FFCP PHASE1:Hg19::chr5:180018490..180018505,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:180018490..180018505,-
|short_description=p1@SCGB3A1
|description=CAGE_peak_1_at_SCGB3A1_5end
|association_with_transcript=-3bp_to_NM_052863,uc003mly.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QR1 | |UniProt=Q96QR1 | ||
|association_with_transcript=-3bp_to_NM_052863,uc003mly.2_5end | |||
|cluster_id=chr5:180018490..180018505,- | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_1_at_SCGB3A1_5end | |||
|id=chr5:180018490..180018505,- | |||
|ontology_enrichment_celltype=CL:0002057!9.75e-13!42;CL:0000860!1.75e-11!45;CL:0000766!1.05e-07!76;CL:0000839!2.31e-07!70;CL:0000557!3.53e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.70e-10;3!CL:0002396;2.70e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,2.74e-10,3;CL:0002396,2.74e-10,3;CL:0002393,1.57e-08,9;CL:0002397,1.57e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.29e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.24e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.24e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-23!115;UBERON:0002405!2.44e-07!115;UBERON:0002390!5.34e-07!102;UBERON:0003061!5.34e-07!102;UBERON:0002193!6.03e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.96e-08;2!UBERON:0000341;2.34e-08;2!UBERON:0001829;3.20e-08;2!UBERON:0006562;1.05e-07;2!UBERON:0000007;6.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.13e-18,114;UBERON:0003127,1.96e-08,2;UBERON:0000341,2.34e-08,2;UBERON:0001829,3.20e-08,2;UBERON:0004119,3.00e-07,160;UBERON:0000925,3.00e-07,160;UBERON:0006595,3.00e-07,160;UBERON:0004921,4.31e-07,118;UBERON:0001007,5.12e-07,145;UBERON:0001555,5.12e-07,145;UBERON:0007026,5.12e-07,145;UBERON:0004876,5.58e-07,11;UBERON:0000007,6.39e-07,2 | |||
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| ||
|short_description=p1@SCGB3A1 | |||
}} | }} |
Latest revision as of 10:42, 17 September 2015
Short description: | p1@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCGB3A1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | -3bp_to_NM_052863, uc003mly.2_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | Q96QR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 2.74e-10 | 3 |
CD14-low, CD16-positive monocyte | 2.74e-10 | 3 |
intermediate monocyte | 1.57e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.57e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.13e-18 | 114 |
open tracheal system trachea | 1.96e-08 | 2 |
throat | 2.34e-08 | 2 |
major salivary gland | 3.20e-08 | 2 |
endoderm-derived structure | 3.00e-07 | 160 |
endoderm | 3.00e-07 | 160 |
presumptive endoderm | 3.00e-07 | 160 |
subdivision of digestive tract | 4.31e-07 | 118 |
digestive system | 5.12e-07 | 145 |
digestive tract | 5.12e-07 | 145 |
primitive gut | 5.12e-07 | 145 |
urogenital ridge | 5.58e-07 | 11 |
pituitary gland | 6.39e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.24e-07 | 2 |