FFCP PHASE1:Hg19::chr10:17496582..17496601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338596 | |EntrezGene=338596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23317 | |HGNC=23317 | ||
|TSSclassifier=strong | |||
|UniProt=B0YJ96 | |UniProt=B0YJ96 | ||
|association_with_transcript=-196bp_to_ENST00000377610_5end | |association_with_transcript=-196bp_to_ENST00000377610_5end | ||
|cluster_id=chr10:17496582..17496601,- | |||
|coexpression_cluster_id=C3002 | |coexpression_cluster_id=C3002 | ||
|description=CAGE_peak_1_at_ST8SIA6_5end | |description=CAGE_peak_1_at_ST8SIA6_5end | ||
|id=chr10:17496582..17496601,- | |id=chr10:17496582..17496601,- | ||
|ontology_enrichment_celltype=CL:0000791!2.00e-09!18;CL:0000789!2.00e-09!18;CL:0002420!2.00e-09!18;CL:0002419!2.00e-09!18;CL:0000790!2.00e-09!18;CL:0000084!1.00e-08!25;CL:0000827!1.00e-08!25;CL:0000625!1.83e-07!11;CL:0000148!8.79e-07!10;CL:0000541!8.79e-07!10 | |ontology_enrichment_celltype=CL:0000791!2.00e-09!18;CL:0000789!2.00e-09!18;CL:0002420!2.00e-09!18;CL:0002419!2.00e-09!18;CL:0000790!2.00e-09!18;CL:0000084!1.00e-08!25;CL:0000827!1.00e-08!25;CL:0000625!1.83e-07!11;CL:0000148!8.79e-07!10;CL:0000541!8.79e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.66e-11;18!CL:0000789;9.66e-11;18!CL:0002419;9.66e-11;18!CL:0000084;5.62e-10;25!CL:0000625;1.19e-09;11!CL:0000097;2.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.76e-11,18;CL:0000789,5.76e-11,18;CL:0002420,5.76e-11,18;CL:0002419,5.76e-11,18;CL:0000790,5.76e-11,18;CL:0000084,2.94e-10,25;CL:0000827,2.94e-10,25;CL:0000625,4.82e-10,11;CL:0000988,1.09e-09,177;CL:0000037,2.62e-09,168;CL:0002032,1.80e-08,161;CL:0000837,1.80e-08,161;CL:0000097,2.25e-07,5;CL:0002028,2.25e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;9.66e-11;18 | |||
|ontology_enrichment_disease=DOID:8692!5.38e-09!31;DOID:1240!7.38e-08!39 | |ontology_enrichment_disease=DOID:8692!5.38e-09!31;DOID:1240!7.38e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.46e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.41e-10,31;DOID:1240,3.06e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.13e-30!115;UBERON:0001049!1.54e-13!57;UBERON:0005068!1.54e-13!57;UBERON:0006241!1.54e-13!57;UBERON:0007135!1.54e-13!57;UBERON:0002616!9.86e-12!59;UBERON:0005743!4.27e-11!86;UBERON:0003075!4.99e-11!86;UBERON:0007284!4.99e-11!86;UBERON:0001017!9.54e-11!82;UBERON:0000955!4.88e-10!69;UBERON:0006238!4.88e-10!69;UBERON:0002346!1.20e-09!90;UBERON:0000073!1.36e-09!94;UBERON:0001016!1.36e-09!94;UBERON:0003080!1.52e-08!42;UBERON:0002780!2.32e-08!41;UBERON:0001890!2.32e-08!41;UBERON:0006240!2.32e-08!41;UBERON:0002619!4.34e-07!22;UBERON:0002020!7.29e-07!34;UBERON:0003528!7.29e-07!34;UBERON:0001893!7.37e-07!34;UBERON:0000178!8.39e-07!15;UBERON:0000179!8.39e-07!15;UBERON:0000463!8.39e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!7.13e-30!115;UBERON:0001049!1.54e-13!57;UBERON:0005068!1.54e-13!57;UBERON:0006241!1.54e-13!57;UBERON:0007135!1.54e-13!57;UBERON:0002616!9.86e-12!59;UBERON:0005743!4.27e-11!86;UBERON:0003075!4.99e-11!86;UBERON:0007284!4.99e-11!86;UBERON:0001017!9.54e-11!82;UBERON:0000955!4.88e-10!69;UBERON:0006238!4.88e-10!69;UBERON:0002346!1.20e-09!90;UBERON:0000073!1.36e-09!94;UBERON:0001016!1.36e-09!94;UBERON:0003080!1.52e-08!42;UBERON:0002780!2.32e-08!41;UBERON:0001890!2.32e-08!41;UBERON:0006240!2.32e-08!41;UBERON:0002619!4.34e-07!22;UBERON:0002020!7.29e-07!34;UBERON:0003528!7.29e-07!34;UBERON:0001893!7.37e-07!34;UBERON:0000178!8.39e-07!15;UBERON:0000179!8.39e-07!15;UBERON:0000463!8.39e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.81e-09;53!UBERON:0002616;7.81e-09;53!UBERON:0000178;2.00e-08;15!UBERON:0000179;2.00e-08;15!UBERON:0000463;2.00e-08;15!UBERON:0004733;7.47e-08;12!UBERON:0002028;7.47e-08;12!UBERON:0007023;3.75e-07;114!UBERON:0004732