FFCP PHASE1:Hg19::chr19:35645618..35645684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53827 | |EntrezGene=53827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4029 | |HGNC=4029 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DB9,A8MVG1,F5H4X8 | |UniProt=Q96DB9,A8MVG1,F5H4X8 | ||
|association_with_transcript=0bp_to_ENST00000342879,ENST00000392218,ENST00000392219,ENST00000496493,ENST00000541435,ENST00000543307,NM_014164,NM_144779,NR_028406,uc002nyg.1,uc002nyh.1,uc010xsq.1_5end | |association_with_transcript=0bp_to_ENST00000342879,ENST00000392218,ENST00000392219,ENST00000496493,ENST00000541435,ENST00000543307,NM_014164,NM_144779,NR_028406,uc002nyg.1,uc002nyh.1,uc010xsq.1_5end | ||
|cluster_id=chr19:35645618..35645684,+ | |||
|description=CAGE_peak_1_at_FXYD5_5end | |description=CAGE_peak_1_at_FXYD5_5end | ||
|id=chr19:35645618..35645684,+ | |id=chr19:35645618..35645684,+ | ||
|ontology_enrichment_celltype=CL:0000003!4.58e-34!722;CL:0002371!1.66e-28!591;CL:0000144!7.51e-28!625;CL:0000012!1.03e-23!682;CL:0000548!1.73e-22!679;CL:0000004!1.73e-22!679;CL:0000255!1.73e-22!679;CL:0000063!2.16e-22!578;CL:0000048!1.28e-21!430;CL:0000034!2.43e-21!444;CL:0000723!3.17e-21!436;CL:0002057!6.06e-21!42;CL:0000037!4.98e-20!172;CL:0000566!4.98e-20!172;CL:0002087!1.52e-19!119;CL:0000860!2.14e-19!45;CL:0002032!2.23e-19!165;CL:0000837!2.23e-19!165;CL:0002031!2.25e-19!124;CL:0000134!2.15e-18!358;CL:0000738!2.69e-18!140;CL:0000988!2.78e-18!182;CL:0000766!7.18e-18!76;CL:0000557!1.09e-17!71;CL:0002320!2.23e-17!365;CL:0000839!2.68e-17!70;CL:0002194!1.72e-16!63;CL:0000576!1.72e-16!63;CL:0000040!1.72e-16!63;CL:0000559!1.72e-16!63;CL:0000763!7.82e-16!112;CL:0000049!7.82e-16!112;CL:0002009!9.11e-16!65;CL:0000219!2.83e-12!390;CL:0000791!1.02e-07!18;CL:0000789!1.02e-07!18;CL:0002420!1.02e-07!18;CL:0002419!1.02e-07!18;CL:0000790!1.02e-07!18;CL:0000359!3.57e-07!32;CL:0000222!4.36e-07!119 | |ontology_enrichment_celltype=CL:0000003!4.58e-34!722;CL:0002371!1.66e-28!591;CL:0000144!7.51e-28!625;CL:0000012!1.03e-23!682;CL:0000548!1.73e-22!679;CL:0000004!1.73e-22!679;CL:0000255!1.73e-22!679;CL:0000063!2.16e-22!578;CL:0000048!1.28e-21!430;CL:0000034!2.43e-21!444;CL:0000723!3.17e-21!436;CL:0002057!6.06e-21!42;CL:0000037!4.98e-20!172;CL:0000566!4.98e-20!172;CL:0002087!1.52e-19!119;CL:0000860!2.14e-19!45;CL:0002032!2.23e-19!165;CL:0000837!2.23e-19!165;CL:0002031!2.25e-19!124;CL:0000134!2.15e-18!358;CL:0000738!2.69e-18!140;CL:0000988!2.78e-18!182;CL:0000766!7.18e-18!76;CL:0000557!1.09e-17!71;CL:0002320!2.23e-17!365;CL:0000839!2.68e-17!70;CL:0002194!1.72e-16!63;CL:0000576!1.72e-16!63;CL:0000040!1.72e-16!63;CL:0000559!1.72e-16!63;CL:0000763!7.82e-16!112;CL:0000049!7.82e-16!112;CL:0002009!9.11e-16!65;CL:0000219!2.83e-12!390;CL:0000791!1.02e-07!18;CL:0000789!