FFCP PHASE1:Hg19::chr20:6103574..6103587,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:6103574..6103587,- to FFCP PHASE1:Hg19::chr20:6103574..6103587,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55612 | |EntrezGene=55612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |HGNC=15889 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1L6 | |UniProt=G3V1L6 | ||
|association_with_transcript=89bp_to_ENST00000536936_5end | |||
|cluster_id=chr20:6103574..6103587,- | |||
|coexpression_cluster_id=C2625 | |||
|description=CAGE_peak_7_at_FERMT1_5end | |||
|id=chr20:6103574..6103587,- | |||
|ontology_enrichment_celltype=CL:0002076!1.69e-17!43;CL:0000066!8.13e-16!254;CL:0000223!1.24e-15!59;CL:0002251!6.91e-11!21;CL:0002368!3.50e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.77e-25;42!CL:0002368;6.93e-23;13!CL:0002251;5.21e-20;20!CL:0002202;8.87e-14;9!CL:0002632;8.87e-14;9!CL:0000622;1.59e-13;5!CL:0002159;2.39e-13;14!CL:0000154;3.37e-11;6!CL:0000244;8.86e-11;4!CL:0000731;8.86e-11;4!CL:0002623;3.15e-09;3!CL:0002621;3.56e-09;3!CL:0000307;5.62e-09;3!CL:0002166;6.08e-09;3!CL:0002328;8.93e-09;3!CL:0000150;2.55e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.20e-33,42;CL:0000223,7.78e-31,58;CL:0002368,9.10e-23,13;CL:0002251,4.03e-20,20;CL:0000066,9.26e-18,253;CL:0002202,1.03e-13,9;CL:0002632,1.03e-13,9;CL:0000622,1.30e-13,5;CL:0002159,2.32e-13,14;CL:0000154,2.85e-11,6;CL:0000244,1.15e-10,4;CL:0000731,1.15e-10,4;CL:0002623,3.21e-09,3;CL:0002621,3.58e-09,3;CL:0002166,4.44e-09,3;CL:0002328,7.56e-09,3;CL:0000068,9.09e-09,3;CL:0000069,9.09e-09,3;CL:0000307,9.09e-09,3;CL:0000377,9.09e-09,3;CL:0002321,1.13e-08,250;CL:0000076,9.30e-08,63;CL:0000150,2.29e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;6.75e-15;58!CL:0000377;5.62e-09;3 | |||
|ontology_enrichment_disease=DOID:305!2.90e-12!106;DOID:1749!3.10e-11!14;DOID:0050687!5.62e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.80e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.75e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.15e-20!169;UBERON:0000925!4.15e-20!169;UBERON:0006595!4.15e-20!169;UBERON:0001007!1.26e-16!155;UBERON:0001555!1.26e-16!155;UBERON:0007026!1.26e-16!155;UBERON:0001004!8.36e-15!72;UBERON:0004921!2.29e-14!129;UBERON:0004185!2.29e-14!129;UBERON:0000481!3.63e-12!347;UBERON:0000077!9.17e-12!130;UBERON:0001041!2.21e-10!98;UBERON:0000065!4.46e-10!53;UBERON:0000161!1.27e-09!35;UBERON:0000166!3.91e-09!21;UBERON:0000072!4.44e-09!46;UBERON:0000475!6.26e-09!365;UBERON:0000064!1.68e-08!219;UBERON:0000922!2.28e-08!612;UBERON:0003104!5.07e-08!238;UBERON:0009142!5.07e-08!238;UBERON:0000165!5.78e-08!28;UBERON:0000930!5.78e-08!28;UBERON:0000153!7.67e-08!129;UBERON:0007811!7.67e-08!129;UBERON:0000062!1.37e-07!511;UBERON:0000063!1.78e-07!97;UBERON:0000468!2.17e-07!659;UBERON:0000033!2.65e-07!123;UBERON:0000923!2.68e-07!604;UBERON:0005291!2.68e-07!604;UBERON:0006598!2.68e-07!604;UBERON:0002532!2.68e-07!604;UBERON:0002050!3.43e-07!605;UBERON:0005423!3.43e-07!605;UBERON:0000924!3.63e-07!173;UBERON:0006601!3.63e-07!173;UBERON:0000467!5.79e-07!625;UBERON:0000480!7.39e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.83e-15;28!UBERON:0000161;3.00e-15;19!UBERON:0000166;3.00e-15;19!UBERON:0001044;6.05e-11;6!UBERON:0003293;6.05e-11;6!UBERON:0003294;6.05e-11;6!UBERON:0010047;6.05e-11;6!UBERON:0003408