FFCP PHASE1:Hg19::chr15:39882740..39882785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-343bp_to_ENST00000560894_5end | |association_with_transcript=-343bp_to_ENST00000560894_5end | ||
|cluster_id=chr15:39882740..39882785,+ | |||
|coexpression_cluster_id=C142 | |coexpression_cluster_id=C142 | ||
|description=CAGE_peak_6_at_THBS1_5end | |description=CAGE_peak_6_at_THBS1_5end | ||
|id=chr15:39882740..39882785,+ | |id=chr15:39882740..39882785,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.04e-19!180;CL:0000057!1.06e-16!75;CL:0002371!1.10e-16!591;CL:0000222!1.48e-14!119;CL:0000220!1.56e-13!246;CL:0000144!2.86e-13!625;CL:0002321!6.01e-13!248;CL:0000548!1.72e-12!679;CL:0000004!1.72e-12!679;CL:0000255!1.72e-12!679;CL:0000012!8.65e-12!682;CL:0002139!2.15e-11!24;CL:0000115!9.56e-11!35;CL:0002078!2.16e-09!44;CL:0000071!8.40e-09!18;CL:0002546!8.40e-09!18;CL:0000213!4.76e-08!57;CL:0000215!4.76e-08!57;CL:0002620!1.13e-07!23;CL:0002334!1.28e-07!12;CL:0000680!2.09e-07!57;CL:0000056!2.09e-07!57;CL:0000355!2.09e-07!57;CL:0000187!9.62e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.04e-19!180;CL:0000057!1.06e-16!75;CL:0002371!1.10e-16!591;CL:0000222!1.48e-14!119;CL:0000220!1.56e-13!246;CL:0000144!2.86e-13!625;CL:0002321!6.01e-13!248;CL:0000548!1.72e-12!679;CL:0000004!1.72e-12!679;CL:0000255!1.72e-12!679;CL:0000012!8.65e-12!682;CL:0002139!2.15e-11!24;CL:0000115!9.56e-11!35;CL:0002078!2.16e-09!44;CL:0000071!8.40e-09!18;CL:0002546!8.40e-09!18;CL:0000213!4.76e-08!57;CL:0000215!4.76e-08!57;CL:0002620!1.13e-07!23;CL:0002334!1.28e-07!12;CL:0000680!2.09e-07!57;CL:0000056!2.09e-07!57;CL:0000355!2.09e-07!57;CL:0000187!9.62e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.25e-13;24!CL:0000115;1.14e-10;36!CL:0000071;3.75e-10;18!CL:0002334;6.93e-09;12!CL:0002078;1.02e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.81e-17,76;CL:0000222,4.16e-14,121;CL:0002139,2.92e-13,24;CL:0000115,1.03e-12,36;CL:0002321,5.65e-11,250;CL:0002078,1.24e-10,45;CL:0000071,3.53e-10,18;CL:0002546,3.53e-10,18;CL:0000213,5.08e-09,58;CL:0000215,5.08e-09,58;CL:0002334,8.99e-09,12;CL:0000723,4.58e-08,433;CL:0000048,1.17e-07,427;CL:0000034,4.45e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002546;3.75e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.19e-17!84;UBERON:0000468!2.08e-15!659;UBERON:0002049!6.45e-15!79;UBERON:0007798!6.45e-15!79;UBERON:0000055!2.53e-14!69;UBERON:0000467!7.44e-14!625;UBERON:0001981!7.55e-14!60;UBERON:0007500!7.55e-14!60;UBERON:0004537!7.55e-14!60;UBERON:0006965!7.55e-14!60;UBERON:0000480!1.29e-13!626;UBERON:0004535!1.37e-13!110;UBERON:0001009!2.28e-13!113;UBERON:0003914!3.55e-13!118;UBERON:0003102!5.00e-12!95;UBERON:0000926!4.39e-11!448;UBERON:0004120!4.39e-11!448;UBERON:0006603!4.39e-11!448;UBERON:0001637!1.48e-10!42;UBERON:0003509!1.48e-10!42;UBERON:0004572!1.48e-10!42;UBERON:0000490!2.03e-10!138;UBERON:0002199!2.00e-09!45;UBERON:0002416!2.00e-09!45;UBERON:0001986!8.40e-09!18;UBERON:0004638!8.40e-09!18;UBERON:0004852!8.40e-09!18;UBERON:0000914!9.12e-09!83;UBERON:0002329!9.12e-09!83;UBERON:0003077!9.12e-09!83;UBERON:0003059!9.12e-09!83;UBERON:0007282!9.12e-09