FFCP PHASE1:Hg19::chr2:47205250..47205266,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:47205250..47205266,+
|short_description=p6@TTC7A
|description=CAGE_peak_6_at_TTC7A_5end
|association_with_transcript=0bp_to_ENST00000474321_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57217 | |EntrezGene=57217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19750 | |HGNC=19750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474321_5end | |||
|cluster_id=chr2:47205250..47205266,+ | |||
|coexpression_cluster_id=C2701 | |||
|description=CAGE_peak_6_at_TTC7A_5end | |||
|id=chr2:47205250..47205266,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.39e-70!63;CL:0000576!4.39e-70!63;CL:0000040!4.39e-70!63;CL:0000559!4.39e-70!63;CL:0002009!1.97e-67!65;CL:0000557!3.48e-63!71;CL:0000766!1.12e-62!76;CL:0000839!1.86e-61!70;CL:0002057!1.72e-58!42;CL:0000763!2.91e-54!112;CL:0000049!2.91e-54!112;CL:0000860!1.03e-53!45;CL:0002087!4.74e-50!119;CL:0000037!7.09e-49!172;CL:0000566!7.09e-49!172;CL:0000988!2.61e-46!182;CL:0000738!5.80e-46!140;CL:0002032!6.50e-44!165;CL:0000837!6.50e-44!165;CL:0002031!1.70e-40!124;CL:0000134!3.36e-12!358;CL:0002320!1.40e-11!365;CL:0000219!1.98e-09!390;CL:0000034!7.53e-08!444;CL:0000048!8.71e-08!430;CL:0000723!2.03e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.93e-103;33!CL:0002057;8.93e-103;33!CL:0000473;5.75e-76;39!CL:0000234;5.75e-76;39!CL:0000576;2.92e-56;48!CL:0000766;7.35e-31;69!CL:0000763;4.98e-25;100!CL:0002087;1.38e-14;104!CL:0000738;1.12e-11;136!CL:0000988;3.59e-08;177!CL:0000840;8.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.60e-91,59;CL:0000576,3.60e-91,59;CL:0000040,3.60e-91,59;CL:0000559,3.60e-91,59;CL:0002009,5.94e-88,61;CL:0000860,1.25e-86,42;CL:0002057,1.25e-86,42;CL:0000557,5.03e-84,67;CL:0000839,9.48e-81,66;CL:0000473,6.68e-80,48;CL:0000234,6.68e-80,48;CL:0000766,2.09e-73,72;CL:0000763,6.70e-71,108;CL:0000049,6.70e-71,108;CL:0002032,7.50e-47,161;CL:0000837,7.50e-47,161;CL:0000037,1.08e-46,168;CL:0002087,1.79e-45,115;CL:0000988,7.42e-44,177;CL:0002031,3.11e-43,120;CL:0000738,3.69e-37,136;CL:0000134,3.36e-17,354;CL:0002320,1.12e-16,361;CL:0000219,7.67e-15,386;CL:0000034,1.01e-12,441;CL:0000048,1.36e-12,427;CL:0000723,2.78e-12,433;CL:0000840,8.40e-07,5;CL:0001029,8.40e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.11e-65;42!CL:0000049;2.69e-22;108 | |||
|ontology_enrichment_disease=DOID:2531!3.71e-07!51;DOID:0060083!3.71e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.32e-11;31!DOID:1240;7.73e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.82e-11,31;DOID:1240,1.70e-10,39;DOID:2531,1.62e-07,51;DOID:0060083,1.62e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-63!102;UBERON:0003061!1.03e-63!102;UBERON:0002371!8.26e-59!80;UBERON:0002193!4.59e-58!112;UBERON:0001474!1.64e-53!86;UBERON:0002405!5.69e-45!115;UBERON:0004765!5.04e-43!101;UBERON:0001434!5.04e-43!101;UBERON:0003081!8.80e-21!216;UBERON:0002204!1.96e-20!167;UBERON:0002384!2.88e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.14e-77,76;UBERON:0001474,6.73e-71,82;UBERON:0004765,6.87e-64,90;UBERON:0002405,1.44e-61,93;UBERON:0002390,5.18e-58,98;UBERON:0003061,5.18e-58,98;UBERON:0001434,1.09e-56,100;UBERON:0002193,7.06e-52,108;UBERON:0002204,1.55e-30,167;UBERON:0003081,1.43e-23,203;UBERON:0002384,5.74e-16,371;UBERON:0000926,4.67e-12,315;UBERON:0004120,4.67e-12,315;UBERON:0006603,4.67e-12,315 | |||
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| ||
|short_description=p6@TTC7A | |||
}} | }} |
Latest revision as of 11:36, 17 September 2015
Short description: | p6@TTC7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TTC7A_5end |
Coexpression cluster: | C2701_acute_CD14_Dendritic_granulocyte_diffuse_CD19_biphenotypic |
Association with transcript: | 0bp_to_ENST00000474321_5end |
EntrezGene: | TTC7A |
HGNC: | 19750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.60e-91 | 59 |
monocyte | 3.60e-91 | 59 |
monoblast | 3.60e-91 | 59 |
promonocyte | 3.60e-91 | 59 |
macrophage dendritic cell progenitor | 5.94e-88 | 61 |
classical monocyte | 1.25e-86 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-86 | 42 |
granulocyte monocyte progenitor cell | 5.03e-84 | 67 |
myeloid lineage restricted progenitor cell | 9.48e-81 | 66 |
defensive cell | 6.68e-80 | 48 |
phagocyte | 6.68e-80 | 48 |
myeloid leukocyte | 2.09e-73 | 72 |
myeloid cell | 6.70e-71 | 108 |
common myeloid progenitor | 6.70e-71 | 108 |
hematopoietic oligopotent progenitor cell | 7.50e-47 | 161 |
hematopoietic multipotent progenitor cell | 7.50e-47 | 161 |
hematopoietic stem cell | 1.08e-46 | 168 |
nongranular leukocyte | 1.79e-45 | 115 |
hematopoietic cell | 7.42e-44 | 177 |
hematopoietic lineage restricted progenitor cell | 3.11e-43 | 120 |
leukocyte | 3.69e-37 | 136 |
mesenchymal cell | 3.36e-17 | 354 |
connective tissue cell | 1.12e-16 | 361 |
motile cell | 7.67e-15 | 386 |
stem cell | 1.01e-12 | 441 |
multi fate stem cell | 1.36e-12 | 427 |
somatic stem cell | 2.78e-12 | 433 |
immature conventional dendritic cell | 8.40e-07 | 5 |
common dendritic progenitor | 8.40e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.14e-77 | 76 |
bone element | 6.73e-71 | 82 |
skeletal element | 6.87e-64 | 90 |
immune system | 1.44e-61 | 93 |
hematopoietic system | 5.18e-58 | 98 |
blood island | 5.18e-58 | 98 |
skeletal system | 1.09e-56 | 100 |
hemolymphoid system | 7.06e-52 | 108 |
musculoskeletal system | 1.55e-30 | 167 |
lateral plate mesoderm | 1.43e-23 | 203 |
connective tissue | 5.74e-16 | 371 |
mesoderm | 4.67e-12 | 315 |
mesoderm-derived structure | 4.67e-12 | 315 |
presumptive mesoderm | 4.67e-12 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.82e-11 | 31 |
leukemia | 1.70e-10 | 39 |
hematologic cancer | 1.62e-07 | 51 |
immune system cancer | 1.62e-07 | 51 |