FFCP PHASE1:Hg19::chr11:2466218..2466255,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2466218..2466255,+
|short_description=p1@KCNQ1
|description=CAGE_peak_1_at_KCNQ1_5end
|association_with_transcript=0bp_to_ENST00000155840,NM_000218,uc001l...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3784 | |EntrezGene=3784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6294 | |HGNC=6294 | ||
|UniProt=P51787, | |TSSclassifier=strong | ||
|UniProt=P51787,Q96AI9,A0FIK7 | |||
|association_with_transcript=0bp_to_ENST00000155840,NM_000218,uc001lwn.2,uc009ydo.1_5end | |||
|cluster_id=chr11:2466218..2466255,+ | |||
|description=CAGE_peak_1_at_KCNQ1_5end | |||
|id=chr11:2466218..2466255,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.97e-38!140;CL:0000037!5.46e-37!172;CL:0000566!5.46e-37!172;CL:0000766!1.15e-35!76;CL:0002032!2.72e-35!165;CL:0000837!2.72e-35!165;CL:0000763!7.13e-34!112;CL:0000049!7.13e-34!112;CL:0000988!2.64e-33!182;CL:0000557!2.19e-31!71;CL:0002031!1.90e-28!124;CL:0000839!2.47e-28!70;CL:0002087!1.42e-27!119;CL:0002009!1.64e-27!65;CL:0002194!1.24e-26!63;CL:0000576!1.24e-26!63;CL:0000040!1.24e-26!63;CL:0000559!1.24e-26!63;CL:0002057!4.39e-25!42;CL:0000860!4.84e-23!45;CL:0000094!7.91e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.29e-21;33!CL:0002057;5.29e-21;33!CL:0000576;4.28e-20;48!CL:0000473;1.21e-19;39!CL:0000234;1.21e-19;39!CL:0000766;9.33e-19;69!CL:0000763;1.74e-11;100!CL:0000738;5.70e-11;136!CL:0002087;1.72e-10;104!CL:0000094;1.15e-07;8!CL:0000988;1.90e-07;177!CL:0000451;5.50e-07;10!CL:0000990;6.99e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.57e-49,136;CL:0000037,7.12e-46,168;CL:0000766,9.53e-45,72;CL:0002032,2.09e-44,161;CL:0000837,2.09e-44,161;CL:0000988,7.33e-41,177;CL:0000763,7.64e-41,108;CL:0000049,7.64e-41,108;CL:0000557,1.26e-39,67;CL:0002031,1.53e-37,120;CL:0002087,2.74e-36,115;CL:0000839,3.41e-36,66;CL:0002009,4.99e-35,61;CL:0002194,5.16e-34,59;CL:0000576,5.16e-34,59;CL:0000040,5.16e-34,59;CL:0000559,5.16e-34,59;CL:0000473,6.20e-31,48;CL:0000234,6.20e-31,48;CL:0000860,8.98e-29,42;CL:0002057,8.98e-29,42;CL:0000094,1.18e-07,8;CL:0002393,3.71e-07,9;CL:0002397,3.71e-07,9;CL:0000451,5.59e-07,10;CL:0000990,6.64e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.80e-21;42!CL:0000049;5.14e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.12e-31!102;UBERON:0003061!6.12e-31!102;UBERON:0002193!6.72e-27!112;UBERON:0007023!1.30e-25!115;UBERON:0002371!1.12e-24!80;UBERON:0001474!4.32e-23!86;UBERON:0004765!5.94e-16!101;UBERON:0001434!5.94e-16!101;UBERON:0002405!5.42e-15!115;UBERON:0000178!2.95e-07!15;UBERON:0000179!2.95e-07!15;UBERON:0000463!2.95e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.58e-07;15!UBERON:0000179;2.58e-07;15!UBERON:0000463;2.58e-07;15!UBERON:0007023;3.73e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.31e-38,98;UBERON:0003061,4.31e-38,98;UBERON:0002193,2.12e-33,108;UBERON:0002371,2.00e-31,76;UBERON:0001474,7.25e-28,82;UBERON:0002405,6.19e-27,93;UBERON:0007023,8.80e-25,114;UBERON:0004765,6.49e-23,90;UBERON:0001434,1.33e-18,100;UBERON:0003081,2.55e-09,203;UBERON:0000178,2.60e-07,15;UBERON:0000179,2.60e-07,15;UBERON:0000463,2.60e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,33.8293278090057,10.3633937486247,36.2269728559618,0,0.30120591877825,2.58