!83;UBERON:0009618!9.12e-09!83;UBERON:0007285!9.12e-09!83;UBERON:0005256!1.02e-08!143;UBERON:0000486!2.22e-08!82;UBERON:0000487!2.32e-08!22;UBERON:0002097!2.99e-08!40;UBERON:0002100!4.30e-08!216;UBERON:0006914!5.78e-08!25;UBERON:0004923!1.56e-07!57;UBERON:0004573!2.86e-07!33;UBERON:0004571!2.86e-07!33;UBERON:0003081!3.66e-07!216;UBERON:0002050!7.12e-07!605;UBERON:0005423!7.12e-07!605;UBERON:0000923!7.83e-07!604;UBERON:0005291!7.83e-07!604;UBERON:0006598!7.83e-07!604;UBERON:0002532!7.83e-07!604;UBERON:0004290!9.88e-07!70 | |ontology_enrichment_uberon=UBERON:0004872!4.19e-17!84;UBERON:0000468!2.08e-15!659;UBERON:0002049!6.45e-15!79;UBERON:0007798!6.45e-15!79;UBERON:0000055!2.53e-14!69;UBERON:0000467!7.44e-14!625;UBERON:0001981!7.55e-14!60;UBERON:0007500!7.55e-14!60;UBERON:0004537!7.55e-14!60;UBERON:0006965!7.55e-14!60;UBERON:0000480!1.29e-13!626;UBERON:0004535!1.37e-13!110;UBERON:0001009!2.28e-13!113;UBERON:0003914!3.55e-13!118;UBERON:0003102!5.00e-12!95;UBERON:0000926!4.39e-11!448;UBERON:0004120!4.39e-11!448;UBERON:0006603!4.39e-11!448;UBERON:0001637!1.48e-10!42;UBERON:0003509!1.48e-10!42;UBERON:0004572!1.48e-10!42;UBERON:0000490!2.03e-10!138;UBERON:0002199!2.00e-09!45;UBERON:0002416!2.00e-09!45;UBERON:0001986!8.40e-09!18;UBERON:0004638!8.40e-09!18;UBERON:0004852!8.40e-09!18;UBERON:0000914!9.12e-09!83;UBERON:0002329!9.12e-09!83;UBERON:0003077!9.12e-09!83;UBERON:0003059!9.12e-09!83;UBERON:0007282!9.12e-09!83;UBERON:0009618!9.12e-09!83;UBERON:0007285!9.12e-09!83;UBERON:0005256!1.02e-08!143;UBERON:0000486!2.22e-08!82;UBERON:0000487!2.32e-08!22;UBERON:0002097!2.99e-08!40;UBERON:0002100!4.30e-08!216;UBERON:0006914!5.78e-08!25;UBERON:0004923!1.56e-07!57;UBERON:0004573!2.86e-07!33;UBERON:0004571!2.86e-07!33;UBERON:0003081!3.66e-07!216;UBERON:0002050!7.12e-07!605;UBERON:0005423!7.12e-07!605;UBERON:0000923!7.83e-07!604;UBERON:0005291!7.83e-07!604;UBERON:0006598!7.83e-07!604;UBERON:0002532!7.83e-07!604;UBERON:0004290!9.88e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.75e-10;18!UBERON:0001986;3.75e-10;18!UBERON:0004852;3.75e-10;18!UBERON:0000487;9.64e-10;22!UBERON:0006914;1.75e-09;25!UBERON:0001637;3.38e-09;42!UBERON:0003509;3.38e-09;42!UBERON:0004572;3.38e-09;42!UBERON:0007500;8.75e-09;56!UBERON:0001981;8.75e-09;56!UBERON:0004537;8.75e-09;56!UBERON:0000055;9.90e-09;65!UBERON:0004573;1.90e-07;33!UBERON:0004571;1.90e-07;33!UBERON:0002097;8.05e-07;41 | |||
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|phase1_expression=42.5127407493103,133.812827431864,18.6059813406682,90.0659685178174,21.4541325325098,95.9572376510406,5.06599756336621,3.15859936713415,0.783556884599516,1.96587149201207,2.79120467188971,8.08233076881637,12.1332809985089,0.990130823680373,4.63956326019082,34.9609076154923,25.915864705031,18.9880623500717,22.9328415431538,0.246242116153576,2.24400760368678,0.626909442956176,0.286235987131057,1.50561867580173,0.627713197974014,0,0.0821005894499457,0,0,0.383829398097213,0.619264493264304,1.83884244895785,3.31326510656075,1.47901604066715,0,0,0,1.66198622559563,15.2413780077308,0.217010870715852,0.223915474239924,0,0.257575567634187,3.34415949192999,0.377