;4.97e-07;13!UBERON:0002780;5.47e-07;41!UBERON:0001890;5.47e-07;41!UBERON:0002619;6.37e-07;22!UBERON:0001950;7.35e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.11e-24,114;UBERON:0001049,2.64e-15,56;UBERON:0005068,2.64e-15,56;UBERON:0006241,2.64e-15,56;UBERON:0007135,2.64e-15,56;UBERON:0000073,9.69e-15,53;UBERON:0002616,9.69e-15,53;UBERON:0003075,3.19e-11,82;UBERON:0007284,3.19e-11,82;UBERON:0002346,4.00e-10,86;UBERON:0000955,1.87e-09,68;UBERON:0006238,1.87e-09,68;UBERON:0001017,2.51e-09,81;UBERON:0002780,4.55e-09,41;UBERON:0001890,4.55e-09,41;UBERON:0003080,4.55e-09,41;UBERON:0006240,4.55e-09,41;UBERON:0000178,2.53e-08,15;UBERON:0000179,2.53e-08,15;UBERON:0000463,2.53e-08,15;UBERON:0003076,3.22e-08,15;UBERON:0003057,3.22e-08,15;UBERON:0004733,6.53e-08,12;UBERON:0002028,6.53e-08,12;UBERON:0007277,6.53e-08,12;UBERON:0003528,1.85e-07,34;UBERON:0002020,1.85e-07,34;UBERON:0001893,1.88e-07,34;UBERON:0001016,2.48e-07,89;UBERON:0004732,4.40e-07,13;UBERON:0010371,6.03e-07,104;UBERON:0002619,8.38e-07,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67860020691794,2.24400760368678,3.76145665773705,0,0,0,0,0,0,1.96682138424452,3.45446458287491,1.54816123316076,0,0,0.369754010166788,0,0,22.0200329501135,2.21598163412751,4.01088894940283,2.38711957787437,0.223915474239924,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0.256160706529101,0,1.03423704220986,1.29096936716765,1.35426486594342,0,0,0.224723484445085,0,1.60464513538047,1.27867425159808,0,0.398927315243264,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.425208599930087,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.5468181458201,15.694239763483,14.7495087474043,1.57367816091066,3.14408610199332,1.02800749499755,5.01559486172034,0.651844533267181,1.89379122293893,0,2.67385096524417,17.3817485410154,17.2796437775224,24.6431516026164,4.86747014957566,4.81219585971549,1.47994114143309,3.31620021343018,4.05724320029073,0.741432815810302,0,0,2.37949619664889,1.53288197440768,3.09264700934367,1.26509846009751,1.91139248594458,3.90650072313851,3.8018081777935,1.80690142893327,2.55973222308837,8.74515085866421,2.8413270245282,4.92676798152628,4.03213486449465,5.34880391567015,3.62061009706997,0,0.670700859703636,0.383587685530591,0,0,0,0,0,1.03988298880475,0,1.14185221401064,3.6019245761871,0.728590576585084,0,5.51730569212962,5.57215159357655,2.12732736830184,0,0,0,0.39752481473341,1.72046919021225,0,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0,0.367663080345869,0,0.17859945656816,0.673588117878509,0,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.558350568994769,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.609868530647977,1.06023814657188,0.813357600086629,0.829288440122964,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,1.77236972004421,0,0,0.514703430895577,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.463721619900307,0.587043471179108,0.144366447761074,0.462985512576611,0,6.3216351836742,2.57545848628462,0,0,0,0,0,0.141775097242386,0,0,0,15.2725603747742,58.9044023548482,29.8552486378712,23.2033125001308,32.6967902574324,10.0326672981627,16.0435138734477,16.4104426094066,5.13217338068116,8.12337192356256,23.7271015696695,16.8637595252041,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,6.69904584686553,7.97822026980214,9.11235557586213,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,1.03384013061444,1.50999940573032,2.881644060693,0,0,0,0.248107807818777,0,0,0,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0,0.902399225814824,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,8.55113518919145,10.7188534920209,0.256450125116389,0.656029291399411,0,2.88514832613622,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,0,2.16530741786592,0,0,0,0,1.52234282769651,2.29391162142713,2.84823593587081