1.02e-07!18;CL:0002420!1.02e-07!18;CL:0002419!1.02e-07!18;CL:0000790!1.02e-07!18;CL:0000359!3.57e-07!32;CL:0000222!4.36e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.58e-17;33!CL:0002057;9.58e-17;33!CL:0000473;4.82e-15;39!CL:0000234;4.82e-15;39!CL:0000576;3.06e-12;48!CL:0000766;1.19e-10;69!CL:0000791;1.02e-07;18!CL:0000789;1.02e-07;18!CL:0002419;1.02e-07;18!CL:0000763;1.70e-07;100!CL:0002087;4.48e-07;104!CL:0000359;5.88e-07;32 | |ontology_enrichment_celltype_v019=CL:0000860;9.58e-17;33!CL:0002057;9.58e-17;33!CL:0000473;4.82e-15;39!CL:0000234;4.82e-15;39!CL:0000576;3.06e-12;48!CL:0000766;1.19e-10;69!CL:0000791;1.02e-07;18!CL:0000789;1.02e-07;18!CL:0002419;1.02e-07;18!CL:0000763;1.70e-07;100!CL:0002087;4.48e-07;104!CL:0000359;5.88e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.19e-22,48;CL:0000234,4.19e-22,48;CL:0000048,2.29e-21,427;CL:0000034,4.44e-21,441;CL:0000723,5.73e-21,433;CL:0000860,6.06e-21,42;CL:0002057,6.06e-21,42;CL:0000037,2.49e-20,168;CL:0002087,4.97e-20,115;CL:0002031,7.86e-20,120;CL:0002032,1.10e-19,161;CL:0000837,1.10e-19,161;CL:0000738,1.16e-18,136;CL:0000766,1.25e-18,72;CL:0000557,1.67e-18,67;CL:0000134,2.04e-18,354;CL:0000988,2.22e-18,177;CL:0000839,4.17e-18,66;CL:0002320,2.16e-17,361;CL:0002194,2.35e-17,59;CL:0000576,2.35e-17,59;CL:0000040,2.35e-17,59;CL:0000559,2.35e-17,59;CL:0002009,1.47e-16,61;CL:0000763,3.03e-16,108;CL:0000049,3.03e-16,108;CL:0000219,2.86e-12,386;CL:0000791,1.02e-07,18;CL:0000789,1.02e-07,18;CL:0002420,1.02e-07,18;CL:0002419,1.02e-07,18;CL:0000790,1.02e-07,18;CL:0000359,3.57e-07,32;CL:0000222,5.42e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-15;42!CL:0000790;1.02e-07;18 | |ontology_enrichment_development_v019=CL:0002057;2.05e-15;42!CL:0000790;1.02e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.04e-29!216;UBERON:0002193!9.91e-19!112;UBERON:0002390!3.75e-18!102;UBERON:0003061!3.75e-18!102;UBERON:0002371!3.60e-17!80;UBERON:0002384!4.24e-16!375;UBERON:0001474!9.75e-16!86;UBERON:0002204!1.09e-13!167;UBERON:0004765!7.51e-13!101;UBERON:0001434!7.51e-13!101;UBERON:0001637!2.44e-11!42;UBERON:0003509!2.44e-11!42;UBERON:0004572!2.44e-11!42;UBERON:0000055!6.79e-11!69;UBERON:0001981!1.50e-10!60;UBERON:0007500!1.50e-10!60;UBERON:0004537!1.50e-10!60;UBERON:0006965!1.50e-10!60;UBERON:0002405!2.79e-10!115;UBERON:0004872!1.85e-09!84;UBERON:0004535!3.20e-09!110;UBERON:0004573!3.90e-09!33;UBERON:0004571!3.90e-09!33;UBERON:0001009!3.36e-08!113;UBERON:0000926!3.69e-08!448;UBERON:0004120!3.69e-08!448;UBERON:0006603!3.69e-08!448;UBERON:0002049!6.91e-08!79;UBERON:0007798!6.91e-08!79 | |ontology_enrichment_uberon=UBERON:0003081!2.04e-29!216;UBERON:0002193!9.91e-19!112;UBERON:0002390!3.75e-18!102;UBERON:0003061!3.75e-18!102;UBERON:0002371!3.60e-17!80;UBERON:0002384!4.24e-16!375;UBERON:0001474!9.75e-16!86;UBERON:0002204!1.09e-13!167;UBERON:0004765!7.51e-13!101;UBERON:0001434!7.51e-13!101;UBERON:0001637!2.44e-11!42;UBERON:0003509!2.44e-11!42;UBERON:0004572!2.44e-11!42;UBERON:0000055!6.79e-11!69;UBERON:0001981!1.50e-10!60;UBERON:0007500!1.50e-10!60;UBERON:0004537!1.50e-10!60;UBERON:0006965!1.50e-10!60;UBERON:0002405!2.79e-10!115;UBERON:0004872!1.85e-09!84;UBERON:0004535!3.20e-09!110;UBERON:0004573!3.90e-09!33;UBERON:0004571!3.90e-09!33;UBERON:0001009!3.36e-08!113;UBERON:0000926!3.69e-08!448;UBERON:0004120!3.69e-08!448;UBERON:0006603!3.69e-08!448;UBERON:0002049!6.91e-08!79;UBERON:0007798!6.91e-08!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.36e-08;42!UBERON:0003509;1.36e-08;42!UBERON:0004572;1.36e-08;42!UBERON:0004573;1.85e-08;33!UBERON:0004571;1.85e-08;33!UBERON:0007500;6.62e-07;56!UBERON:0001981;6.62e-07;56!UBERON:0004537;6.62e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0001637;1.36e-08;42!UBERON:0003509;1.36e-08;42!UBERON:0004572;1.36e-08;42!UBERON:0004573;1.85e-08;33!UBERON:0004571;1.85e-08;33!UBERON:0007500;6.62e-07;56!UBERON:0001981;6.62e-07;56!UBERON:0004537;6.62e-07;56 | ||
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| ||
|short_description=p1@FXYD5 | |short_description=p1@FXYD5 | ||
}} | }} |
Latest revision as of 10:27, 17 September 2015
Short description: | p1@FXYD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FXYD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342879, ENST00000392218, ENST00000392219, ENST00000496493, ENST00000541435, ENST00000543307, NM_014164, NM_144779, NR_028406, uc002nyg.1, uc002nyh.1, uc010xsq.1_5end |
EntrezGene: | FXYD5 |
HGNC: | 4029 |
UniProt: | Q96DB9A8MVG1F5H4X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.38e-29 | 203 |
hemolymphoid system | 3.13e-19 | 108 |
hematopoietic system | 1.08e-18 | 98 |
blood island | 1.08e-18 | 98 |
bone marrow | 7.47e-18 | 76 |
immune system | 7.64e-17 | 93 |
mesoderm | 1.09e-16 | 315 |
mesoderm-derived structure | 1.09e-16 | 315 |
presumptive mesoderm | 1.09e-16 | 315 |
bone element | 2.64e-16 | 82 |
connective tissue | 4.15e-16 | 371 |
skeletal element | 1.31e-14 | 90 |
musculoskeletal system | 4.87e-13 | 167 |
skeletal system | 2.04e-12 | 100 |
artery | 2.44e-11 | 42 |
arterial blood vessel | 2.44e-11 | 42 |
arterial system | 2.44e-11 | 42 |
vessel | 8.68e-11 | 68 |
epithelial tube open at both ends | 1.90e-10 | 59 |
blood vessel | 1.90e-10 | 59 |
blood vasculature | 1.90e-10 | 59 |
vascular cord | 1.90e-10 | 59 |
splanchnic layer of lateral plate mesoderm | 2.39e-09 | 83 |
systemic artery | 3.90e-09 | 33 |
systemic arterial system | 3.90e-09 | 33 |
cardiovascular system | 4.12e-09 | 109 |
circulatory system | 4.29e-08 | 112 |
vasculature | 8.84e-08 | 78 |
vascular system | 8.84e-08 | 78 |