FFCP PHASE1:Hg19::chr17:73389854..73389993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2885 | |EntrezGene=2885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4566 | |HGNC=4566 | ||
|TSSclassifier=strong | |||
|UniProt=P62993 | |UniProt=P62993 | ||
|association_with_transcript=0bp_to_ENST00000392564_5end | |association_with_transcript=0bp_to_ENST00000392564_5end | ||
|cluster_id=chr17:73389854..73389993,- | |||
|description=CAGE_peak_2_at_GRB2_5end | |description=CAGE_peak_2_at_GRB2_5end | ||
|id=chr17:73389854..73389993,- | |id=chr17:73389854..73389993,- | ||
|ontology_enrichment_celltype=CL:0000055!7.14e-21!180;CL:0002321!3.28e-15!248;CL:0000220!6.25e-15!246;CL:0000183!6.59e-13!59;CL:0000393!1.89e-12!60;CL:0000211!1.89e-12!60;CL:0000222!6.91e-12!119;CL:0000680!1.65e-11!57;CL:0000056!1.65e-11!57;CL:0000355!1.65e-11!57;CL:0000187!3.32e-11!54;CL:0000192!9.02e-11!42;CL:0000514!9.02e-11!42;CL:0000359!4.38e-09!32;CL:0000057!1.74e-07!75;CL:0000221!3.60e-07!71 | |ontology_enrichment_celltype=CL:0000055!7.14e-21!180;CL:0002321!3.28e-15!248;CL:0000220!6.25e-15!246;CL:0000183!6.59e-13!59;CL:0000393!1.89e-12!60;CL:0000211!1.89e-12!60;CL:0000222!6.91e-12!119;CL:0000680!1.65e-11!57;CL:0000056!1.65e-11!57;CL:0000355!1.65e-11!57;CL:0000187!3.32e-11!54;CL:0000192!9.02e-11!42;CL:0000514!9.02e-11!42;CL:0000359!4.38e-09!32;CL:0000057!1.74e-07!75;CL:0000221!3.60e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.17e-09;32!CL:0000192;2.40e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.63e-15,250;CL:0000393,1.01e-12,61;CL:0000211,1.01e-12,61;CL:0000222,5.36e-12,121;CL:0000680,9.07e-12,58;CL:0000056,9.07e-12,58;CL:0000355,9.07e-12,58;CL:0000187,1.84e-11,55;CL:0000192,5.17e-11,43;CL:0000514,5.17e-11,43;CL:0000359,3.65e-09,32;CL:0000057,1.18e-07,76;CL:0000221,1.96e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;2.40e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.76e-36!312;UBERON:0000483!1.65e-35!309;UBERON:0000475!3.26e-33!365;UBERON:0000073!1.17e-28!94;UBERON:0001016!1.17e-28!94;UBERON:0001017!4.99e-28!82;UBERON:0004121!2.20e-27!169;UBERON:0005743!2.38e-27!86;UBERON:0000924!6.66e-27!173;UBERON:0006601!6.66e-27!173;UBERON:0000025!2.13e-26!194;UBERON:0003075!6.42e-25!86;UBERON:0007284!6.42e-25!86;UBERON:0004111!9.55e-25!241;UBERON:0001049!1.83e-24!57;UBERON:0005068!1.83e-24!57;UBERON:0006241!1.83e-24!57;UBERON:0007135!1.83e-24!57;UBERON:0000955!3.07e-24!69;UBERON:0006238!3.07e-24!69;UBERON:0002346!5.77e-24!90;UBERON:0000033!1.20e-23!123;UBERON:0002616!1.58e-23!59;UBERON:0000477!1.86e-23!286;UBERON:0000481!4.72e-22!347;UBERON:0000468!6.89e-22!659;UBERON:0000153!2.81e-21!129;UBERON:0007811!2.81e-21!129;UBERON:0003056!3.74e-19!61;UBERON:0000467!6.41e-19!625;UBERON:0000480!1.31e-18!626;UBERON:0002780!1.72e-18!41;UBERON:0001890!1.72e-18!41;UBERON:0006240!1.72e-18!41;UBERON:0003080!7.58e-18!42;UBERON:0000922!5.29e-17!612;UBERON:0001893!1.11e-16!34;UBERON:0002020!3.41e-16!34;UBERON:0003528!3.41e-16!34;UBERON:0002791!4.48e-16!33;UBERON:0001869!6.79e-16!32;UBERON:0002050!1.83e-15!605;UBERON:0005423!1.83e-15!605;UBERON:0000064!2.25e-15!219;UBERON:0000914!2.88e-15!83;UBERON:0002329!2.88e-15!83;UBERON:0003077!2.88e-15!83;UBERON:0003059!2.88e-15!83;UBERON:0007282!2.88e-15!83;UBERON:0009618!2.88e-15!83;UBERON:0007285!2.88e-15!83;UBERON:0000923!2.90e-15!604;UBERON:0005291!2.90e-15!604;UBERON:0006598!2.90e-15!604;UBERON:0002532!2.90e-15!604;UBERON:0005256!9.71e-14!143;UBERON:0000956!3.45e-13!25;UBERON:0000203!3.45e-13!25;UBERON:0000486!6.16e-13!82;UBERON:0002385!3.02e-12!63;UBERON:0001015!3.02e-12!63;UBERON:0000383!3.02e-12!63;UBERON:0004290!3.09e-12!70;UBERON:0002619!3.23e-12!22;UBERON:0001134!4.45e-12!61;UBERON:0002036!4.45e-12!61;UBERON:0003082!4.45e-12!61;UBERON:0002049!1.98e-11!79;UBERON:0007798!1.98e-11!79;UBERON:0001950!3.60e-11!20;UBERON:0002100!1.37e-09!216;UBERON:0003914!1.60e-09!118;UBERON:0001637!3.79e-09!42;UBERON:0003509!3.79e-09!42;UBERON:0004572!3.79e-09!42;UBERON:0001981!7.07e-09!60;UBERON:0007500!7.07e-09!60;UBERON:0004537!7.07e-09!60;UBERON:0006965!7.07e-09!60;UBERON:0000055!7.25e-09!69;UBERON:0000490!1.98e-08!138;UBERON:0004872!4.49e-08!84;UBERON:0004573!6.07e-08!33;UBERON:0004571!6.07e-08!33;UBERON:0003076!8.03e-08!15;UBERON:0003057!8.03e-08!15;UBERON:0000062!1.62e-07!511;UBERON:0004732!4.94e-07!13 | |ontology_enrichment_uberon=UBERON:0000119!3.76e-36!312;UBERON:0000483!1.65e-35!309;UBERON:0000475!3.26e-33!365;UBERON:0000073!1.17e-28!94;UBERON:0001016!1.17e-28!94;UBERON:0001017!4.99e-28!82;UBERON:0004121!2.20e-27!169;UBERON:0005743!2.38e-27!86;UBERON:0000924!6.66e-27!173;UBERON:0006601!6.66e-27!173;UBERON:0000025!2.13e-26!194;UBERON:0003075!6.42e-25!86;UBERON:0007284!6.42e-25!86;UBERON:0004111!9.55e-25!241;UBERON:0001049!1.83e-24!57;UBERON:0005068!1.83e-24!57;UBERON:0006241!1.83e-24!57;UBERON:0007135!1.83e-24!57;UBERON:0000955!3.07e-24!69;UBERON:0006238!3.07e-24!69;UBERON:0002346!5.77e-24!90;UBERON:0000033!1.20e-23!123;UBERON:0002616!1.58e-23!59;UBERON:0000477!1.86e-23!286;UBERON:0000481!4.72e-22!347;UBERON:0000468!6.89e-22!659;UBERON:0000153!2.81e-21!129;UBERON:0007811!2.81e-21!129;UBERON:0003056!3.74e-19!61;UBERON:0000467!6.41e-19!625;UBERON:0000480!1.31e-18!626;UBERON:0002780!1.72e-18!41;UBERON:0001890!1.72e-18!41;UBERON:0006240!1.72e-18!41;UBERON:0003080!7.58e-18!42;UBERON:0000922!5.29e-17!612;UBERON:0001893!1.11e-16!34;UBERON:0002020!3.41e-16!34;UBERON:0003528!3.41e-16!34;UBERON:0002791!4.48e-16!33;UBERON:0001869!6.79e-16!32;UBERON:0002050!1.83e-15!605;UBERON:0005423!1.83e-15!605;UBERON:0000064!2.25e-15!219;UBERON:0000914!2.88e-15!83;UBERON:0002329!2.88e-15!83;UBERON:0003077!2.88e-15!83;UBERON:0003059!2.88e-15!83;UBERON:0007282!2.88e-15!83;UBERON:0009618!2.88e-15!83;UBERON:0007285!2.88e-15!83;UBERON:0000923!2.90e-15!604;UBERON:0005291!2.90e-15!604;UBERON:0006598!2.90e-15!604;UBERON:0002532!2.90e-15!604;UBERON:0005256!9.71e-14!143;UBERON:0000956!3.45e-13!25;UBERON:0000203!3.45e-13!25;UBERON:0000486!6.16e-13!82;UBERON:0002385!3.02e-12!63;UBERON:0001015!3.02e-12!63;UBERON:0000383!3.02e-12!63;UBERON:0004290!3.09e-12!70;UBERON:0002619!3.23e-12!22;UBERON:0001134!4.45e-12!61;UBERON:0002036!4.45e-12!61;UBERON:0003082!4.45e-12!61;UBERON:0002049!1.98e-11!79;UBERON:0007798!1.98e-11!79;UBERON:0001950!3.60e-11!20;UBERON:0002100!1.37e-09!216;UBERON:0003914!1.60e-09!118;UBERON:0001637!3.79e-09!42;UBERON:0003509!3.79e-09!42;UBERON:0004572!3.79e-09!42;UBERON:0001981!7.07e-09!60;UBERON:0007500!7.07e-09!60;UBERON:0004537!7.07e-09!60;UBERON:0006965!7.07e-09!60;UBERON:0000055!7.25e-09!69;UBERON:0000490!1.98e-08!138;UBERON:0004872!4.49e-08!84;UBERON:0004573!6.07e-08!33;UBERON:0004571!6.07e-08!33;UBERON:0003076!8.03e-08!15;UBERON:0003057!8.03e-08!15;UBERON:0000062!1.62e-07!511;UBERON:0004732!4.94e-07!13 | ||
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| ||
|short_description=p2@GRB2 | |short_description=p2@GRB2 | ||
}} | }} |
Latest revision as of 10:49, 17 September 2015
Short description: | p2@GRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392564_5end |
EntrezGene: | GRB2 |
HGNC: | 4566 |
UniProt: | P62993 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.63e-15 | 250 |
electrically responsive cell | 1.01e-12 | 61 |
electrically active cell | 1.01e-12 | 61 |
mesodermal cell | 5.36e-12 | 121 |
muscle precursor cell | 9.07e-12 | 58 |
myoblast | 9.07e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.07e-12 | 58 |
muscle cell | 1.84e-11 | 55 |
smooth muscle cell | 5.17e-11 | 43 |
smooth muscle myoblast | 5.17e-11 | 43 |
vascular associated smooth muscle cell | 3.65e-09 | 32 |
fibroblast | 1.18e-07 | 76 |
ectodermal cell | 1.96e-07 | 72 |