FFCP PHASE1:Hg19::chr10:17243340..17243355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1787 | |EntrezGene=1787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2977 | |HGNC=2977 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_ENST00000486947_5end | |association_with_transcript=71bp_to_ENST00000486947_5end | ||
|cluster_id=chr10:17243340..17243355,- | |||
|coexpression_cluster_id=C82 | |coexpression_cluster_id=C82 | ||
|description=CAGE_peak_3_at_TRDMT1_5end | |description=CAGE_peak_3_at_TRDMT1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!6.55e-29!42;CL:0000860!6.48e-28!45;CL:0000738!8.89e-25!140;CL:0000557!4.25e-23!71;CL:0000766!2.30e-22!76;CL:0002009!3.12e-21!65;CL:0000839!2.05e-20!70;CL:0002031!3.50e-20!124;CL:0002087!3.91e-20!119;CL:0002194!4.95e-19!63;CL:0000576!4.95e-19!63;CL:0000040!4.95e-19!63;CL:0000559!4.95e-19!63;CL:0000037!1.49e-18!172;CL:0000566!1.49e-18!172;CL:0000988!1.57e-16!182;CL:0002032!2.33e-15!165;CL:0000837!2.33e-15!165;CL:0002393!9.21e-15!9;CL:0002397!9.21e-15!9;CL:0000134!1.18e-14!358;CL:0002320!1.73e-14!365;CL:0000763!4.84e-14!112;CL:0000049!4.84e-14!112;CL:0000034!8.46e-13!444;CL:0000219!9.34e-13!390;CL:0000048!3.03e-12!430;CL:0000723!1.04e-11!436;CL:0000144!2.60e-08!625;CL:0002371!1.24e-07!591 | |ontology_enrichment_celltype=CL:0002057!6.55e-29!42;CL:0000860!6.48e-28!45;CL:0000738!8.89e-25!140;CL:0000557!4.25e-23!71;CL:0000766!2.30e-22!76;CL:0002009!3.12e-21!65;CL:0000839!2.05e-20!70;CL:0002031!3.50e-20!124;CL:0002087!3.91e-20!119;CL:0002194!4.95e-19!63;CL:0000576!4.95e-19!63;CL:0000040!4.95e-19!63;CL:0000559!4.95e-19!63;CL:0000037!1.49e-18!172;CL:0000566!1.49e-18!172;CL:0000988!1.57e-16!182;CL:0002032!2.33e-15!165;CL:0000837!2.33e-15!165;CL:0002393!9.21e-15!9;CL:0002397!9.21e-15!9;CL:0000134!1.18e-14!358;CL:0002320!1.73e-14!365;CL:0000763!4.84e-14!112;CL:0000049!4.84e-14!112;CL:0000034!8.46e-13!444;CL:0000219!9.34e-13!390;CL:0000048!3.03e-12!430;CL:0000723!1.04e-11!436;CL:0000144!2.60e-08!625;CL:0002371!1.24e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002393;6.96e-28;6!CL:0002397;6.96e-28;6!CL:0000767;7.15e-22;3!CL:0000623;1.10e-20;3!CL:0001014;1.28e-14;2!CL:0001016;1.28e-14;2!CL:0000097;7.52e-13;5!CL:0000226;8.20e-10;3!CL:0000842;8.20e-10;3!CL:0000766;1.94e-09;69!CL:0000094;1.63e-08;8!CL:0000037;3.70e-08;1!CL:0001024;3.70e-08;1!CL:0000163;2.40e-07;9!CL:0000576;4.95e-07;48 | |ontology_enrichment_celltype_v019=CL:0002393;6.96e-28;6!CL:0002397;6.96e-28;6!CL:0000767;7.15e-22;3!CL:0000623;1.10e-20;3!CL:0001014;1.28e-14;2!CL:0001016;1.28e-14;2!CL:0000097;7.52e-13;5!CL:0000226;8.20e-10;3!CL:0000842;8.20e-10;3!CL:0000766;1.94e-09;69!CL:0000094;1.63e-08;8!CL:0000037;3.70e-08;1!CL:0001024;3.70e-08;1!CL:0000163;2.40e-07;9!CL:0000576;4.95e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.45e-28,136;CL:0000037,2.51e-24,168;CL:0000988,7.43e-23,177;CL:0000767,6.46e-22,3;CL:0000623,1.40e-20,3;CL:0000825,1.40e-20,3;CL:0002031,2.66e-20,120;CL:0002032,1.73e-19,161;CL:0000837,1.73e-19,161;CL:0002393,1.12e-18,9;CL:0002397,1.12e-18,9;CL:0000766,9.17e-18,72;CL:0000557,1.71e-16,67;CL:0002087,5.51e-15,115;CL:0001014,1.04e-14,2;CL:0001016,1.04e-14,2;CL:0000763,1.81e-14,108;CL:0000049,1.81e-14,108;CL:0000097,6.81e-13,5;CL:0002028,6.81e-13,5;CL:0000839,4.67e-12,66;CL:0000860,2.48e-11,42;CL:0002057,2.48e-11,42;CL:0002009,5.43e-11,61;CL:0000226,8.97e-10,3;CL:0000842,8.97e-10,3;CL:0000473,9.67e-10,48;CL:0000234,9.67e-10,48;CL:0000134,5.30e-09,354;CL:0002320,9.91e-09,361;CL:0000094,1.57e-08,8;CL:0001024,3.83e-08,1;CL:0000034,8.11e-08,441;CL:0000219,9.01e-08,386;CL:0002194,1.62e-07,59;CL:0000576,1.62e-07,59;CL:0000040,1.62e-07,59;CL:0000559,1.62e-07,59;CL:0000163,2.27e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.11e-07;42 | |ontology_enrichment_development_v019=CL:0002057;5.11e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.03e-21!80;UBERON:0001474!2.64e-19!86;UBERON:0002390!8.32e-19!102;UBERON:0003061!8.32e-19!102;UBERON:0004765!1.74e-16!101;UBERON:0001434!1.74e-16!101;UBERON:0002193!6.52e-16!112;UBERON:0002384!6.17e-14!375;UBERON:0002405!2.99e-12!115;UBERON:0003081!1.97e-10!216;UBERON:0002204!7.54e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!1.03e-21!80;UBERON:0001474!2.64e-19!86;UBERON:0002390!8.32e-19!102;UBERON:0003061!8.32e-19!102;UBERON:0004765!1.74e-16!101;UBERON:0001434!1.74e-16!101;UBERON:0002193!6.52e-16!112;UBERON:0002384!6.17e-14!375;UBERON:0002405!2.99e-12!115;UBERON:0003081!1.97e-10!216;UBERON:0002204!7.54e-09!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-16,76;UBERON:0002390,4.59e-16,98;UBERON:0003061,4.59e-16,98;UBERON:0001474,3.91e-15,82;UBERON:0002193,2.79e-14,108;UBERON:0004765,1.52e-13,90;UBERON:0002405,5.09e-13,93;UBERON:0001434,6.49e-12,100;UBERON:0002384,2.33e-08,371 | |||
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|short_description=p3@TRDMT1 | |short_description=p3@TRDMT1 | ||
}} | }} |
Latest revision as of 10:00, 17 September 2015
Short description: | p3@TRDMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRDMT1_5end |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | 71bp_to_ENST00000486947_5end |
EntrezGene: | TRDMT1 |
HGNC: | 2977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-16 | 76 |
hematopoietic system | 4.59e-16 | 98 |
blood island | 4.59e-16 | 98 |
bone element | 3.91e-15 | 82 |
hemolymphoid system | 2.79e-14 | 108 |
skeletal element | 1.52e-13 | 90 |
immune system | 5.09e-13 | 93 |
skeletal system | 6.49e-12 | 100 |
connective tissue | 2.33e-08 | 371 |