FFCP PHASE1:Hg19::chr17:73389753..73389765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2885 | |EntrezGene=2885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4566 | |HGNC=4566 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000392563_5end | |association_with_transcript=-16bp_to_ENST00000392563_5end | ||
|cluster_id=chr17:73389753..73389765,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_5_at_GRB2_5end | |description=CAGE_peak_5_at_GRB2_5end | ||
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|ontology_enrichment_celltype=CL:0000860!3.10e-18!45;CL:0002057!3.64e-18!42;CL:0002194!9.01e-18!63;CL:0000576!9.01e-18!63;CL:0000040!9.01e-18!63;CL:0000559!9.01e-18!63;CL:0002009!2.56e-17!65;CL:0000766!9.59e-16!76;CL:0002087!1.57e-15!119;CL:0000557!1.01e-14!71;CL:0000839!2.05e-14!70;CL:0000738!2.48e-14!140;CL:0002031!6.18e-13!124;CL:0002032!3.37e-11!165;CL:0000837!3.37e-11!165;CL:0000037!5.54e-11!172;CL:0000566!5.54e-11!172;CL:0000763!1.91e-10!112;CL:0000049!1.91e-10!112;CL:0000988!8.15e-10!182 | |ontology_enrichment_celltype=CL:0000860!3.10e-18!45;CL:0002057!3.64e-18!42;CL:0002194!9.01e-18!63;CL:0000576!9.01e-18!63;CL:0000040!9.01e-18!63;CL:0000559!9.01e-18!63;CL:0002009!2.56e-17!65;CL:0000766!9.59e-16!76;CL:0002087!1.57e-15!119;CL:0000557!1.01e-14!71;CL:0000839!2.05e-14!70;CL:0000738!2.48e-14!140;CL:0002031!6.18e-13!124;CL:0002032!3.37e-11!165;CL:0000837!3.37e-11!165;CL:0000037!5.54e-11!172;CL:0000566!5.54e-11!172;CL:0000763!1.91e-10!112;CL:0000049!1.91e-10!112;CL:0000988!8.15e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.09e-22;39!CL:0000234;2.09e-22;39!CL:0000860;3.70e-22;33!CL:0002057;3.70e-22;33!CL:0000576;1.84e-14;48!CL:0000766;5.86e-11;69!CL:0000763;4.10e-07;100 | |ontology_enrichment_celltype_v019=CL:0000473;2.09e-22;39!CL:0000234;2.09e-22;39!CL:0000860;3.70e-22;33!CL:0002057;3.70e-22;33!CL:0000576;1.84e-14;48!CL:0000766;5.86e-11;69!CL:0000763;4.10e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.61e-32,48;CL:0000234,6.61e-32,48;CL:0000860,2.80e-27,42;CL:0002057,2.80e-27,42;CL:0002194,3.14e-27,59;CL:0000576,3.14e-27,59;CL:0000040,3.14e-27,59;CL:0000559,3.14e-27,59;CL:0002009,4.98e-26,61;CL:0000766,8.77e-26,72;CL:0000839,2.38e-23,66;CL:0000557,7.31e-23,67;CL:0002087,5.83e-19,115;CL:0000738,1.84e-17,136;CL:0000763,6.02e-17,108;CL:0000049,6.02e-17,108;CL:0002031,1.78e-16,120;CL:0002032,2.17e-14,161;CL:0000837,2.17e-14,161;CL:0000037,3.22e-14,168;CL:0000988,7.34e-13,177;CL:0000134,2.84e-07,354;CL:0002320,2.90e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-19;42 | |ontology_enrichment_development_v019=CL:0002057;1.08e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;8.74e-07;3!DOID:127;8.74e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;8.74e-07;3!DOID:127;8.74e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.40e-07,3;DOID:127,4.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.00e-12!102;UBERON:0003061!3.00e-12!102;UBERON:0002193!9.39e-12!112;UBERON:0002371!9.95e-12!80;UBERON:0001474!5.07e-11!86;UBERON:0002405!5.58e-10!115;UBERON:0004765!7.95e-09!101;UBERON:0001434!7.95e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!3.00e-12!102;UBERON:0003061!3.00e-12!102;UBERON:0002193!9.39e-12!112;UBERON:0002371!9.95e-12!80;UBERON:0001474!5.07e-11!86;UBERON:0002405!5.58e-10!115;UBERON:0004765!7.95e-09!101;UBERON:0001434!7.95e-09!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.01e-20,76;UBERON:0002390,6.46e-19,98;UBERON:0003061,6.46e-19,98;UBERON:0001474,3.08e-18,82;UBERON:0002193,2.40e-17,108;UBERON:0004765,7.18e-17,90;UBERON:0002405,3.62e-16,93;UBERON:0001434,3.05e-14,100;UBERON:0002204,1.67e-08,167;UBERON:0003081,8.95e-08,203;UBERON:0002384,4.21e-07,371 | |||
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| ||
|short_description=p5@GRB2 | |short_description=p5@GRB2 | ||
}} | }} |
Latest revision as of 10:46, 17 September 2015
Short description: | p5@GRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRB2_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -16bp_to_ENST00000392563_5end |
EntrezGene: | GRB2 |
HGNC: | 4566 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.61e-32 | 48 |
phagocyte | 6.61e-32 | 48 |
classical monocyte | 2.80e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-27 | 42 |
monopoietic cell | 3.14e-27 | 59 |
monocyte | 3.14e-27 | 59 |
monoblast | 3.14e-27 | 59 |
promonocyte | 3.14e-27 | 59 |
macrophage dendritic cell progenitor | 4.98e-26 | 61 |
myeloid leukocyte | 8.77e-26 | 72 |
myeloid lineage restricted progenitor cell | 2.38e-23 | 66 |
granulocyte monocyte progenitor cell | 7.31e-23 | 67 |
nongranular leukocyte | 5.83e-19 | 115 |
leukocyte | 1.84e-17 | 136 |
myeloid cell | 6.02e-17 | 108 |
common myeloid progenitor | 6.02e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 1.78e-16 | 120 |
hematopoietic oligopotent progenitor cell | 2.17e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-14 | 161 |
hematopoietic stem cell | 3.22e-14 | 168 |
hematopoietic cell | 7.34e-13 | 177 |
mesenchymal cell | 2.84e-07 | 354 |
connective tissue cell | 2.90e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.01e-20 | 76 |
hematopoietic system | 6.46e-19 | 98 |
blood island | 6.46e-19 | 98 |
bone element | 3.08e-18 | 82 |
hemolymphoid system | 2.40e-17 | 108 |
skeletal element | 7.18e-17 | 90 |
immune system | 3.62e-16 | 93 |
skeletal system | 3.05e-14 | 100 |
musculoskeletal system | 1.67e-08 | 167 |
lateral plate mesoderm | 8.95e-08 | 203 |
connective tissue | 4.21e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.40e-07 | 3 |
leiomyoma | 4.40e-07 | 3 |