93e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.84e-29;24!CL:0000542;3.92e-23;53!CL:0000236;2.98e-14;13!CL:0000084;1.17e-10;25!CL:0002322;1.60e-10;5!CL:0000039;6.25e-07;7!CL:0000586;6.25e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.42e-37,53;CL:0000051,2.42e-37,53;CL:0000838,1.15e-35,52;CL:0000945,1.06e-29,24;CL:0000826,1.06e-29,24;CL:0000988,1.02e-16,177;CL:0000236,8.56e-16,14;CL:0000037,2.06e-15,168;CL:0000738,2.22e-13,136;CL:0002032,6.87e-13,161;CL:0000837,6.87e-13,161;CL:0002087,1.41e-12,115;CL:0002031,2.01e-12,120;CL:0002322,1.90e-10,5;CL:0000084,2.25e-10,25;CL:0000827,2.25e-10,25;CL:0000039,6.13e-07,7;CL:0000586,6.13e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000051;3.92e-23;53 | |||
|ontology_enrichment_disease=DOID:2531!2.72e-11!51;DOID:0060083!2.72e-11!51;DOID:1240!7.39e-08!39 | |ontology_enrichment_disease=DOID:2531!2.72e-11!51;DOID:0060083!2.72e-11!51;DOID:1240!7.39e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.40e-10;10!DOID:2531;1.70e-07;51!DOID:0060083;1.70e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.08e-11,51;DOID:0060083,2.08e-11,51;DOID:0060058,2.75e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.51e-08!15;UBERON:0000179!2.51e-08!15;UBERON:0000463!2.51e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!2.51e-08!15;UBERON:0000179!2.51e-08!15;UBERON:0000463!2.51e-08!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.36e-09,4;UBERON:0005058,4.36e-09,4;UBERON:0009113,4.36e-09,4;UBERON:0003295,4.36e-09,4;UBERON:0005562,4.36e-09,4;UBERON:0004177,2.63e-07,7;UBERON:0005057,2.63e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.88831355734875,1.57421562627358,0,0,0.154816123316076,0,0,0,5.34523684004081,5.2602616020346,2.64240395401362,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,1.28019066769952,2.40237592221607,2.29900975981793,1.98313461835459,3.81621501814146,6.83055562931338,0.587237189370939,1.91136614062614,1.32171328579026,1.68152568894461,2.10707267820062,0.983548850569165,1.17903228824749,1.02800749499755,1.67186495390678,0.977766799900771,1.89379122293893,3.89653456815823,1.00269411196656,0.294605907474837,0.664601683750863,0.270803863765016,0.896639238079726,0.390178042679635,0.493313713811028,0.276350017785848,0.579606171470105,1.18629250529648,1.60524496853828,2.09071047609954,1.24640276967323,1.14966148080576,0.34362744548263,0.759059076058509,0.637130828648193,1.95325036156926,0,0.903450714466637,1.15187950038977,0,0.473554504088034,0.821127996921047,1.81446068902259,2.13952156626806,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,1.90792499444274,1.14398982156026,2.22874500797739,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,3.71083351300159,2.78865462886844,1.55491582523056,1.00928340350251,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73902029239046,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,1.29707958075265,1.2624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50970464756633,0.788123040807709,0.862510299438069,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.308061348417659,2.35304930753057,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,2.87953591160336,1.29694662238543,0.540031437238115,0.79312517629427,1.28188885352968,0,0,2.60124445176006,1.58696134274089,4.0550850708596,1.11598390910176,0.59873811429845,0.191505370132367,2.11673582723883,0.324621940274555,0.842391534340376,0,0.156679895773023,2.50634477090067,1.52362600021443,0,0,0.425846237690326,1.71752672377882,0,0,0,0,0,1.23087398947712,0,1.99843180798692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,2.21027132424918,0.755798243562828,0.102268682502155,1.47701766553283,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0,0,0,0.508507300585533,0,0.689486746482929,0,0.694499979733169,0,0,0,0,0,0.219385397153973,0,0,0,0,0.922255617552241,1.52587995496613,0.54323685961004,0,0,0,3.06579894587209,0.470940769185074,0.664846727600626,0,0,0,0,0.317873157960757,0,0,0.282706142867882,0.216388639742091,0.995261931078505,0,0,1.48260564340311,2.34771483998355,2.08843899010911,0,0,0.234264445725339,3.46664099509765,0,0,0,1.20990716048664,0,0.189559738885464,3.00646838828985,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0,0,0,0,0,0.441280633457501,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,1.03082936549324,3.08870996151536,0,0.869767748958028,0.471388069233591,0,0,0,0,0,0,6.38732940334862,0,1.31443677139657,0,0,0,0,0,0,0.0671834724867263,0,3.49487848582361,0.236349546921671,0.0824158583811665,0.26961417541674,0,2.79421995817089,0,0,1.92903778158023,3.85110422472255,4.98528405635022,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0.950403028674658,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.992332043623902,1.97611631897944,1.94868157409433,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0.470531639396343,7.02502358710322,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,1.39991177098451,0,0,0.567515953566836,0,0,0,0.895260599125562,0,0,0.327628914576042,0,0,0,0,0,4.81056644507645,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,1.03710588800201,0,0,0,0.118193840883968,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,1.16969731731053,1.19370465096821,0,0.33883824611688,1.20934568419972,2.2644426535001,0.0771741581079447,0,1.41095188908457,0,0.235676547101626,0,0,0,0,1.12780701575824,0.386747327841463,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,1.38783067318587,1.31118686356435,0.506794004045748,1.52983244612973,4.27547848424897,1.28652859348783,1.25353769646188,0.227336094654718,0,0,0,0,0,3.93992349999637,2.17261500035503,0,0,0,0,0,1.41439311330634,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,1.61019034872821,1.9234109538194 