FFCP PHASE1:Hg19::chr1:29064330..29064340,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=68bp_to_ENST00000476976_5end | |||
|cluster_id=chr1:29064330..29064340,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_19_at_YTHDF2_5end | |||
|id=chr1:29064330..29064340,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.33e-10!7;CL:0000586!2.33e-10!7;CL:0002322!3.98e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.52e-64;7!CL:0000586;8.52e-64;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.87e-64,7;CL:0000586,6.87e-64,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.85e-45;10!UBERON:0005564;4.85e-45;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.27e-21;22!DOID:2994;4.27e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.90e-12!8;UBERON:0003135!1.37e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.52e-56;8!UBERON:0003135;4.67e-41;11!UBERON:0000991;4.76e-22;21!UBERON:0003101;4.27e-21;22!UBERON:0000079;4.27e-21;22!UBERON:0002323;9.94e-11;45!UBERON:0003133;6.31e-10;44!UBERON:0000922;1.23e-08;49!UBERON:0002553;2.45e-07;52!UBERON:0005156;2.80e-07;59!UBERON:0000990;2.80e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.57e-56,8;UBERON:0003135,4.07e-41,11;UBERON:0000991,4.43e-22,21;UBERON:0009196,4.43e-22,21;UBERON:0009117,4.43e-22,21;UBERON:0005564,4.43e-22,21;UBERON:0004176,3.99e-21,22;UBERON:0003101,3.99e-21,22;UBERON:0000079,3.99e-21,22;UBERON:0002323,1.31e-10,46;UBERON:0003133,3.32e-10,48;UBERON:0004458,5.14e-10,49;UBERON:0003886,3.61e-09,54;UBERON:0005156,1.83e-08,59;UBERON:0000990,1.83e-08,59;UBERON:0002553,3.25e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0.609868530647977,0.662648841607426,0.116193942869518,0.725627385107593,0,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.987334088507493,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.687697182986169,0.83088067605837,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.643324774124777,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,1.1218771271618,1.3360870263278,2.94063678511504,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@YTHDF2 | |||
}} |
Latest revision as of 11:05, 17 September 2015
Short description: | p19@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_YTHDF2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 68bp_to_ENST00000476976_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.87e-64 | 7 |
germ cell | 6.87e-64 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.57e-56 | 8 |
male reproductive organ | 4.07e-41 | 11 |
gonad | 4.43e-22 | 21 |
indifferent external genitalia | 4.43e-22 | 21 |
indifferent gonad | 4.43e-22 | 21 |
gonad primordium | 4.43e-22 | 21 |
external genitalia | 3.99e-21 | 22 |
male organism | 3.99e-21 | 22 |
male reproductive system | 3.99e-21 | 22 |
body cavity | 1.31e-10 | 46 |
reproductive organ | 3.32e-10 | 48 |
body cavity or lining | 5.14e-10 | 49 |
body cavity precursor | 3.61e-09 | 54 |
reproductive structure | 1.83e-08 | 59 |
reproductive system | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |