FFCP PHASE1:Hg19::chr2:152146128..152146189,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:152146128..152146189,- to FFCP PHASE1:Hg19::chr2:152146128..152146189,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9111 | |EntrezGene=9111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7854 | |HGNC=7854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=187bp_to_ENST00000477072,ENST00000491771_5end | |||
|cluster_id=chr2:152146128..152146189,- | |||
|description=CAGE_peak_1_at_NMI_5end | |||
|id=chr2:152146128..152146189,- | |||
|ontology_enrichment_celltype=CL:0000037!5.38e-43!172;CL:0000566!5.38e-43!172;CL:0002032!9.16e-42!165;CL:0000837!9.16e-42!165;CL:0000763!5.03e-39!112;CL:0000049!5.03e-39!112;CL:0000988!2.21e-38!182;CL:0000738!5.32e-28!140;CL:0000766!2.48e-25!76;CL:0002031!2.86e-24!124;CL:0002087!3.26e-24!119;CL:0000839!1.10e-22!70;CL:0002194!3.27e-21!63;CL:0000576!3.27e-21!63;CL:0000040!3.27e-21!63;CL:0000559!3.27e-21!63;CL:0000557!6.52e-21!71;CL:0002009!1.56e-20!65;CL:0000860!5.85e-16!45;CL:0002057!1.82e-15!42;CL:0000134!3.26e-13!358;CL:0002320!5.75e-13!365;CL:0000048!2.03e-08!430;CL:0000063!3.42e-08!578;CL:0000034!3.56e-08!444;CL:0000723!1.24e-07!436;CL:0000219!2.10e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000763;1.14e-12;100!CL:0000576;4.10e-12;48!CL:0000860;6.88e-11;33!CL:0002057;6.88e-11;33!CL:0000473;1.50e-10;39!CL:0000234;1.50e-10;39!CL:0000766;2.39e-10;69!CL:0000988;5.44e-08;177!CL:0000738;1.20e-07;136!CL:0002087;2.26e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.04e-42,168;CL:0002032,4.96e-41,161;CL:0000837,4.96e-41,161;CL:0000763,1.75e-38,108;CL:0000049,1.75e-38,108;CL:0000988,1.73e-37,177;CL:0000738,2.52e-27,136;CL:0000766,7.26e-25,72;CL:0002031,1.26e-23,120;CL:0002087,1.41e-23,115;CL:0000839,3.21e-22,66;CL:0002194,8.92e-21,59;CL:0000576,8.92e-21,59;CL:0000040,8.92e-21,59;CL:0000559,8.92e-21,59;CL:0000557,2.04e-20,67;CL:0002009,4.54e-20,61;CL:0000473,8.03e-17,48;CL:0000234,8.03e-17,48;CL:0000860,1.81e-15,42;CL:0002057,1.81e-15,42;CL:0000134,1.39e-12,354;CL:0002320,2.43e-12,361;CL:0000048,4.69e-08,427;CL:0000034,8.19e-08,441;CL:0000723,2.76e-07,433;CL:0000219,5.95e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.44e-11;42!CL:0000049;3.73e-11;108 | |||
|ontology_enrichment_disease=DOID:2531!2.08e-20!51;DOID:0060083!2.08e-20!51;DOID:1240!2.87e-20!39;DOID:8692!3.32e-17!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.44e-17;31!DOID:1240;7.20e-16;39!DOID:2531;6.76e-13;51!DOID:0060083;6.76e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.06e-20,51;DOID:0060083,2.06e-20,51;DOID:1240,2.85e-20,39;DOID:8692,3.29e-17,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.92e-25!112;UBERON:0002390!1.04e-24!102;UBERON:0003061!1.04e-24!102;UBERON:0002371!1.15e-18!80;UBERON:0001474!3.53e-16!86;UBERON:0002405!1.52e-15!115;UBERON:0004765!1.24e-13!101;UBERON:0001434!1.24e-13!101;UBERON:0002384!9.11e-13!375;UBERON:0003081!7.70e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.77e-24,108;UBERON:0002390,3.75e-24,98;UBERON:0003061,3.75e-24,98;UBERON:0002405,2.12e-20,93;UBERON:0002371,3.85e-18,76;UBERON:0001474,1.17e-15,82;UBERON:0004765,9.28e-15,90;UBERON:0001434,3.55e-13,100;UBERON:0002384,3.83e-12,371;UBERON:0003081,2.32e-10,203 | |||
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| ||
|short_description=p1@NMI | |||
}} | }} |
Latest revision as of 11:30, 17 September 2015
Short description: | p1@NMI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NMI_5end |
Coexpression cluster: | NA |
Association with transcript: | 187bp_to_ENST00000477072, ENST00000491771_5end |
EntrezGene: | NMI |
HGNC: | 7854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.04e-42 | 168 |
hematopoietic oligopotent progenitor cell | 4.96e-41 | 161 |
hematopoietic multipotent progenitor cell | 4.96e-41 | 161 |
myeloid cell | 1.75e-38 | 108 |
common myeloid progenitor | 1.75e-38 | 108 |
hematopoietic cell | 1.73e-37 | 177 |
leukocyte | 2.52e-27 | 136 |
myeloid leukocyte | 7.26e-25 | 72 |
hematopoietic lineage restricted progenitor cell | 1.26e-23 | 120 |
nongranular leukocyte | 1.41e-23 | 115 |
myeloid lineage restricted progenitor cell | 3.21e-22 | 66 |
monopoietic cell | 8.92e-21 | 59 |
monocyte | 8.92e-21 | 59 |
monoblast | 8.92e-21 | 59 |
promonocyte | 8.92e-21 | 59 |
granulocyte monocyte progenitor cell | 2.04e-20 | 67 |
macrophage dendritic cell progenitor | 4.54e-20 | 61 |
defensive cell | 8.03e-17 | 48 |
phagocyte | 8.03e-17 | 48 |
classical monocyte | 1.81e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-15 | 42 |
mesenchymal cell | 1.39e-12 | 354 |
connective tissue cell | 2.43e-12 | 361 |
multi fate stem cell | 4.69e-08 | 427 |
stem cell | 8.19e-08 | 441 |
somatic stem cell | 2.76e-07 | 433 |
motile cell | 5.95e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.77e-24 | 108 |
hematopoietic system | 3.75e-24 | 98 |
blood island | 3.75e-24 | 98 |
immune system | 2.12e-20 | 93 |
bone marrow | 3.85e-18 | 76 |
bone element | 1.17e-15 | 82 |
skeletal element | 9.28e-15 | 90 |
skeletal system | 3.55e-13 | 100 |
connective tissue | 3.83e-12 | 371 |
lateral plate mesoderm | 2.32e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.06e-20 | 51 |
immune system cancer | 2.06e-20 | 51 |
leukemia | 2.85e-20 | 39 |
myeloid leukemia | 3.29e-17 | 31 |