;6.05e-11;6!UBERON:0000167;6.05e-11;6!UBERON:0000486;3.77e-10;12!UBERON:0007196;5.46e-10;15!UBERON:0001558;5.46e-10;15!UBERON:0003729;1.48e-09;13!UBERON:0001949;3.56e-09;3!UBERON:0004815;8.93e-09;3!UBERON:0002031;8.93e-09;3!UBERON:0000365;1.28e-08;5!UBERON:0001723;1.30e-08;3!UBERON:0001033;1.30e-08;3!UBERON:0001041;4.66e-08;14!UBERON:0002365;9.92e-08;31!UBERON:0002330;9.92e-08;31!UBERON:0000974;1.59e-07;6!UBERON:0001555;1.96e-07;54!UBERON:0005910;3.56e-07;6!UBERON:0003343;4.52e-07;4!UBERON:0004785;4.52e-07;4!UBERON:0007811;4.77e-07;52!UBERON:0001004;6.49e-07;65!UBERON:0001708;8.78e-07;4!UBERON:0008895;8.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,9.33e-18,22;UBERON:0001004,1.12e-15,74;UBERON:0000165,1.12e-14,29;UBERON:0000930,1.12e-14,29;UBERON:0004119,4.45e-14,160;UBERON:0000925,4.45e-14,160;UBERON:0006595,4.45e-14,160;UBERON:0000161,4.96e-13,36;UBERON:0003102,4.29e-12,99;UBERON:0000033,4.92e-12,56;UBERON:0000153,1.08e-11,62;UBERON:0007811,1.08e-11,62;UBERON:0001044,5.65e-11,6;UBERON:0003293,5.65e-11,6;UBERON:0003294,5.65e-11,6;UBERON:0010047,5.65e-11,6;UBERON:0000167,5.65e-11,6;UBERON:0007196,6.61e-10,15;UBERON:0001558,6.61e-10,15;UBERON:0001444,1.18e-09,49;UBERON:0003729,1.84e-09,13;UBERON:0001949,3.58e-09,3;UBERON:0004815,7.56e-09,3;UBERON:0002031,7.56e-09,3;UBERON:0001007,9.06e-09,145;UBERON:0001555,9.06e-09,145;UBERON:0007026,9.06e-09,145;UBERON:0000365,1.57e-08,5;UBERON:0001723,1.93e-08,3;UBERON:0001033,1.93e-08,3;UBERON:0010056,1.93e-08,3;UBERON:0002365,7.47e-08,31;UBERON:0002330,7.47e-08,31;UBERON:0000065,2.62e-07,54;UBERON:0005910,4.21e-07,6;UBERON:0003343,5.60e-07,4;UBERON:0004785,5.60e-07,4;UBERON:0004921,6.36e-07,118;UBERON:0001708,6.96e-07,4;UBERON:0008895,6.96e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.314843125254717,0,0,0,3.67768489791571,2.71085326900425,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.458426764241994,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,1.74437620857014,0,0,0.529636723252875,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,5.9910864480622,4.36393792945335,2.58124135850103,0.243947412259191,0.397589304964456,0.232387885739037,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0.591534000199219,0.337169380156203,0.964044119533928,0.220587945464788,0.435758888184812,0.949082476444386,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,4.60951198716227,0,1.40740561376283,1.20364978706088,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,2.81201501960331,3.69560682037491,3.96970272278682,3.76145795351963,2.3250715081117,2.68367875415648,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.232420756919918,0.725156697549733,5.41367469818869,0.736647911487171,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,0,0.764628819135115,0,0.671624264166535,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,2.87132768998086,1.30012049207304,0,0,0.154048617114644,0,0,0.107420244868274,0,0.255679882248303,0,3.14041339185858,4.61256161676255,3.31793052485919,1.31505115112215,0.464845549297286,0,0,0,1.06461206063404,0,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0,0,0,0,2.11688647996127,2.01090682660736,6.53345909167936,0,1.29151611801369,3.36942951335251,2.21715076768338,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.748562161632879,0,0,0.111443384277478,1.42068073403207,0.47748