FFCP PHASE1:Hg19::chr20:61299155..61299169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28231 | |EntrezGene=28231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10953 | |HGNC=10953 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000451793_5end | |association_with_transcript=0bp_to_ENST00000451793_5end | ||
|cluster_id=chr20:61299155..61299169,+ | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_10_at_SLCO4A1_5end | |description=CAGE_peak_10_at_SLCO4A1_5end | ||
|id=chr20:61299155..61299169,+ | |id=chr20:61299155..61299169,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.29e-23!10;CL:0000541!1.29e-23!10;CL:0000147!1.37e-16!14;CL:0002567!5.91e-16!3;CL:0000710!2.60e-11!20;CL:0000075!4.04e-08!27;CL:0002178!1.39e-07!3 | |ontology_enrichment_celltype=CL:0000148!1.29e-23!10;CL:0000541!1.29e-23!10;CL:0000147!1.37e-16!14;CL:0002567!5.91e-16!3;CL:0000710!2.60e-11!20;CL:0000075!4.04e-08!27;CL:0002178!1.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.20e-100;10!CL:0002567;1.11e-84;3!CL:0000147;4.33e-72;14!CL:0000710;1.20e-50;20!CL:0000075;1.17e-37;27!CL:0002566;1.54e-29;1!CL:0002077;4.94e-28;34!CL:0002178;6.73e-11;3!CL:0000149;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.20e-100,10;CL:0000541,1.20e-100,10;CL:0002567,1.71e-84,3;CL:0000147,4.33e-72,14;CL:0000710,1.20e-50,20;CL:0000075,1.17e-37,27;CL:0002077,5.25e-30,34;CL:0002566,1.33e-29,1;CL:0000333,8.13e-24,41;CL:0000133,6.77e-17,59;CL:0000221,5.58e-14,72;CL:0002178,6.73e-11,3;CL:0000149,2.43e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;4.01e-10;59!CL:0000221;4.81e-08;72 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.15e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.15e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001041!3.93e-10!98;UBERON:0000077!9.38e-09!130;UBERON:0001007!1.83e-08!155;UBERON:0001555!1.83e-08!155;UBERON:0007026!1.83e-08!155;UBERON:0001044!8.83e-08!6;UBERON:0003293!8.83e-08!6;UBERON:0003294!8.83e-08!6;UBERON:0010047!8.83e-08!6;UBERON:0000167!8.83e-08!6;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0004119!2.13e-07!169;UBERON:0000925!2.13e-07!169;UBERON:0006595!2.13e-07!169 | |ontology_enrichment_uberon=UBERON:0001041!3.93e-10!98;UBERON:0000077!9.38e-09!130;UBERON:0001007!1.83e-08!155;UBERON:0001555!1.83e-08!155;UBERON:0007026!1.83e-08!155;UBERON:0001044!8.83e-08!6;UBERON:0003293!8.83e-08!6;UBERON:0003294!8.83e-08!6;UBERON:0010047!8.83e-08!6;UBERON:0000167!8.83e-08!6;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0004119!2.13e-07!169;UBERON:0000925!2.13e-07!169;UBERON:0006595!2.13e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p10@SLCO4A1 | |short_description=p10@SLCO4A1 | ||
}} | }} |
Latest revision as of 11:21, 17 September 2015
Short description: | p10@SLCO4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLCO4A1_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000451793_5end |
EntrezGene: | SLCO4A1 |
HGNC: | 10953 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.20e-100 | 10 |
melanoblast | 1.20e-100 | 10 |
light melanocyte | 1.71e-84 | 3 |
pigment cell | 4.33e-72 | 14 |
neurecto-epithelial cell | 1.20e-50 | 20 |
columnar/cuboidal epithelial cell | 1.17e-37 | 27 |
ecto-epithelial cell | 5.25e-30 | 34 |
dark melanocyte | 1.33e-29 | 1 |
migratory neural crest cell | 8.13e-24 | 41 |
neurectodermal cell | 6.77e-17 | 59 |
ectodermal cell | 5.58e-14 | 72 |
epithelial cell of stomach | 6.73e-11 | 3 |
visual pigment cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.15e-15 | 2 |