FFCP PHASE1:Hg19::chr11:27062521..27062534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8424 | |EntrezGene=8424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=964 | |HGNC=964 | ||
|TSSclassifier=strong | |||
|UniProt=O75936 | |UniProt=O75936 | ||
|association_with_transcript=12bp_to_ENST00000263182,NM_003986,uc001mre.1_5end | |association_with_transcript=12bp_to_ENST00000263182,NM_003986,uc001mre.1_5end | ||
|cluster_id=chr11:27062521..27062534,+ | |||
|coexpression_cluster_id=C2123 | |||
|description=CAGE_peak_11_at_BBOX1_5end | |description=CAGE_peak_11_at_BBOX1_5end | ||
|id=chr11:27062521..27062534,+ | |id=chr11:27062521..27062534,+ | ||
|ontology_enrichment_celltype=CL:0001014!7.61e-08!2;CL:0001016!7.61e-08!2;CL:0000622!3.75e-07!5;CL:0002076!3.78e-07!43 | |ontology_enrichment_celltype=CL:0001014!7.61e-08!2;CL:0001016!7.61e-08!2;CL:0000622!3.75e-07!5;CL:0002076!3.78e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002623;6.44e-23;3!CL:0000622;3.60e-14;5!CL:0000154;5.68e-12;6!CL:0000150;2.75e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.15e-23,3;CL:0000622,3.15e-14,5;CL:0000154,5.08e-12,6;CL:0000150,2.55e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.75e-18;1!UBERON:0007123;3.60e-14;5!UBERON:0008814;1.33e-09;2!UBERON:0010056;1.33e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!3.16e-10!11;UBERON:0000007!1.22e-08!2;UBERON:0000341!3.95e-08!2;UBERON:0001042!4.13e-08!10;UBERON:0009145!4.13e-08!10;UBERON:0000974!6.00e-08!10;UBERON:0007023!9.21e-08!115;UBERON:0008814!9.85e-08!15;UBERON:0002530!6.68e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.11e-34;2!UBERON:0001723;4.60e-23;3!UBERON:0001033;4.60e-23;3!UBERON:0003296;6.79e-18;4!UBERON:0010133;6.79e-18;4!UBERON:0002046;3.60e-14;5!UBERON:0001044;5.68e-12;6!UBERON:0003293;5.68e-12;6!UBERON:0003294;5.68e-12;6!UBERON:0010047;5.68e-12;6!UBERON:0003408;5.68e-12;6!UBERON:0000167;5.68e-12;6!UBERON:0001041;2.62e-11;14!UBERON:0001894;1.21e-10;7!UBERON:0000165;8.81e-10;28!UBERON:0000341;1.71e-09;2!UBERON:0002368;2.07e-07;33!UBERON:0001043;6.50e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.11e-34,2;UBERON:0001723,5.15e-23,3;UBERON:0001033,5.15e-23,3;UBERON:0010056,5.15e-23,3;UBERON:0003296,6.79e-18,4;UBERON:0010133,6.79e-18,4;UBERON:0008814,4.74e-15,18;UBERON:0002046,3.15e-14,5;UBERON:0004117,3.15e-14,5;UBERON:0007689,3.15e-14,5;UBERON:0007123,3.15e-14,5;UBERON:0003091,3.15e-14,5;UBERON:0000166,2.23e-12,22;UBERON:0001044,5.08e-12,6;UBERON:0003293,5.08e-12,6;UBERON:0003294,5.08e-12,6;UBERON:0010047,5.08e-12,6;UBERON:0000167,5.08e-12,6;UBERON:0001894,1.21e-10,7;UBERON:0006222,1.21e-10,7;UBERON:0002530,5.40e-10,59;UBERON:0000165,1.83e-09,29;UBERON:0000930,1.83e-09,29;UBERON:0000341,1.86e-09,2;UBERON:0002368,5.77e-08,35;UBERON:0000161,1.13e-07,36;UBERON:0003408,1.42e-07,10;UBERON:0001042,1.42e-07,10;UBERON:0009145,1.42e-07,10;UBERON:0006562,5.81e-07,11;UBERON:0009722,5.81e-07,11;UBERON:0007690,5.81e-07,11;UBERON:0001043,6.50e-07,3;UBERON:0009143,6.50e-07,3 | |||
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| ||
|short_description=p11@BBOX1 | |short_description=p11@BBOX1 | ||
}} | }} |
Latest revision as of 11:46, 17 September 2015
Short description: | p11@BBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_BBOX1_5end |
Coexpression cluster: | C2123_pituitary_thyroid_esophagus_kidney_tongue_salivary_throat |
Association with transcript: | 12bp_to_ENST00000263182, NM_003986, uc001mre.1_5end |
EntrezGene: | BBOX1 |
HGNC: | 964 |
UniProt: | O75936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.15e-23 | 3 |
acinar cell | 3.15e-14 | 5 |
protein secreting cell | 5.08e-12 | 6 |
glandular epithelial cell | 2.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.11e-34 | 2 |
tongue | 5.15e-23 | 3 |
gustatory system | 5.15e-23 | 3 |
future tongue | 5.15e-23 | 3 |
gland of diencephalon | 6.79e-18 | 4 |
neuroendocrine gland | 6.79e-18 | 4 |
pharyngeal arch system | 4.74e-15 | 18 |
thyroid gland | 3.15e-14 | 5 |
pharyngeal pouch | 3.15e-14 | 5 |
thyroid diverticulum | 3.15e-14 | 5 |
pharyngeal pouch 2 | 3.15e-14 | 5 |
thyroid primordium | 3.15e-14 | 5 |
oral opening | 2.23e-12 | 22 |
saliva-secreting gland | 5.08e-12 | 6 |
gland of oral region | 5.08e-12 | 6 |
gland of foregut | 5.08e-12 | 6 |
oral gland | 5.08e-12 | 6 |
oral cavity | 5.08e-12 | 6 |
diencephalon | 1.21e-10 | 7 |
future diencephalon | 1.21e-10 | 7 |
gland | 5.40e-10 | 59 |
mouth | 1.83e-09 | 29 |
stomodeum | 1.83e-09 | 29 |
throat | 1.86e-09 | 2 |
endocrine gland | 5.77e-08 | 35 |
orifice | 1.13e-07 | 36 |
gland of gut | 1.42e-07 | 10 |
chordate pharynx | 1.42e-07 | 10 |
pharyngeal region of foregut | 1.42e-07 | 10 |
pharynx | 5.81e-07 | 11 |
entire pharyngeal arch endoderm | 5.81e-07 | 11 |
early pharyngeal endoderm | 5.81e-07 | 11 |
esophagus | 6.50e-07 | 3 |
esophageal region | 6.50e-07 | 3 |