FFCP PHASE1:Hg19::chr6:2765902..2765936,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:2765902..2765936,+
|short_description=p3@WRNIP1
|description=CAGE_peak_3_at_WRNIP1_5end
|association_with_transcript=-349bp_to_ENST00000380769_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56897 | |EntrezGene=56897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20876 | |HGNC=20876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-349bp_to_ENST00000380769_5end | |||
|cluster_id=chr6:2765902..2765936,+ | |||
|description=CAGE_peak_3_at_WRNIP1_5end | |||
|id=chr6:2765902..2765936,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.16e-15!52;CL:0000542!4.00e-14!53;CL:0000051!4.00e-14!53;CL:0000084!6.44e-09!25;CL:0000827!6.44e-09!25;CL:0000791!1.89e-07!18;CL:0000789!1.89e-07!18;CL:0002420!1.89e-07!18;CL:0002419!1.89e-07!18;CL:0000790!1.89e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.43e-11;25!CL:0000791;3.78e-11;18!CL:0000789;3.78e-11;18!CL:0002419;3.78e-11;18!CL:0000542;3.27e-10;53!CL:0000624;1.69e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.86e-17,52;CL:0000542,2.39e-16,53;CL:0000051,2.39e-16,53;CL:0000084,7.20e-12,25;CL:0000827,7.20e-12,25;CL:0000791,2.11e-11,18;CL:0000789,2.11e-11,18;CL:0002420,2.11e-11,18;CL:0002419,2.11e-11,18;CL:0000790,2.11e-11,18;CL:0000624,1.34e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.78e-11;18!CL:0000051;3.27e-10;53 | |||
|ontology_enrichment_disease=DOID:305!1.46e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-08!115;UBERON:0001004!4.99e-07!72 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@WRNIP1 | |||
}} | }} |
Latest revision as of 11:03, 17 September 2015
Short description: | p3@WRNIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WRNIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -349bp_to_ENST00000380769_5end |
EntrezGene: | WRNIP1 |
HGNC: | 20876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.86e-17 | 52 |
lymphocyte | 2.39e-16 | 53 |
common lymphoid progenitor | 2.39e-16 | 53 |
T cell | 7.20e-12 | 25 |
pro-T cell | 7.20e-12 | 25 |
mature alpha-beta T cell | 2.11e-11 | 18 |
alpha-beta T cell | 2.11e-11 | 18 |
immature T cell | 2.11e-11 | 18 |
mature T cell | 2.11e-11 | 18 |
immature alpha-beta T cell | 2.11e-11 | 18 |
CD4-positive, alpha-beta T cell | 1.34e-08 | 6 |