FFCP PHASE1:Hg19::chr9:37034147..37034157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5079 | |EntrezGene=5079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8619 | |HGNC=8619 | ||
|TSSclassifier=strong | |||
|UniProt=Q02548 | |UniProt=Q02548 | ||
|association_with_transcript=-44bp_to_ENST00000358127_5end | |association_with_transcript=-44bp_to_ENST00000358127_5end | ||
|cluster_id=chr9:37034147..37034157,- | |||
|coexpression_cluster_id=C179 | |coexpression_cluster_id=C179 | ||
|description=CAGE_peak_7_at_PAX5_5end | |description=CAGE_peak_7_at_PAX5_5end | ||
|id=chr9:37034147..37034157,- | |id=chr9:37034147..37034157,- | ||
|ontology_enrichment_celltype=CL:0000945!2.24e-68!24;CL:0000826!2.24e-68!24;CL:0000236!8.61e-47!14;CL:0000542!6.39e-31!53;CL:0000051!6.39e-31!53;CL:0000838!1.30e-28!52;CL:0002087!1.03e-18!119;CL:0000738!6.60e-15!140;CL:0000817!8.96e-13!3;CL:0002031!3.19e-12!124;CL:0000842!6.20e-12!3;CL:0000037!6.51e-11!172;CL:0000566!6.51e-11!172;CL:0000988!5.85e-10!182;CL:0000224!4.60e-09!4;CL:0000785!7.28e-09!2;CL:0000955!7.28e-09!2;CL:0000818!7.28e-09!2;CL:0000954!7.28e-09!2;CL:0000816!7.28e-09!2;CL:0002032!1.03e-08!165;CL:0000837!1.03e-08!165 | |ontology_enrichment_celltype=CL:0000945!2.24e-68!24;CL:0000826!2.24e-68!24;CL:0000236!8.61e-47!14;CL:0000542!6.39e-31!53;CL:0000051!6.39e-31!53;CL:0000838!1.30e-28!52;CL:0002087!1.03e-18!119;CL:0000738!6.60e-15!140;CL:0000817!8.96e-13!3;CL:0002031!3.19e-12!124;CL:0000842!6.20e-12!3;CL:0000037!6.51e-11!172;CL:0000566!6.51e-11!172;CL:0000988!5.85e-10!182;CL:0000224!4.60e-09!4;CL:0000785!7.28e-09!2;CL:0000955!7.28e-09!2;CL:0000818!7.28e-09!2;CL:0000954!7.28e-09!2;CL:0000816!7.28e-09!2;CL:0002032!1.03e-08!165;CL:0000837!1.03e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.18e-76;13!CL:0000945;2.49e-58;24!CL:0000542;2.56e-23;53!CL:0000817;1.18e-11;1!CL:0000785;3.81e-11;1!CL:0000819;3.81e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.30e-70,14;CL:0000945,2.37e-58,24;CL:0000826,2.37e-58,24;CL:0000838,5.01e-26,52;CL:0000542,1.67e-25,53;CL:0000051,1.67e-25,53;CL:0000817,3.17e-14,3;CL:0000819,6.00e-11,1;CL:0002087,1.15e-10,115;CL:0002031,3.80e-10,120;CL:0000738,9.63e-09,136;CL:0002032,4.20e-07,161;CL:0000837,4.20e-07,161;CL:0000037,9.91e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.56e-23;53!UBERON:0004872;3.49e-13;7!UBERON:0001045;1.78e-11;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.77e-13!10 | |ontology_enrichment_disease=DOID:0060058!1.77e-13!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;3.81e-11;1!DOID:8675;3.81e-11;1!DOID:0060058;2.14e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.00e-11,1;DOID:8675,6.00e-11,1;DOID:0060058,1.94e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.63e-13!7;UBERON:0002106!2.57e-12!3;UBERON:0004854!2.57e-12!3;UBERON:0009034!2.57e-12!3;UBERON:0002095!2.57e-12!3;UBERON:0004782!2.57e-12!3;UBERON:0003281!2.57e-12!3;UBERON:0009664!2.57e-12!3;UBERON:0002296!2.57e-12!3;UBERON:0005602!2.57e-12!3;UBERON:0001179!2.57e-12!3;UBERON:0006293!2.57e-12!3;UBERON:0000178!9.70e-09!15;UBERON:0000179!9.70e-09!15;UBERON:0000463!9.70e-09!15;UBERON:0007023!2.44e-07!115 | |ontology_enrichment_uberon=UBERON:0004177!2.63e-13!7;UBERON:0002106!2.57e-12!3;UBERON:0004854!2.57e-12!3;UBERON:0009034!2.57e-12!3;UBERON:0002095!2.57e-12!3;UBERON:0004782!2.57e-12!3;UBERON:0003281!2.57e-12!3;UBERON:0009664!2.57e-12!3;UBERON:0002296!2.57e-12!3;UBERON:0005602!2.57e-12!3;UBERON:0001179!2.57e-12!3;UBERON:0006293!2.57e-12!3;UBERON:0000178!9.70e-09!15;UBERON:0000179!9.70e-09!15;UBERON:0000463!9.70e-09!15;UBERON:0007023!2.44e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.05e-14;3!UBERON:0002372;1.78e-11;1!UBERON:0001154;1.78e-11;1!UBERON:0001153;1.78e-11;1!UBERON:0009854;1.78e-11;1!UBERON:0001961;1.78e-11;1!UBERON:0001744;1.78e-11;1!UBERON:0001042;1.78e-11;1!UBERON:0001735;1.78e-11;1!UBERON:0004177;8.84e-09;5!UBERON:0005057;8.84e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.05e-14,3;UBERON:0004854,5.05e-14,3;UBERON:0009034,5.05e-14,3;UBERON:0002095,5.05e-14,3;UBERON:0004782,5.05e-14,3;UBERON:0003281,5.05e-14,3;UBERON:0009664,5.05e-14,3;UBERON:0002296,5.05e-14,3;UBERON:0005602,5.05e-14,3;UBERON:0001179,5.05e-14,3;UBERON:0006293,5.05e-14,3;UBERON:0002372,1.60e-11,1;UBERON:0001961,1.60e-11,1;UBERON:0001744,1.60e-11,1;UBERON:0001735,1.60e-11,1;UBERON:0001154,1.78e-11,1;UBERON:0001153,1.78e-11,1;UBERON:0001045,1.78e-11,1 | |||
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| ||
|short_description=p7@PAX5 | |short_description=p7@PAX5 | ||
}} | }} |
Latest revision as of 10:18, 17 September 2015
Short description: | p7@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PAX5_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -44bp_to_ENST00000358127_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | Q02548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.30e-70 | 14 |
lymphocyte of B lineage | 2.37e-58 | 24 |
pro-B cell | 2.37e-58 | 24 |
lymphoid lineage restricted progenitor cell | 5.01e-26 | 52 |
lymphocyte | 1.67e-25 | 53 |
common lymphoid progenitor | 1.67e-25 | 53 |
precursor B cell | 3.17e-14 | 3 |
B-1 B cell | 6.00e-11 | 1 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.80e-10 | 120 |
leukocyte | 9.63e-09 | 136 |
hematopoietic oligopotent progenitor cell | 4.20e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.20e-07 | 161 |
hematopoietic stem cell | 9.91e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.05e-14 | 3 |
gastrointestinal system mesentery | 5.05e-14 | 3 |
stomach region | 5.05e-14 | 3 |
mesentery | 5.05e-14 | 3 |
gastrointestinal system serosa | 5.05e-14 | 3 |
mesentery of stomach | 5.05e-14 | 3 |
gut mesentery | 5.05e-14 | 3 |
dorsal mesentery | 5.05e-14 | 3 |
dorsal mesogastrium | 5.05e-14 | 3 |
peritoneal cavity | 5.05e-14 | 3 |
spleen primordium | 5.05e-14 | 3 |
tonsil | 1.60e-11 | 1 |
mucosa-associated lymphoid tissue | 1.60e-11 | 1 |
lymphoid tissue | 1.60e-11 | 1 |
tonsillar ring | 1.60e-11 | 1 |
vermiform appendix | 1.78e-11 | 1 |
caecum | 1.78e-11 | 1 |
midgut | 1.78e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.00e-11 | 1 |
lymphosarcoma | 6.00e-11 | 1 |
lymphoma | 1.94e-09 | 10 |