827807116751,4.02829443017569,0,0.880801318004542,43.2116418654864,46.726856260543,42.3171197895911,17.2414915164742,15.87078963493,21.6363476812717,21.0827446230369,21.1610528465733,24.5009901799694,22.08075850604,24.6700732813095,24.4668033007132,22.4400066011277,23.3106242941482,20.3374717704183,33.0955853507154,32.2742341791913,37.9194162464157,21.2713843683143,20.4679612543384,17.5284317867166,22.6502080354468,27.5998963285441,35.1635419189473,20.7806319117631,21.5420750231362,22.5899117782328,16.8321358404579,18.7237124148076,13.0792672289071,33.9185698096603,25.0311800841697,25.1939059857935,17.5565855763677,19.1504370713534,21.835904733421,23.0268262080017,23.3864729961548,22.2238164238878,47.6273396061139,42.9505913526708,32.7880196862043,11.9705352371324,10.7415005687509,10.4118567645841,21.1195493353587,18.0225741716503,16.011166569544,16.2157484575273,24.8245511962328,13.2193061189531,11.8988077101275,11.4486450544244,25.6145836099252,24.6639619535794,32.4932243906445,0,3.36305137788922,0,19.4742672412695,20.4365596629566,15.0089094269642,10.1983762188314,9.45174573237412,4.73447805734733,15.5861382726329,4.34500781852177,4.71369451959739,3.98761010250518,2.97884250141517,4.22701355094728,3.12142434143708,14.1416597959161,21.831651405082,26.3720808018898,24.1707097954158,23.0085112157153,33.4513676175926,10.0845315000834,4.21542542962113,3.4362744548263,8.34964983664359,9.5569624297229,5.85975108470777,5.70271226669025,6.17357988218868,10.6228887258167,13.742379920758,8.99753557767264,1.64225599384209,5.24177532384304,2.40696176205157,10.2825326756787,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,10.0853888133239,0.364295288292542,0,49.0066564418572,57.8110727833567,10.6366368415092,4.76981248610684,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8985168820977,34.9002237733493,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.975789649036763,0.795178609928912,0.69716365721711,0.518305275076852,0.504641701751257,0.72995471815166,0,0,0,0,0,1.65629520055781,1.85443159085912,1.20505514941741,1.21323370005633,1.96091499683166,0.949082476444386,1.34831308160164,2.35465758150415,0.38474715694639,11.0723318193697,0,0,0,0,0,4.13552934676983,0,1.22988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0.288732895522148,0,0,0,0,16.2503224017682,3.04205544681009,6.39113997841531,0,0,0,0,0,0,15.2725603747742,203.039688834499,319.077969817248,279.448589675488,292.629960682349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,12.162378064119,20.0902836572851,4.21667878966063,0,0,0,0,0,0,0,6.30498432646167,4.74380664690938,8.2139543219039,0,0,0,0,0,50.9324776284084,71.798750208966,65.8920666363296,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,27.500147474344,35.1614147334345,24.1204280635784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0.200506470303285,0.184161977871793,0,0,0,2.25599806453706,1.46329140498388,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,0.509752546090077,4.98645605357235,0,0,0,0.769350375349168,0,0,5.15205058238611,0.27470839445503,0.330037999682352,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0,1.06838442776085,0.991709492165869,1.53752053892085,1.27612712494584,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,0,0,0,0,0.865999014529609,1.34060455107157,2.17