FFCP PHASE1:Hg19::chr13:45048471..45048482,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:45048471..45048482,-
|short_description=p54@TSC22D1
|description=CAGE_peak_54_at_TSC22D1_5end
|association_with_transcript=-34bp_to_NM_001243798_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8848 | |EntrezGene=8848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |HGNC=16826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_NM_001243798_5end | |||
|cluster_id=chr13:45048471..45048482,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_54_at_TSC22D1_5end | |||
|id=chr13:45048471..45048482,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.97e-34;1!CL:0002625;5.97e-34;1!CL:0000216;5.97e-34;1!CL:0002616;5.97e-34;1!CL:0000154;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,7.06e-34,1;CL:0000511,9.85e-34,1;CL:0002625,9.85e-34,1;CL:0000216,9.85e-34,1;CL:0000154,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.73e-21!115;UBERON:0003296!1.58e-07!4;UBERON:0010133!1.58e-07!4;UBERON:0000007!3.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.86e-48;11!UBERON:0000473;8.61e-38;8!UBERON:0001136;5.97e-34;1!UBERON:0001301;5.97e-34;1!UBERON:0001343;5.97e-34;1!UBERON:0004910;5.97e-34;1!UBERON:0004813;5.97e-34;1!UBERON:0005904;1.17e-33;4!UBERON:0003101;1.51e-24;22!UBERON:0000079;1.51e-24;22!UBERON:0004909;9.86e-18;2!UBERON:0005406;9.86e-18;2!UBERON:0000991;5.80e-15;21!UBERON:0000058;3.71e-14;10!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0003133;4.47e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.86e-48,11;UBERON:0000473,1.04e-37,8;UBERON:0001301,3.61e-34,1;UBERON:0001136,9.85e-34,1;UBERON:0001343,9.85e-34,1;UBERON:0004910,9.85e-34,1;UBERON:0005154,9.85e-34,1;UBERON:0005295,9.85e-34,1;UBERON:0004813,9.85e-34,1;UBERON:0005297,9.85e-34,1;UBERON:0005294,9.85e-34,1;UBERON:0010141,9.85e-34,1;UBERON:0005891,9.85e-34,1;UBERON:0005904,1.17e-33,4;UBERON:0003101,1.51e-24,22;UBERON:0000079,1.51e-24,22;UBERON:0005406,1.07e-17,2;UBERON:0004909,1.27e-17,2;UBERON:0000991,6.23e-15,21;UBERON:0009196,6.23e-15,21;UBERON:0009117,6.23e-15,21;UBERON:0005564,6.23e-15,21;UBERON:0004176,2.73e-14,22;UBERON:0004876,5.76e-13,11;UBERON:0006947,2.31e-12,3;UBERON:0004054,2.31e-12,3;UBERON:0003133,1.32e-11,48;UBERON:0003886,2.23e-10,54;UBERON:0005156,1.52e-09,59;UBERON:0000990,1.52e-09,59;UBERON:0002553,3.00e-09,61;UBERON:0000058,6.36e-08,19;UBERON:0002323,3.26e-07,46;UBERON:0004458,8.23e-07,49 | |||
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| ||
|short_description=p54@TSC22D1 | |||
}} | }} |
Latest revision as of 11:27, 17 September 2015
Short description: | p54@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_54_at_TSC22D1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -34bp_to_NM_001243798_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 7.06e-34 | 1 |
androgen binding protein secreting cell | 9.85e-34 | 1 |
seminiferous tubule epithelial cell | 9.85e-34 | 1 |
Sertoli cell | 9.85e-34 | 1 |
protein secreting cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.86e-48 | 11 |
testis | 1.04e-37 | 8 |
epididymis | 3.61e-34 | 1 |
mesothelium | 9.85e-34 | 1 |
seminiferous tubule of testis | 9.85e-34 | 1 |
epithelium of male gonad | 9.85e-34 | 1 |
epithelial cord | 9.85e-34 | 1 |
sex cord | 9.85e-34 | 1 |
seminiferous tubule epithelium | 9.85e-34 | 1 |
testis sex cord | 9.85e-34 | 1 |
genital ridge | 9.85e-34 | 1 |
primitive sex cord of indifferent gonad | 9.85e-34 | 1 |
coelomic epithelium | 9.85e-34 | 1 |
duct of male reproductive system | 1.17e-33 | 4 |
male organism | 1.51e-24 | 22 |
male reproductive system | 1.51e-24 | 22 |
perirenal fat | 1.07e-17 | 2 |
epithelium of gonad | 1.27e-17 | 2 |
gonad | 6.23e-15 | 21 |
indifferent external genitalia | 6.23e-15 | 21 |
indifferent gonad | 6.23e-15 | 21 |
gonad primordium | 6.23e-15 | 21 |
external genitalia | 2.73e-14 | 22 |
urogenital ridge | 5.76e-13 | 11 |
male genital duct | 2.31e-12 | 3 |
internal male genitalia | 2.31e-12 | 3 |
reproductive organ | 1.32e-11 | 48 |
body cavity precursor | 2.23e-10 | 54 |
reproductive structure | 1.52e-09 | 59 |
reproductive system | 1.52e-09 | 59 |
anatomical cavity | 3.00e-09 | 61 |
duct | 6.36e-08 | 19 |
body cavity | 3.26e-07 | 46 |
body cavity or lining | 8.23e-07 | 49 |