FFCP PHASE1:Hg19::chr10:17496614..17496625,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:17496614..17496625,-
|short_description=p5@ST8SIA6
|description=CAGE_peak_5_at_ST8SIA6_5end
|association_with_transcript=-228bp_to_ENST00000377610_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338596 | |EntrezGene=338596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23317 | |HGNC=23317 | ||
|TSSclassifier=strong | |||
|UniProt=B0YJ96 | |UniProt=B0YJ96 | ||
|association_with_transcript=-228bp_to_ENST00000377610_5end | |||
|cluster_id=chr10:17496614..17496625,- | |||
|coexpression_cluster_id=C3002 | |||
|description=CAGE_peak_5_at_ST8SIA6_5end | |||
|id=chr10:17496614..17496625,- | |||
|ontology_enrichment_celltype=CL:0000988!3.76e-08!182;CL:0000037!1.87e-07!172;CL:0000566!1.87e-07!172;CL:0002032!9.74e-07!165;CL:0000837!9.74e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.56e-21;5!CL:0000148;1.03e-14;10!CL:0000163;1.29e-11;9!CL:0000147;1.86e-10;14!CL:0000037;2.82e-07;1!CL:0001024;2.82e-07;1!CL:0002566;2.82e-07;1!CL:0000710;2.96e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.99e-21,5;CL:0002028,9.99e-21,5;CL:0000148,1.27e-14,10;CL:0000541,1.27e-14,10;CL:0000163,1.40e-11,9;CL:0000147,2.15e-10,14;CL:0000988,1.20e-09,177;CL:0000763,3.55e-08,108;CL:0000049,3.55e-08,108;CL:0002566,2.66e-07,1;CL:0000710,3.26e-07,20;CL:0001024,3.62e-07,1;CL:0000037,6.32e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.47e-14!31;DOID:1240!1.37e-12!39;DOID:2531!2.73e-09!51;DOID:0060083!2.73e-09!51;DOID:1036!5.55e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.57e-14;31!DOID:1240;3.50e-11;39!DOID:2531;3.79e-10;51!DOID:0060083;3.79e-10;51!DOID:0060060;1.14e-07;1!DOID:0060061;1.14e-07;1!DOID:8691;1.14e-07;1!DOID:8552;1.14e-07;1!DOID:3371;2.82e-07;1!DOID:4549;2.82e-07;1!DOID:5861;2.82e-07;1!DOID:6496;2.82e-07;1!DOID:9119;2.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.28e-14,31;DOID:1240,9.32e-14,39;DOID:2531,2.34e-12,51;DOID:0060083,2.34e-12,51;DOID:0060060,1.18e-07,1;DOID:0060061,1.18e-07,1;DOID:8691,1.18e-07,1;DOID:8552,1.25e-07,1;DOID:3371,1.61e-07,1;DOID:4549,1.61e-07,1;DOID:5861,1.61e-07,1;DOID:6496,1.61e-07,1;DOID:9119,2.50e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-15!115;UBERON:0002616!4.43e-07!59;UBERON:0000178!7.97e-07!15;UBERON:0000179!7.97e-07!15;UBERON:0000463!7.97e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.82e-07;1!UBERON:0006518;2.82e-07;1!UBERON:0008949;2.82e-07;1!UBERON:0000101;2.82e-07;1!UBERON:0002167;2.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.83e-07,1;UBERON:0006518,2.83e-07,1;UBERON:0008949,2.83e-07,1;UBERON:0000101,2.83e-07,1;UBERON:0002167,2.83e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,1.17440175733939,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.24203425192614,2.10707267820062,0,0,0,0.167186495390678,0,0,0,0,0.883817722424512,0.886135578334485,1.62482318259009,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0.649094787309367,0.870648686496336,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0,0,0,5.28290604079356,2.48793738648926,2.01767934783746,3.02981840223312,1.26995788584338,1.14596527667483,0,0,1.23392991243988,1.50171528921959,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,1.1490322207942,2.11673582723883,0,3.08876895924805,0,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0,0,0,0.166849141711909,0,0.556812347790485,1.23087398947712,0.811367035427949,1.33228787199128,1.4098700508785,0,0.146508179271894,0,1.33732061132974,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.349839999984783,1.44999915086959,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16075186470203,0.676786981851542,0.784250137270958,0.503464760927528,1.13852239634511,1.74830236878417,0,0,0,0,0,0,1.22206028986725,2.37216902944498,2.96553453471607,3.55034628318548,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,1.76512253383001,0,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0.717873024576814,0.199679000498991,0,0,0.873385142327441,0,0,0,0,0,0,0,0,0.408610218334727,0.321506296930038,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.533937062838473,0.471612915298998,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0.332787154610557,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,2.19986135440423,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0,0,0.322951291263702,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.380494861163441,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.20686599172379,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | 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| ||
|short_description=p5@ST8SIA6 | |||
}} | }} |
Latest revision as of 11:19, 17 September 2015
Short description: | p5@ST8SIA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ST8SIA6_5end |
Coexpression cluster: | C3002_Mast_CD34_acute_CD4_Melanocyte_chronic_CD133 |
Association with transcript: | -228bp_to_ENST00000377610_5end |
EntrezGene: | ST8SIA6 |
HGNC: | 23317 |
UniProt: | B0YJ96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.99e-21 | 5 |
basophil mast progenitor cell | 9.99e-21 | 5 |
melanocyte | 1.27e-14 | 10 |
melanoblast | 1.27e-14 | 10 |
endocrine cell | 1.40e-11 | 9 |
pigment cell | 2.15e-10 | 14 |
hematopoietic cell | 1.20e-09 | 177 |
myeloid cell | 3.55e-08 | 108 |
common myeloid progenitor | 3.55e-08 | 108 |
dark melanocyte | 2.66e-07 | 1 |
neurecto-epithelial cell | 3.26e-07 | 20 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.62e-07 | 1 |
hematopoietic stem cell | 6.32e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.83e-07 | 1 |
right lung lobe | 2.83e-07 | 1 |
lower lobe of lung | 2.83e-07 | 1 |
lobe of lung | 2.83e-07 | 1 |
right lung | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.28e-14 | 31 |
leukemia | 9.32e-14 | 39 |
hematologic cancer | 2.34e-12 | 51 |
immune system cancer | 2.34e-12 | 51 |
non-Hodgkin lymphoma | 1.18e-07 | 1 |
cutaneous T cell lymphoma | 1.18e-07 | 1 |
mycosis fungoides | 1.18e-07 | 1 |
chronic myeloid leukemia | 1.25e-07 | 1 |
chondrosarcoma | 1.61e-07 | 1 |
extraosseous chondrosarcoma | 1.61e-07 | 1 |
myxoid chondrosarcoma | 1.61e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.61e-07 | 1 |
acute myeloid leukemia | 2.50e-07 | 1 |