FFCP PHASE1:Hg19::chr12:133235463..133235468,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5426 | |EntrezGene=5426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9177 | |HGNC=9177 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHF9,Q96IE1 | |UniProt=E9PHF9,Q96IE1 | ||
|association_with_transcript=16bp_to_ENST00000320557,uc001ukr.1_5end | |association_with_transcript=16bp_to_ENST00000320557,uc001ukr.1_5end | ||
|cluster_id=chr12:133235463..133235468,- | |||
|description=CAGE_peak_3_at_POLE_5end | |description=CAGE_peak_3_at_POLE_5end | ||
|id=chr12:133235463..133235468,- | |id=chr12:133235463..133235468,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;7.77e-07;1!CL:0002127;7.77e-07;1!CL:0000785;7.77e-07;1!CL:0000911;7.77e-07;1!CL:0000557;7.77e-07;1!CL:0000819;7.77e-07;1!CL:0000814;7.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,6.76e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.08e-17;3 | |||
|ontology_enrichment_disease=DOID:162!3.54e-14!235;DOID:14566!4.78e-13!239;DOID:2531!2.44e-10!51;DOID:0060083!2.44e-10!51;DOID:0050686!8.13e-09!137;DOID:0050687!2.39e-08!143 | |ontology_enrichment_disease=DOID:162!3.54e-14!235;DOID:14566!4.78e-13!239;DOID:2531!2.44e-10!51;DOID:0060083!2.44e-10!51;DOID:0050686!8.13e-09!137;DOID:0050687!2.39e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.77e-07;1!DOID:8675;7.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.76e-07,1;DOID:8675,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!9.61e-09!22;UBERON:0000956!2.49e-08!25;UBERON:0000203!2.49e-08!25;UBERON:0001869!9.65e-08!32;UBERON:0002020!1.08e-07!34;UBERON:0003528!1.08e-07!34;UBERON:0001049!1.17e-07!57;UBERON:0005068!1.17e-07!57;UBERON:0006241!1.17e-07!57;UBERON:0007135!1.17e-07!57;UBERON:0001950!1.29e-07!20;UBERON:0001893!3.05e-07!34;UBERON:0002791!3.63e-07!33;UBERON:0007023!9.97e-07!115 | |ontology_enrichment_uberon=UBERON:0002619!9.61e-09!22;UBERON:0000956!2.49e-08!25;UBERON:0000203!2.49e-08!25;UBERON:0001869!9.65e-08!32;UBERON:0002020!1.08e-07!34;UBERON:0003528!1.08e-07!34;UBERON:0001049!1.17e-07!57;UBERON:0005068!1.17e-07!57;UBERON:0006241!1.17e-07!57;UBERON:0007135!1.17e-07!57;UBERON:0001950!1.29e-07!20;UBERON:0001893!3.05e-07!34;UBERON:0002791!3.63e-07!33;UBERON:0007023!9.97e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.37e-11;22!UBERON:0002021;2.89e-11;5!UBERON:0000956;6.17e-10;25!UBERON:0000203;6.17e-10;25!UBERON:0001950;2.93e-09;20!UBERON:0002037;4.26e-09;6!UBERON:0002426;3.07e-07;1!UBERON:0003831;3.07e-07;1!UBERON:0003898;3.07e-07;1!UBERON:0004830;3.07e-07;1!UBERON:0003830;3.07e-07;1!UBERON:0005175;3.07e-07;1!UBERON:0001774;3.07e-07;1!UBERON:0001103;3.07e-07;1!UBERON:0005795;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.84e-11,22;UBERON:0002021,2.80e-11,5;UBERON:0001049,4.42e-10,56;UBERON:0005068,4.42e-10,56;UBERON:0006241,4.42e-10,56;UBERON:0007135,4.42e-10,56;UBERON:0000956,4.93e-10,25;UBERON:0000203,4.93e-10,25;UBERON:0001950,2.23e-09,20;UBERON:0002037,2.82e-09,6;UBERON:0006215,2.82e-09,6;UBERON:0001016,3.21e-09,89;UBERON:0001017,5.19e-09,81;UBERON:0000073,6.92e-09,53;UBERON:0002616,6.92e-09,53;UBERON:0000955,6.97e-08,68;UBERON:0006238,6.97e-08,68;UBERON:0002791,1.04e-07,32;UBERON:0001869,1.04e-07,32;UBERON:0003528,3.24e-07,34;UBERON:0002020,3.24e-07,34;UBERON:0001893,3.24e-07,34;UBERON:0002426,3.36e-07,1;UBERON:0003831,3.36e-07,1;UBERON:0003898,3.36e-07,1;UBERON:0004830,3.36e-07,1;UBERON:0003830,3.36e-07,1;UBERON:0005175,3.36e-07,1;UBERON:0001774,3.36e-07,1;UBERON:0001103,3.36e-07,1;UBERON:0010084,3.36e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.472264687882075,0,0,0,0.919421224478927,0.30120591877825,0,1.23947520928483,0.284338464974843,0,0,0,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.664601683750863,0,0.128091319725675,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0.651083453856419,0,0,0,0,0,0,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0,0,0,0,0,0.337552664482532,0,0.504867548488229,0,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0,0.882926198829301,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.380987365753014,0,0,0,0.514137463516618,0,0.285826432630578,0.672786506