FFCP PHASE1:Hg19::chr9:37120474..37120506,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84186 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26209 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011lqi.1_5end | |||
|cluster_id=chr9:37120474..37120506,+ | |||
|description=CAGE_peak_2_at_ZCCHC7_5end | |||
|id=chr9:37120474..37120506,+ | |||
|ontology_enrichment_celltype=CL:0000838!7.44e-07!52;CL:0000236!9.82e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.02e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.84e-07,52;CL:0000542,5.41e-07,53;CL:0000051,5.41e-07,53;CL:0000236,5.95e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-17!115;UBERON:0001049!3.38e-12!57;UBERON:0005068!3.38e-12!57;UBERON:0006241!3.38e-12!57;UBERON:0007135!3.38e-12!57;UBERON:0002346!2.50e-11!90;UBERON:0003075!8.91e-11!86;UBERON:0007284!8.91e-11!86;UBERON:0000073!1.03e-10!94;UBERON:0001016!1.03e-10!94;UBERON:0002616!1.23e-10!59;UBERON:0005743!1.30e-10!86;UBERON:0001017!2.14e-10!82;UBERON:0000955!9.00e-10!69;UBERON:0006238!9.00e-10!69;UBERON:0002780!1.07e-09!41;UBERON:0001890!1.07e-09!41;UBERON:0006240!1.07e-09!41;UBERON:0003080!1.54e-09!42;UBERON:0000153!3.00e-09!129;UBERON:0007811!3.00e-09!129;UBERON:0002020!6.06e-09!34;UBERON:0003528!6.06e-09!34;UBERON:0001893!7.43e-09!34;UBERON:0002791!1.20e-08!33;UBERON:0001869!4.27e-08!32;UBERON:0000033!9.43e-08!123;UBERON:0003056!1.30e-07!61;UBERON:0002619!1.91e-07!22;UBERON:0001950!2.76e-07!20;UBERON:0000924!2.77e-07!173;UBERON:0006601!2.77e-07!173;UBERON:0004121!7.69e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.62e-08;34!UBERON:0002020;7.62e-08;34!UBERON:0001950;1.07e-07;20!UBERON:0002619;1.17e-07;22!UBERON:0001893;1.22e-07;34!UBERON:0002780;1.41e-07;41!UBERON:0001890;1.41e-07;41!UBERON:0002791;2.70e-07;32!UBERON:0001869;2.98e-07;32!UBERON:0000073;4.35e-07;53!UBERON:0002616;4.35e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.33e-17,114;UBERON:0001049,1.24e-12,56;UBERON:0005068,1.24e-12,56;UBERON:0006241,1.24e-12,56;UBERON:0007135,1.24e-12,56;UBERON:0000073,8.78e-12,53;UBERON:0002616,8.78e-12,53;UBERON:0002346,1.26e-11,86;UBERON:0003075,4.71e-11,82;UBERON:0007284,4.71e-11,82;UBERON:0001016,1.58e-10,89;UBERON:0001017,2.58e-10,81;UBERON:0002780,4.65e-10,41;UBERON:0001890,4.65e-10,41;UBERON:0003080,4.65e-10,41;UBERON:0006240,4.65e-10,41;UBERON:0000955,1.27e-09,68;UBERON:0006238,1.27e-09,68;UBERON:0003528,2.91e-09,34;UBERON:0002020,2.91e-09,34;UBERON:0001893,3.60e-09,34;UBERON:0002791,1.36e-08,32;UBERON:0001869,2.22e-08,32;UBERON:0004121,7.05e-08,171;UBERON:0000924,7.05e-08,171;UBERON:0006601,7.05e-08,171;UBERON:0002619,1.08e-07,22;UBERON:0003056,1.39e-07,61;UBERON:0001950,1.59e-07,20;UBERON:0010371,4.01e-07,104;UBERON:0010314,7.91e-07,132 | |||
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| |||
|short_description=p2@ZCCHC7 | |||
}} |
Latest revision as of 10:26, 17 September 2015
Short description: | p2@ZCCHC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZCCHC7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011lqi.1_5end |
EntrezGene: | ZCCHC7 |
HGNC: | 26209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.84e-07 | 52 |
lymphocyte | 5.41e-07 | 53 |
common lymphoid progenitor | 5.41e-07 | 53 |
B cell | 5.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.33e-17 | 114 |
neural tube | 1.24e-12 | 56 |
neural rod | 1.24e-12 | 56 |
future spinal cord | 1.24e-12 | 56 |
neural keel | 1.24e-12 | 56 |
regional part of nervous system | 8.78e-12 | 53 |
regional part of brain | 8.78e-12 | 53 |
neurectoderm | 1.26e-11 | 86 |
neural plate | 4.71e-11 | 82 |
presumptive neural plate | 4.71e-11 | 82 |
nervous system | 1.58e-10 | 89 |
central nervous system | 2.58e-10 | 81 |
regional part of forebrain | 4.65e-10 | 41 |
forebrain | 4.65e-10 | 41 |
anterior neural tube | 4.65e-10 | 41 |
future forebrain | 4.65e-10 | 41 |
brain | 1.27e-09 | 68 |
future brain | 1.27e-09 | 68 |
brain grey matter | 2.91e-09 | 34 |
gray matter | 2.91e-09 | 34 |
telencephalon | 3.60e-09 | 34 |
regional part of telencephalon | 1.36e-08 | 32 |
cerebral hemisphere | 2.22e-08 | 32 |
ectoderm-derived structure | 7.05e-08 | 171 |
ectoderm | 7.05e-08 | 171 |
presumptive ectoderm | 7.05e-08 | 171 |
regional part of cerebral cortex | 1.08e-07 | 22 |
pre-chordal neural plate | 1.39e-07 | 61 |
neocortex | 1.59e-07 | 20 |
ecto-epithelium | 4.01e-07 | 104 |
structure with developmental contribution from neural crest | 7.91e-07 | 132 |