875943688809,0.242584061187816,15.3403164357752,0,0.929119112685311,28.4815468398929,3.07392847834921,0.236482229888585,12.0660988257816,0,1.35426486594342,16.9418105588344,1.91034305040492,2.69668181334102,26.3232147438976,0.962787081228281,4.47535988059329,6.26717470354761,0.199463657621632,0.852449501065388,54.5593368621738,3.97169657283798,1.86846674698672,18.8436498942557,2.08593167368081,0.65156653411535,31.4807741369352,0.736555271975129,0.632924774881769,0,0,0,0.112328631146495,2.10247649978109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,7.41602858692476,3.97583067623023,8.02140657017423,8.11140506180613,2.3858578411533,10.2193322763554,0.472674085820339,3.54767035940102,0.966182642624386,0.327447688744282,2.18577172975525,1.11235332835329,0,0,0.132957960518865,0,0,0,6.55915944310127,5.16140757063675,11.108496051443,12.4367747223282,7.55098985177831,37.6911717457892,14.8386426241136,8.78616981175718,3.91342888955381,8.03329470635209,14.0990260988201,9.88353737434066,24.8943298699133,13.2358708924513,63.1910719347772,9.64437065468061,5.38870494302808,7.0945232704493,10.7321646226118,2.84779697870439,15.2057447462238,0,0,2.18047026071267,71.5639610441259,23.9331667046056,14.8298282510805,18.3575437279241,3.19201543978521,5.60677600142307,11.7423895302675,40.7001454888314,1.8672662123986,3.90660949002095,8.50001896189985,0.302714855289863,3.45705554687999,0.234321431833797,0.312160076830321,0.570471821544449,2.98897361103602,0.352303495931295,0.809364721840658,0.561803226808994,2.85815839756851,2.82518929817066,1.75653827998801,17.8200428592308,69.729274056553,0,0,1.17835279767846,0.625592599359821,0.831192346452549,6.14568669233173,77.541412337152,20.4323760112972,8.50741373700158,74.6260884465666,30.7522639898737,27.9750109530622,29.4089274162714,16.1792470904349,35.8120350663425,17.1227507825063,20.5907125334345,18.1232829599829,32.0590893290025,17.6735805393215,13.4166227159614,47.2162758047097,11.1834829032681,13.225726200218,2.89891279744945,4.90943017063502,2.00763216772303,0,0,0.116193942869518,0,0.252320850875628,0,25.0319251727706,123.502260133034,15.1948413487729,37.6138021705903,12.9938306700525,2.48444280083672,1.01150814046861,0.964044119533928,2.09558548191549,1.30727666455444,1.42362371466658,1.48314438976181,0.588664395376038,0.38474715694639,8.85786545549578,0,0.8231480226628,2.94017422771084,0,0,0,0,0.245976877086227,0.171567810298526,6.80451769533479,1.1240175325762,7.23808601363742,5.83307204498736,0,1.03993478527958,0,0.231860809950154,0.352226082707465,16.7465079402846,24.0752466539838,46.422013145242,1.58040879591855,0,0,0,0,1.87467667973554,18.4780341018745,7.79763034833126,12.0904005648845,4.94077695473735,12.651628412452,0,0,0,0,0,0.317489471460845,0,0,1.71072446022705,2.26220483947312,0,0.285826432630578,0.112131084345361,0.87192013766656,0.51336800074665,1.80980402060889,0,1.690605505112,13.5628439458284,12.4808924293639,2.05765899409714,0,1.0656887160644,1.42977993658148,0,0.823240336780769,0.325736184293735,1.77695974371273,0.791951872933429,0,1.74306691720059,0,0,0,0,9.34536936417172,2.29723871668228,2.85273810081437,5.35690