896947538,0,0,0,0.422008249231538,0,0,3.3780065300479,0,0.552567831062295,1.0077309914171,0,0.123084805461069,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,5.23449862113298,0.254253650292766,0,0,0,0,0.885741385813839,0.723578631752448,1.52581736317083,0.442317039724898,0.295547618953547,0,0,5.43752602686553,0.461701551022782,0,0,0,0.217294743844016,0,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0.865554558968364,0.995261931078505,0.884575645033392,1.22206028986725,0.296521128680622,0.123563938946503,0.417687798021821,0.471807930864739,0,0,0,2.73930466504926,1.45668227720456,0.789168805698781,1.20990716048664,0,0,0,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0,0,1.46988596121566,0.69647365264322,1.22308667769421,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.969890164884194,0,0,0.137041924646751,0.19871461170299,0.379864775735272,0.195551382734803,0.240476460754601,0.640358984218058,0.19980960958213,1.87317542300338,0.572682980829578,0,0.288109595976299,0.372757606696298,0.235694034616795,0.135904206073614,0.104602846312333,0,0.577901179803038,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,1.16495949527454,0.709048640765013,0.659326867049332,0.471824806979294,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0.687697182986169,0.415440338029185,0,1.5476039091159,0.728994679896296,7.37956312718385,0.551639951094387,0.629455057619977,0.211200673038813,0.35857467866569,0.575745591958336,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0.170388021785422,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,6.38341257770182,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.332787154610557,0.807253238237985,0,1.37478448758317,0,0,0,0,0,0.447764408660622,0,0.554805861502613,0.378806010550178,0,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,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| ||
|short_description=p7@FERMT1 | |||
}} | }} |
Latest revision as of 10:38, 17 September 2015
Short description: | p7@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FERMT1_5end |
Coexpression cluster: | C2625_oral_keratoacanthoma_bronchial_Small_ductal_squamous_Keratinocyte |
Association with transcript: | 89bp_to_ENST00000536936_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | G3V1L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.20e-33 | 42 |
endodermal cell | 7.78e-31 | 58 |
respiratory epithelial cell | 9.10e-23 | 13 |
epithelial cell of alimentary canal | 4.03e-20 | 20 |
epithelial cell | 9.26e-18 | 253 |
epithelial cell of tracheobronchial tree | 1.03e-13 | 9 |
epithelial cell of lower respiratory tract | 1.03e-13 | 9 |
acinar cell | 1.30e-13 | 5 |
general ecto-epithelial cell | 2.32e-13 | 14 |
protein secreting cell | 2.85e-11 | 6 |
transitional epithelial cell | 1.15e-10 | 4 |
urothelial cell | 1.15e-10 | 4 |
acinar cell of salivary gland | 3.21e-09 | 3 |
gingival epithelial cell | 3.58e-09 | 3 |
epithelial cell of Malassez | 4.44e-09 | 3 |
bronchial epithelial cell | 7.56e-09 | 3 |
duct epithelial cell | 9.09e-09 | 3 |
branched duct epithelial cell | 9.09e-09 | 3 |
tracheal epithelial cell | 9.09e-09 | 3 |
tracheoblast | 9.09e-09 | 3 |
embryonic cell | 1.13e-08 | 250 |
squamous epithelial cell | 9.30e-08 | 63 |
glandular epithelial cell | 2.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.75e-14 | 14 |