,3.57347663186684,1.23408681925858,2.59389324477087,2.16012574895246,0.79312517629427,0,0,0,0,0,0,1.91311527274587,0,6.3196772143681,24.5541355959704,0,32.8532698392747,0,0,7.51903431270201,3.04725200042886,0.1605880751037,0.605399121573143,5.53600108997424,0.343505344755765,0.307240764308458,0.447352215784832,0.166849141711909,0,9.74421608633348,4.92349595790849,7.84321467580351,18.9851021758757,26.7875309666914,0,0.879049075631364,0,6.46371628809375,0,0,0,0,0.994147647766298,2.67271891179974,0.111308705022906,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0.269605053441981,0.179021174675609,6.13886844272246,0.690503839458535,0,0,0.969332746095218,1.20598527610407,0,3.64598865519327,3.49839999984783,0.724999575434793,1.4793148277115,0,0.236387681767936,0,0,0.694499979733169,0,1.92954301800653,1.52581736317083,1.76926815889959,0,1.97446857438575,0,0,0.923403102045565,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,16.1225331443152,4.28631755172643,6.07793856384993,7.04850665298539,5.31310451627718,20.6617552674492,0,0,0,0,0,1.59223616106011,12.2206028986725,10.971281761183,12.9742135893828,14.5146509812583,2.69604531922708,1.60515529459758,3.74823113160543,0,1.76098157038881,1.94224303627274,0.394584402849391,1.20990716048664,1.83643656978294,3.72800819808079,0.300646838828985,0,0,0,0,0,0,0,0,0,0.0870592065804026,4.54289337429278,0,0,0,0,1.06687918137261,18.9750672386726,3.61569185248852,0.274083849293502,0,2.279188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| ||
|short_description=p1@ST8SIA6 | |short_description=p1@ST8SIA6 | ||
}} | }} |
Latest revision as of 11:19, 17 September 2015
Short description: | p1@ST8SIA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ST8SIA6_5end |
Coexpression cluster: | C3002_Mast_CD34_acute_CD4_Melanocyte_chronic_CD133 |
Association with transcript: | -196bp_to_ENST00000377610_5end |
EntrezGene: | ST8SIA6 |
HGNC: | 23317 |
UniProt: | B0YJ96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.76e-11 | 18 |
alpha-beta T cell | 5.76e-11 | 18 |
immature T cell | 5.76e-11 | 18 |
mature T cell | 5.76e-11 | 18 |
immature alpha-beta T cell | 5.76e-11 | 18 |
T cell | 2.94e-10 | 25 |
pro-T cell | 2.94e-10 | 25 |
CD8-positive, alpha-beta T cell | 4.82e-10 | 11 |
hematopoietic cell | 1.09e-09 | 177 |
hematopoietic stem cell | 2.62e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.80e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-08 | 161 |
mast cell | 2.25e-07 | 5 |
basophil mast progenitor cell | 2.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.11e-24 | 114 |
neural tube | 2.64e-15 | 56 |
neural rod | 2.64e-15 | 56 |
future spinal cord | 2.64e-15 | 56 |
neural keel | 2.64e-15 | 56 |
regional part of nervous system | 9.69e-15 | 53 |
regional part of brain | 9.69e-15 | 53 |
neural plate | 3.19e-11 | 82 |
presumptive neural plate | 3.19e-11 | 82 |
neurectoderm | 4.00e-10 | 86 |
brain | 1.87e-09 | 68 |
future brain | 1.87e-09 | 68 |
central nervous system | 2.51e-09 | 81 |
regional part of forebrain | 4.55e-09 | 41 |
forebrain | 4.55e-09 | 41 |
anterior neural tube | 4.55e-09 | 41 |
future forebrain | 4.55e-09 | 41 |
blood | 2.53e-08 | 15 |
haemolymphatic fluid | 2.53e-08 | 15 |
organism substance | 2.53e-08 | 15 |
posterior neural tube | 3.22e-08 | 15 |
chordal neural plate | 3.22e-08 | 15 |
segmental subdivision of hindbrain | 6.53e-08 | 12 |
hindbrain | 6.53e-08 | 12 |
presumptive hindbrain | 6.53e-08 | 12 |
brain grey matter | 1.85e-07 | 34 |
gray matter | 1.85e-07 | 34 |
telencephalon | 1.88e-07 | 34 |
nervous system | 2.48e-07 | 89 |
segmental subdivision of nervous system | 4.40e-07 | 13 |
ecto-epithelium | 6.03e-07 | 104 |
regional part of cerebral cortex | 8.38e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.41e-10 | 31 |
leukemia | 3.06e-08 | 39 |