781969722645,6.96664125748166,1.29151611801369,1.68471475667626,7.09488245658681,4.36474460393223,29.939408944698,35.9379487356916,30.1913009202306,34.7818392168372,36.1998800315851,36.9629787379849,28.081634736382,26.9662559940052,0.106824071127473,0,0,2.78704762688578,0,0,0,5.9873811429845,7.08569869489757,5.08016598537319,0,4.21195767170188,0.456469358066384,0,17.5444133963047,8.63388066788177,4.81764225311099,2.82519590067467,20.0147731714453,20.6103206853459,6.45205605047762,7.38131156044973,7.34136223532397,3.71237381263877,0,0,12.4409612098952,0,1.4098700508785,40.048075647359,6.00683535014765,0.36408156524854,0,1.13654458722565,0,0.593929361665277,0,3.97659059106519,2.2507106625682,0,0,3.80025734630388,5.37969568277888,11.8802083678393,0,0,0,0,0,0.537063524026827,13.3008816258987,10.2589141862411,23.948309234694,0,5.81599647657131,1.20598527610407,0,1.5625665665114,0,4.34999745260876,0.910347586283997,0,0,1.72371686620732,0,0,0,1.92954301800653,0,0.442317039724898,0.295547618953547,0.87754158861589,0,1.67308493134324,8.38757817691388,0,0.23056390438806,0,0.108647371922008,0.957003479195758,0.274792780205587,2.66517388009317,0,4.23846692266567,0.664846727600626,0,0,0,0,0.158936578980379,0,0,0,0,39.8104772431402,29.1025387215986,8.55442202907076,0,0.123563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| ||
|short_description=p1@KCNQ1 | |||
}} | }} |
Latest revision as of 10:57, 17 September 2015
Short description: | p1@KCNQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNQ1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000155840, NM_000218, uc001lwn.2, uc009ydo.1_5end |
EntrezGene: | KCNQ1 |
HGNC: | 6294 |
UniProt: | P51787Q96AI9A0FIK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.57e-49 | 136 |
hematopoietic stem cell | 7.12e-46 | 168 |
myeloid leukocyte | 9.53e-45 | 72 |
hematopoietic oligopotent progenitor cell | 2.09e-44 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-44 | 161 |
hematopoietic cell | 7.33e-41 | 177 |
myeloid cell | 7.64e-41 | 108 |
common myeloid progenitor | 7.64e-41 | 108 |
granulocyte monocyte progenitor cell | 1.26e-39 | 67 |
hematopoietic lineage restricted progenitor cell | 1.53e-37 | 120 |
nongranular leukocyte | 2.74e-36 | 115 |
myeloid lineage restricted progenitor cell | 3.41e-36 | 66 |
macrophage dendritic cell progenitor | 4.99e-35 | 61 |
monopoietic cell | 5.16e-34 | 59 |
monocyte | 5.16e-34 | 59 |
monoblast | 5.16e-34 | 59 |
promonocyte | 5.16e-34 | 59 |
defensive cell | 6.20e-31 | 48 |
phagocyte | 6.20e-31 | 48 |
classical monocyte | 8.98e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.98e-29 | 42 |
granulocyte | 1.18e-07 | 8 |
intermediate monocyte | 3.71e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.71e-07 | 9 |
dendritic cell | 5.59e-07 | 10 |
conventional dendritic cell | 6.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.31e-38 | 98 |
blood island | 4.31e-38 | 98 |
hemolymphoid system | 2.12e-33 | 108 |
bone marrow | 2.00e-31 | 76 |
bone element | 7.25e-28 | 82 |
immune system | 6.19e-27 | 93 |
adult organism | 8.80e-25 | 114 |
skeletal element | 6.49e-23 | 90 |
skeletal system | 1.33e-18 | 100 |
lateral plate mesoderm | 2.55e-09 | 203 |
blood | 2.60e-07 | 15 |
haemolymphatic fluid | 2.60e-07 | 15 |
organism substance | 2.60e-07 | 15 |