FFCP PHASE1:Hg19::chr1:155146318..155146384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80128 | |EntrezGene=80128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19019 | |HGNC=19019 | ||
|TSSclassifier=strong | |||
|UniProt=B1AVQ4,Q5VT61,F5GYK0,Q7Z4K8 | |UniProt=B1AVQ4,Q5VT61,F5GYK0,Q7Z4K8 | ||
|association_with_transcript=0bp_to_ENST00000368382,ENST00000368383,ENST00000368385,ENST00000392451,ENST00000474430,ENST00000545012,NM_025058,uc001fhq.2,uc001fhr.2,uc001fhs.1,uc001fht.1,uc001fhu.1,uc010pez.1,uc010pfa.1_5end | |association_with_transcript=0bp_to_ENST00000368382,ENST00000368383,ENST00000368385,ENST00000392451,ENST00000474430,ENST00000545012,NM_025058,uc001fhq.2,uc001fhr.2,uc001fhs.1,uc001fht.1,uc001fhu.1,uc010pez.1,uc010pfa.1_5end | ||
|cluster_id=chr1:155146318..155146384,+ | |||
|description=CAGE_peak_1_at_TRIM46_5end | |description=CAGE_peak_1_at_TRIM46_5end | ||
|id=chr1:155146318..155146384,+ | |id=chr1:155146318..155146384,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.21e-12!180;CL:0000133!2.61e-07!59;CL:0000393!6.21e-07!60;CL:0000211!6.21e-07!60 | |ontology_enrichment_celltype=CL:0000055!3.21e-12!180;CL:0000133!2.61e-07!59;CL:0000393!6.21e-07!60;CL:0000211!6.21e-07!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.56e-07,59;CL:0000393,7.23e-07,61;CL:0000211,7.23e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.67e-24!94;UBERON:0001016!1.67e-24!94;UBERON:0005743!2.43e-22!86;UBERON:0001017!3.77e-22!82;UBERON:0001049!3.22e-20!57;UBERON:0005068!3.22e-20!57;UBERON:0006241!3.22e-20!57;UBERON:0007135!3.22e-20!57;UBERON:0000955!3.54e-19!69;UBERON:0006238!3.54e-19!69;UBERON:0001893!7.29e-18!34;UBERON:0002616!1.25e-17!59;UBERON:0002020!1.32e-17!34;UBERON:0003528!1.32e-17!34;UBERON:0002791!2.99e-17!33;UBERON:0001869!4.52e-17!32;UBERON:0002780!1.98e-16!41;UBERON:0001890!1.98e-16!41;UBERON:0006240!1.98e-16!41;UBERON:0002346!3.58e-16!90;UBERON:0003080!8.05e-16!42;UBERON:0003075!1.38e-15!86;UBERON:0007284!1.38e-15!86;UBERON:0000483!5.25e-15!309;UBERON:0000119!1.35e-14!312;UBERON:0000924!3.13e-14!173;UBERON:0006601!3.13e-14!173;UBERON:0000025!4.12e-14!194;UBERON:0004121!1.24e-13!169;UBERON:0003056!1.49e-13!61;UBERON:0000956!1.65e-13!25;UBERON:0000203!1.65e-13!25;UBERON:0002619!3.81e-13!22;UBERON:0001950!4.77e-12!20;UBERON:0000153!1.06e-11!129;UBERON:0007811!1.06e-11!129;UBERON:0000033!2.53e-11!123;UBERON:0004111!2.26e-10!241;UBERON:0000475!2.64e-10!365;UBERON:0000477!4.48e-08!286 | |ontology_enrichment_uberon=UBERON:0000073!1.67e-24!94;UBERON:0001016!1.67e-24!94;UBERON:0005743!2.43e-22!86;UBERON:0001017!3.77e-22!82;UBERON:0001049!3.22e-20!57;UBERON:0005068!3.22e-20!57;UBERON:0006241!3.22e-20!57;UBERON:0007135!3.22e-20!57;UBERON:0000955!3.54e-19!69;UBERON:0006238!3.54e-19!69;UBERON:0001893!7.29e-18!34;UBERON:0002616!1.25e-17!59;UBERON:0002020!1.32e-17!34;UBERON:0003528!1.32e-17!34;UBERON:0002791!2.99e-17!33;UBERON:0001869!4.52e-17!32;UBERON:0002780!1.98e-16!41;UBERON:0001890!1.98e-16!41;UBERON:0006240!1.98e-16!41;UBERON:0002346!3.58e-16!90;UBERON:0003080!8.05e-16!42;UBERON:0003075!1.38e-15!86;UBERON:0007284!1.38e-15!86;UBERON:0000483!5.25e-15!309;UBERON:0000119!1.35e-14!312;UBERON:0000924!3.13e-14!173;UBERON:0006601!3.13e-14!173;UBERON:0000025!4.12e-14!194;UBERON:0004121!1.24e-13!169;UBERON:0003056!1.49e-13!61;UBERON:0000956!1.65e-13!25;UBERON:0000203!1.65e-13!25;UBERON:0002619!3.81e-13!22;UBERON:0001950!4.77e-12!20;UBERON:0000153!1.06e-11!129;UBERON:0007811!1.06e-11!129;UBERON:0000033!2.53e-11!123;UBERON:0004111!2.26e-10!241;UBERON:0000475!2.64e-10!365;UBERON:0000477!4.48e-08!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.37e-16;34!UBERON:0001869;3.40e-16;32!UBERON:0003528;5.04e-16;34!UBERON:0002020;5.04e-16;34!UBERON:0002791;5.84e-16;32!UBERON:0000956;2.77e-14;25!UBERON:0000203;2.77e-14;25!UBERON:0002619;4.46e-14;22!UBERON:0001950;6.38e-13;20!UBERON:0002780;2.96e-12;41!UBERON:0001890;2.96e-12;41!UBERON:0000073;3.86e-12;53!UBERON:0002616;3.86e-12;53!UBERON:0000955;3.21e-09;68!UBERON:0001016;1.36e-08;83!UBERON:0001017;2.50e-08;75 | |ontology_enrichment_uberon_v019=UBERON:0001893;2.37e-16;34!UBERON:0001869;3.40e-16;32!UBERON:0003528;5.04e-16;34!UBERON:0002020;5.04e-16;34!UBERON:0002791;5.84e-16;32!UBERON:0000956;2.77e-14;25!UBERON:0000203;2.77e-14;25!UBERON:0002619;4.46e-14;22!UBERON:0001950;6.38e-13;20!UBERON:0002780;2.96e-12;41!UBERON:0001890;2.96e-12;41!UBERON:0000073;3.86e-12;53!UBERON:0002616;3.86e-12;53!UBERON:0000955;3.21e-09;68!UBERON:0001016;1.36e-08;83!UBERON:0001017;2.50e-08;75 | ||
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| ||
|short_description=p1@TRIM46 | |short_description=p1@TRIM46 | ||
}} | }} |
Latest revision as of 11:33, 17 September 2015
Short description: | p1@TRIM46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM46_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368382, ENST00000368383, ENST00000368385, ENST00000392451, ENST00000474430, ENST00000545012, NM_025058, uc001fhq.2, uc001fhr.2, uc001fhs.1, uc001fht.1, uc001fhu.1, uc010pez.1, uc010pfa.1_5end |
EntrezGene: | TRIM46 |
HGNC: | 19019 |
UniProt: | B1AVQ4Q5VT61F5GYK0Q7Z4K8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.56e-07 | 59 |
electrically responsive cell | 7.23e-07 | 61 |
electrically active cell | 7.23e-07 | 61 |