FFCP PHASE1:Hg19::chr1:29213584..29213666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2035 | |EntrezGene=2035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3377 | |HGNC=3377 | ||
|TSSclassifier=strong | |||
|UniProt=P11171,E9PEX0,E9PEW9,C9JTS2,Q1WWM3,Q59F12,Q29RX4 | |UniProt=P11171,E9PEX0,E9PEW9,C9JTS2,Q1WWM3,Q59F12,Q29RX4 | ||
|association_with_transcript=0bp_to_ENST00000343067,ENST00000349460,ENST00000356093,ENST00000358989,ENST00000373800,ENST00000398861,ENST00000398863,ENST00000398865,ENST00000482464,NM_001166005,NM_001166007,NM_004437,NM_203342,NM_203343,uc001brg.1,uc001brh.1,uc001bri.1,uc001brj.1_5end | |association_with_transcript=0bp_to_ENST00000343067,ENST00000349460,ENST00000356093,ENST00000358989,ENST00000373800,ENST00000398861,ENST00000398863,ENST00000398865,ENST00000482464,NM_001166005,NM_001166007,NM_004437,NM_203342,NM_203343,uc001brg.1,uc001brh.1,uc001bri.1,uc001brj.1_5end | ||
|cluster_id=chr1:29213584..29213666,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_1_at_EPB41_5end | |description=CAGE_peak_1_at_EPB41_5end | ||
|id=chr1:29213584..29213666,+ | |id=chr1:29213584..29213666,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.92e-40!172;CL:0000566!2.92e-40!172;CL:0002032!1.53e-38!165;CL:0000837!1.53e-38!165;CL:0000988!3.89e-37!182;CL:0000763!4.52e-31!112;CL:0000049!4.52e-31!112;CL:0000738!9.07e-28!140;CL:0002031!8.16e-22!124;CL:0002087!1.27e-20!119;CL:0000766!1.00e-17!76;CL:0000839!2.99e-15!70;CL:0000557!7.38e-15!71;CL:0002009!2.45e-13!65;CL:0002194!4.94e-13!63;CL:0000576!4.94e-13!63;CL:0000040!4.94e-13!63;CL:0000559!4.94e-13!63;CL:0002057!1.14e-10!42;CL:0000860!3.19e-10!45;CL:0000542!2.15e-07!53;CL:0000051!2.15e-07!53;CL:0000838!5.41e-07!52 | |ontology_enrichment_celltype=CL:0000037!2.92e-40!172;CL:0000566!2.92e-40!172;CL:0002032!1.53e-38!165;CL:0000837!1.53e-38!165;CL:0000988!3.89e-37!182;CL:0000763!4.52e-31!112;CL:0000049!4.52e-31!112;CL:0000738!9.07e-28!140;CL:0002031!8.16e-22!124;CL:0002087!1.27e-20!119;CL:0000766!1.00e-17!76;CL:0000839!2.99e-15!70;CL:0000557!7.38e-15!71;CL:0002009!2.45e-13!65;CL:0002194!4.94e-13!63;CL:0000576!4.94e-13!63;CL:0000040!4.94e-13!63;CL:0000559!4.94e-13!63;CL:0002057!1.14e-10!42;CL:0000860!3.19e-10!45;CL:0000542!2.15e-07!53;CL:0000051!2.15e-07!53;CL:0000838!5.41e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.95e-10;39!CL:0000234;4.95e-10;39!CL:0000860;1.10e-09;33!CL:0002057;1.10e-09;33!CL:0000763;3.35e-09;100!CL:0000766;5.74e-08;69!CL:0000576;8.33e-08;48!CL:0000988;5.63e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.18e-41,168;CL:0002032,4.71e-39,161;CL:0000837,4.71e-39,161;CL:0000988,4.44e-38,177;CL:0000763,8.69e-32,108;CL:0000049,8.69e-32,108;CL:0000738,3.26e-28,136;CL:0002031,3.30e-22,120;CL:0002087,5.15e-21,115;CL:0000766,2.47e-18,72;CL:0000839,8.24e-16,66;CL:0000557,2.17e-15,67;CL:0002009,7.43e-14,61;CL:0002194,1.48e-13,59;CL:0000576,1.48e-13,59;CL:0000040,1.48e-13,59;CL:0000559,1.48e-13,59;CL:0000473,1.03e-12,48;CL:0000234,1.03e-12,48;CL:0000860,1.13e-10,42;CL:0002057,1.13e-10,42;CL:0000542,2.14e-07,53;CL:0000051,2.14e-07,53;CL:0000838,5.39e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000049;4.02e-09;108!CL:0002057;3.87e-08;42 | |||