834670043,8.01357657946495,2.32779252211864,0,0,0.215627574859517,0,0,0,1.54657762555539,0.167516265334349,0.637938751653163,0,2.99161459204025,0,1.8403723757871,1.00034104211935,1.89885516589815,50.1209776289245,162.727237783012,48.4146414154179,32.3310305379888,4.8151375956435,13.6444502433591,5.17365356462525,4.64957918974806,5.16233671916769,15.8128178331911,0,1.02943027143257,0.413536052245775,0.647142602455851,0.533637789017222,3.33440328590885,6.65741758041988,10.8860505598685,34.48698528681,73.9686711248461,130.787604005812,17.0425068510082,27.1204842005353,60.4810743499964,34.1361552823479,21.5893571323718,11.0088269694139,2.05317890034523,17.1353961630595,6.15915005837784,0.483437798366489,28.6724252533697,1.56537681191024,5.62590796006573,2.54927635209404,7.0807184078089,0,0,0,0,0.316654886678627,11.3733384070897,6.29346709523108,15.3300300432519,20.0495428497376,0,1.00337954770971,0.764628819135115,0,1.34324852833307,0,0,0,0,0,1.03041011647722,0.27470839445503,0,5.16838984196555,22.1020483652417,20.8889108797407,0.580024309752732,0.154048617114644,0.307007349452259,3.0324045946596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| ||
|short_description=p6@THBS1 | |short_description=p6@THBS1 | ||
}} | }} |
Latest revision as of 11:04, 17 September 2015
Short description: | p6@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -343bp_to_ENST00000560894_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.81e-17 | 76 |
mesodermal cell | 4.16e-14 | 121 |
endothelial cell of vascular tree | 2.92e-13 | 24 |
endothelial cell | 1.03e-12 | 36 |
embryonic cell | 5.65e-11 | 250 |
meso-epithelial cell | 1.24e-10 | 45 |
blood vessel endothelial cell | 3.53e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.53e-10 | 18 |
lining cell | 5.08e-09 | 58 |
barrier cell | 5.08e-09 | 58 |
preadipocyte | 8.99e-09 | 12 |
somatic stem cell | 4.58e-08 | 433 |
multi fate stem cell | 1.17e-07 | 427 |
stem cell | 4.45e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 6.34e-16 | 83 |
vessel | 8.04e-16 | 68 |
vasculature | 9.57e-15 | 78 |
vascular system | 9.57e-15 | 78 |
epithelial tube open at both ends | 1.20e-14 | 59 |
blood vessel | 1.20e-14 | 59 |
blood vasculature | 1.20e-14 | 59 |
vascular cord | 1.20e-14 | 59 |
cardiovascular system | 4.01e-12 | 109 |
circulatory system | 4.62e-12 | 112 |
epithelial tube | 7.27e-12 | 117 |
artery | 2.10e-11 | 42 |
arterial blood vessel | 2.10e-11 | 42 |
arterial system | 2.10e-11 | 42 |
surface structure | 2.44e-11 | 99 |
blood vessel endothelium | 3.53e-10 | 18 |
endothelium | 3.53e-10 | 18 |
cardiovascular system endothelium | 3.53e-10 | 18 |
mesoderm | 5.18e-10 | 315 |
mesoderm-derived structure | 5.18e-10 | 315 |
presumptive mesoderm | 5.18e-10 | 315 |
simple squamous epithelium | 6.74e-10 | 22 |
squamous epithelium | 1.24e-09 | 25 |
integument | 2.88e-09 | 46 |
integumental system | 2.88e-09 | 46 |
unilaminar epithelium | 1.54e-08 | 148 |
skin of body | 2.67e-08 | 41 |
lateral plate mesoderm | 3.68e-08 | 203 |
systemic artery | 1.37e-07 | 33 |
systemic arterial system | 1.37e-07 | 33 |
organ component layer | 1.38e-07 | 66 |