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.88831355734875,1.57421562627358,0,0,0.154816123316076,0,0,0,5.34523684004081,5.2602616020346,2.64240395401362,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,1.28019066769952,2.40237592221607,2.29900975981793,1.98313461835459,3.81621501814146,6.83055562931338,0.587237189370939,1.91136614062614,1.32171328579026,1.68152568894461,2.10707267820062,0.983548850569165,1.17903228824749,1.02800749499755,1.67186495390678,0.977766799900771,1.89379122293893,3.89653456815823,1.00269411196656,0.294605907474837,0.664601683750863,0.270803863765016,0.896639238079726,0.390178042679635,0.493313713811028,0.276350017785848,0.579606171470105,1.18629250529648,1.60524496853828,2.09071047609954,1.24640276967323,1.14966148080576,0.34362744548263,0.759059076058509,0.637130828648193,1.95325036156926,0,0.903450714466637,1.15187950038977,0,0.473554504088034,0.821127996921047,1.81446068902259,2.13952156626806,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,1.90792499444274,1.14398982156026,2.22874500797739,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,3.71083351300159,2.78865462886844,1.55491582523056,1.00928340350251,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73902029239046,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,1.29707958075265,1.2624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50970464756633,0.788123040807709,0.862510299438069,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.308061348417659,2.35304930753057,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,2.87953591160336,1.29694662238543,0.540031437238115,0.79312517629427,1.28188885352968,0,0,2.60124445176006,1.58696134274089,4.0550850708596,1.11598390910176,0.59873811429845,0.191505370132367,2.11673582723883,0.324621940274555,0.842391534340376,0,0.156679895773023,2.50634477090067,1.52362600021443,0,0,0.425846237690326,1.71752672377882,0,0,0,0,0,1.23087398947712,0,1.99843180798692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,2.21027132424918,0.755798243562828,0.102268682502155,1.47701766553283,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0,0,0,0.508507300585533,0,0.689486746482929,0,0.694499979733169,0,0,0,0,0,0.219385397153973,0,0,0,0,0.922255617552241,1.52587995496613,0.54323685961004,0,0,0,3.06579894587209,0.470940769185074,0.664846727600626,0,0,0,0,0.317873157960757,0,0,0.282706142867882,0.216388639742091,0.995261931078505,0,0,1.48260564340311,2.34771483998355,2.08843899010911,0,0,0.234264445725339,3.46664099509765,0,0,0,1.20990716048664,0,0.189559738885464,3.00646838828985,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0,0,0,0,0,0.441280633457501,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,1.03082936549324,3.08870996151536,0,0.869767748958028,0.471388069233591,0,0,0,0,0,0,6.38732940334862,0,1.31443677139657,0,0,0,0,0,0,0.0671834724867263,0,3.49487848582361,0.236349546921671,0.0824158583811665,0.26961417541674,0,2.79421995817089,0,0,1.92903778158023,3.85110422472255,4.98528405635022,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0.950403028674658,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.992332043623902,1.97611631897944,1.94868157409433,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0.470531639396343,7.02502358710322,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,1.39991177098451,0,0,0.567515953566836,0,0,0,0.895260599125562,0,0,0.327628914576042,0,0,0,0,0,4.81056644507645,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,1.03710588800201,0,0,0,0.118193840883968,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,1.16969731731053,1.19370465096821,0,0.33883824611688,1.20934568419972,2.2644426535001,0.0771741581079447,0,1.41095188908457,0,0.235676547101626,0,0,0,0,1.12780701575824,0.386747327841463,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,1.38783067318587,1.31118686356435,0.506794004045748,1.52983244612973,4.27547848424897,1.28652859348783,1.25353769646188,0.227336094654718,0,0,0,0,0,3.93992349999637,2.17261500035503,0,0,0,0,0,1.41439311330634,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,1.61019034872821,1.9234109538194 | ||
|short_description=p4@RLTPR | |short_description=p4@RLTPR | ||
}} | }} |
Latest revision as of 11:50, 17 September 2015
Short description: | p4@RLTPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RLTPR_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000334583, ENST00000398282, NM_001013838, uc002etn.2, uc010cel.1, uc010vjr.1_5end |
EntrezGene: | RLTPR |
HGNC: | 27089 |
UniProt: | Q6F5E8E7EW12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.42e-37 | 53 |
common lymphoid progenitor | 2.42e-37 | 53 |
lymphoid lineage restricted progenitor cell | 1.15e-35 | 52 |
lymphocyte of B lineage | 1.06e-29 | 24 |
pro-B cell | 1.06e-29 | 24 |
hematopoietic cell | 1.02e-16 | 177 |
B cell | 8.56e-16 | 14 |
hematopoietic stem cell | 2.06e-15 | 168 |
leukocyte | 2.22e-13 | 136 |
hematopoietic oligopotent progenitor cell | 6.87e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.87e-13 | 161 |
nongranular leukocyte | 1.41e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.01e-12 | 120 |
embryonic stem cell | 1.90e-10 | 5 |
T cell | 2.25e-10 | 25 |
pro-T cell | 2.25e-10 | 25 |
germ line cell | 6.13e-07 | 7 |
germ cell | 6.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.36e-09 | 4 |
hemolymphoid system gland | 4.36e-09 | 4 |
thymic region | 4.36e-09 | 4 |
pharyngeal gland | 4.36e-09 | 4 |
thymus primordium | 4.36e-09 | 4 |
hemopoietic organ | 2.63e-07 | 7 |
immune organ | 2.63e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.08e-11 | 51 |
immune system cancer | 2.08e-11 | 51 |
lymphoma | 2.75e-10 | 10 |