|ontology_enrichment_disease=DOID:1240!1.43e-10!39;DOID:8692!2.14e-10!31;DOID:2531!5.49e-10!51;DOID:0060083!5.49e-10!51 | |ontology_enrichment_disease=DOID:1240!1.43e-10!39;DOID:8692!2.14e-10!31;DOID:2531!5.49e-10!51;DOID:0060083!5.49e-10!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.07e-10;31!DOID:1240;2.49e-08;39!DOID:2531;8.82e-07;51!DOID:0060083;8.82e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.42e-10,39;DOID:8692,2.12e-10,31;DOID:2531,5.45e-10,51;DOID:0060083,5.45e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.04e-21!102;UBERON:0003061!7.04e-21!102;UBERON:0002193!3.03e-20!112;UBERON:0007023!9.04e-18!115;UBERON:0002405!1.26e-13!115;UBERON:0002371!2.52e-12!80;UBERON:0001474!1.77e-11!86;UBERON:0000178!1.71e-09!15;UBERON:0000179!1.71e-09!15;UBERON:0000463!1.71e-09!15;UBERON:0004765!1.71e-07!101;UBERON:0001434!1.71e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!7.04e-21!102;UBERON:0003061!7.04e-21!102;UBERON:0002193!3.03e-20!112;UBERON:0007023!9.04e-18!115;UBERON:0002405!1.26e-13!115;UBERON:0002371!2.52e-12!80;UBERON:0001474!1.77e-11!86;UBERON:0000178!1.71e-09!15;UBERON:0000179!1.71e-09!15;UBERON:0000463!1.71e-09!15;UBERON:0004765!1.71e-07!101;UBERON:0001434!1.71e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-09;15!UBERON:0000179;1.63e-09;15!UBERON:0000463;1.63e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.14e-21,98;UBERON:0003061,2.14e-21,98;UBERON:0002193,9.42e-21,108;UBERON:0007023,1.54e-17,114;UBERON:0002405,6.30e-14,93;UBERON:0002371,1.09e-12,76;UBERON:0001474,8.88e-12,82;UBERON:0000178,1.70e-09,15;UBERON:0000179,1.70e-09,15;UBERON:0000463,1.70e-09,15;UBERON:0004765,4.22e-09,90 | |||
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| ||
|short_description=p1@EPB41 | |short_description=p1@EPB41 | ||
}} | }} |
Latest revision as of 11:05, 17 September 2015
Short description: | p1@EPB41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPB41_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000343067, ENST00000349460, ENST00000356093, ENST00000358989, ENST00000373800, ENST00000398861, ENST00000398863, ENST00000398865, ENST00000482464, NM_001166005, NM_001166007, NM_004437, NM_203342, NM_203343, uc001brg.1, uc001brh.1, uc001bri.1, uc001brj.1_5end |
EntrezGene: | EPB41 |
HGNC: | 3377 |
UniProt: | P11171E9PEX0E9PEW9C9JTS2Q1WWM3Q59F12Q29RX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.18e-41 | 168 |
hematopoietic oligopotent progenitor cell | 4.71e-39 | 161 |
hematopoietic multipotent progenitor cell | 4.71e-39 | 161 |
hematopoietic cell | 4.44e-38 | 177 |
myeloid cell | 8.69e-32 | 108 |
common myeloid progenitor | 8.69e-32 | 108 |
leukocyte | 3.26e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 3.30e-22 | 120 |
nongranular leukocyte | 5.15e-21 | 115 |
myeloid leukocyte | 2.47e-18 | 72 |
myeloid lineage restricted progenitor cell | 8.24e-16 | 66 |
granulocyte monocyte progenitor cell | 2.17e-15 | 67 |
macrophage dendritic cell progenitor | 7.43e-14 | 61 |
monopoietic cell | 1.48e-13 | 59 |
monocyte | 1.48e-13 | 59 |
monoblast | 1.48e-13 | 59 |
promonocyte | 1.48e-13 | 59 |
defensive cell | 1.03e-12 | 48 |
phagocyte | 1.03e-12 | 48 |
classical monocyte | 1.13e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-10 | 42 |
lymphocyte | 2.14e-07 | 53 |
common lymphoid progenitor | 2.14e-07 | 53 |
lymphoid lineage restricted progenitor cell | 5.39e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.14e-21 | 98 |
blood island | 2.14e-21 | 98 |
hemolymphoid system | 9.42e-21 | 108 |
adult organism | 1.54e-17 | 114 |
immune system | 6.30e-14 | 93 |
bone marrow | 1.09e-12 | 76 |
bone element | 8.88e-12 | 82 |
blood | 1.70e-09 | 15 |
haemolymphatic fluid | 1.70e-09 | 15 |
organism substance | 1.70e-09 | 15 |
skeletal element | 4.22e-09 | 90 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.42e-10 | 39 |
myeloid leukemia | 2.12e-10 | 31 |
hematologic cancer | 5.45e-10 | 51 |
immune system cancer | 5.45e-10 | 51 |