FFCP PHASE1:Hg19::chr1:28520450..28520453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5724 | |EntrezGene=5724 | ||
| Line 8: | Line 8: | ||
|UniProt=A8K7N8,P25105 | |UniProt=A8K7N8,P25105 | ||
|association_with_transcript=-3bp_to_ENST00000539896,NM_001164721,NM_001164722,uc001bpm.3,uc009vte.2_5end | |association_with_transcript=-3bp_to_ENST00000539896,NM_001164721,NM_001164722,uc001bpm.3,uc009vte.2_5end | ||
|cluster_id=chr1:28520450..28520453,- | |||
|coexpression_cluster_id=C253 | |coexpression_cluster_id=C253 | ||
|description=CAGE_peak_21_at_PTAFR_5end | |description=CAGE_peak_21_at_PTAFR_5end | ||
Latest revision as of 10:04, 17 September 2015
| Short description: | p21@PTAFR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_21_at_PTAFR_5end |
| Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
| Association with transcript: | -3bp_to_ENST00000539896, NM_001164721, NM_001164722, uc001bpm.3, uc009vte.2_5end |
| EntrezGene: | PTAFR |
| HGNC: | 9582 |
| UniProt: | A8K7N8P25105 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p21@PTAFR |
|---|
0.0
0.5
1.0
1.5
2.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| spleen | 8.98e-131 | 3 |
| gastrointestinal system mesentery | 8.98e-131 | 3 |
| stomach region | 8.98e-131 | 3 |
| mesentery | 8.98e-131 | 3 |
| gastrointestinal system serosa | 8.98e-131 | 3 |
| mesentery of stomach | 8.98e-131 | 3 |
| gut mesentery | 8.98e-131 | 3 |
| dorsal mesentery | 8.98e-131 | 3 |
| dorsal mesogastrium | 8.98e-131 | 3 |
| peritoneal cavity | 8.98e-131 | 3 |
Showing 1 to 10 of 30 entries