072164,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,1.00876629594175,0,0,0.128343036279748,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0.182091168006717,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0.522870902049801,0,0,0,0.103041011647722,0.366277859273374,1.32015199872941,0,0,0,0,0,0.307007349452259,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0,0,0.192444225451024,0,0,0,0,1.68471475667626,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.213648142254946,0.962479855263359,0.735120647943095,0.557409525377156,0,0.853702120180969,0.637705090915289,1.1974762285969,0.191505370132367,3.38677732358213,0.324621940274555,0.842391534340376,0.912938716132769,0.156679895773023,0,0.338583555603207,0.481764225311099,0.605399121573143,0.425846237690326,0,0,0.223676107892416,0,0.390776190804081,0,0,0.270455678475983,0.33307196799782,0,0,0,0.485442086998054,0,0.852408440419239,0,0,0.307160702099232,0,0.422008249231538,0,0.16480387422676,2.95575571379191,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0,0.0927680981618513,1.99613798001194,0,0.262379999988587,0,0.227586896570999,0.254253650292766,0.945550727071745,1.37897349296586,0.583209226766509,0.868124974666461,0,0.120596438625408,1.52581736317083,5.30780447669878,1.77328571372128,0,0,0.139423744278603,0.384751292518985,0.113942055847001,0.23056390438806,0.718061155278177,0.108647371922008,0,0,0,0,0.31396051279005,0,0.451191321234361,0.784250137270958,0.167821586975843,0.948768663620925,0.158936578980379,0,0.163232808159148,0.424059214301822,0.216388639742091,0.995261931078505,0.265372693510018,0,0,0.370691816839509,0.313265848516366,0.067401132980677,2.40773294189637,0,1.45963831372533,0.19566461893209,0,0.394584402849391,0,0.91821828489147,0,0,0.311064574191741,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0.19351266257817,0.219267951258557,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0.548167698587004,0,0.189932387867636,0,0,0.213452994739353,0.39961921916426,0,0.343609788497747,0.343189995723929,0.432164393964449,0,0,0,0.313808538937,0.305994652908965,0.866851769704557,0,0.136905378891993,1.27746588066972,0,0.525774708558629,0.279282401272254,0.687481272035051,0,0,0,0,0.134366944973453,0.360299883542404,0,0.157566364614447,0,0.26961417541674,0.0984274815147488,0.338693328263138,2.38568906942791,0.408610218334727,0.643012593860077,0,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.0524545881349981,0.211200673038813,0,0.575745591958336,0.714695326373367,0.662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| ||
|short_description=p3@POLE | |short_description=p3@POLE | ||
}} | }} |
Latest revision as of 11:09, 17 September 2015
Short description: | p3@POLE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POLE_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000320557, uc001ukr.1_5end |
EntrezGene: | POLE |
HGNC: | 9177 |
UniProt: | E9PHF9Q96IE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 6.76e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.84e-11 | 22 |
occipital lobe | 2.80e-11 | 5 |
neural tube | 4.42e-10 | 56 |
neural rod | 4.42e-10 | 56 |
future spinal cord | 4.42e-10 | 56 |
neural keel | 4.42e-10 | 56 |
cerebral cortex | 4.93e-10 | 25 |
pallium | 4.93e-10 | 25 |
neocortex | 2.23e-09 | 20 |
cerebellum | 2.82e-09 | 6 |
rhombic lip | 2.82e-09 | 6 |
nervous system | 3.21e-09 | 89 |
central nervous system | 5.19e-09 | 81 |
regional part of nervous system | 6.92e-09 | 53 |
regional part of brain | 6.92e-09 | 53 |
brain | 6.97e-08 | 68 |
future brain | 6.97e-08 | 68 |
regional part of telencephalon | 1.04e-07 | 32 |
cerebral hemisphere | 1.04e-07 | 32 |
brain grey matter | 3.24e-07 | 34 |
gray matter | 3.24e-07 | 34 |
telencephalon | 3.24e-07 | 34 |
chest muscle | 3.36e-07 | 1 |
respiratory system muscle | 3.36e-07 | 1 |
skeletal muscle of trunk | 3.36e-07 | 1 |
respiratory system skeletal muscle | 3.36e-07 | 1 |
thoracic segment muscle | 3.36e-07 | 1 |
chest organ | 3.36e-07 | 1 |
muscle of trunk | 3.36e-07 | 1 |
diaphragm | 3.36e-07 | 1 |
future diaphragm | 3.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.76e-07 | 1 |
lymphosarcoma | 6.76e-07 | 1 |