FFCP PHASE1:Hg19::chr2:45236648..45236659,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10736 | |EntrezGene=10736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10888 | |HGNC=10888 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPC8 | |UniProt=Q9NPC8 | ||
|association_with_transcript=-79bp_to_ENST00000303077_5end | |association_with_transcript=-79bp_to_ENST00000303077_5end | ||
|cluster_id=chr2:45236648..45236659,- | |||
|description=CAGE_peak_5_at_SIX2_5end | |description=CAGE_peak_5_at_SIX2_5end | ||
|id=chr2:45236648..45236659,- | |id=chr2:45236648..45236659,- | ||
|ontology_enrichment_celltype=CL:0000499!5.00e-11!27;CL:0000327!7.81e-11!14;CL:0000153!5.79e-09!9;CL:0000447!5.79e-09!9;CL:0002556!2.09e-07!6;CL:0000630!4.51e-07!9 | |ontology_enrichment_celltype=CL:0000499!5.00e-11!27;CL:0000327!7.81e-11!14;CL:0000153!5.79e-09!9;CL:0000447!5.79e-09!9;CL:0002556!2.09e-07!6;CL:0000630!4.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002575;5.42e-19;2!CL:0000669;5.70e-10;4!CL:0002552;2.36e-08;5!CL:0002569;3.13e-07;6!CL:0000138;4.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.53e-19,2;CL:0000669,5.21e-10,4;CL:0002552,1.83e-08,5;CL:0002569,3.14e-07,6;CL:0000058,4.00e-07,6;CL:0000138,4.00e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.28e-10;1!UBERON:0008425;2.28e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.14e-07!28;UBERON:0000930!1.14e-07!28;UBERON:0001758!2.09e-07!6;UBERON:0003672!2.09e-07!6;UBERON:0000075!4.30e-07!13;UBERON:0005944!4.30e-07!13;UBERON:0004288!4.30e-07!13;UBERON:0003089!4.30e-07!13;UBERON:0003129!9.52e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.28e-10;1!UBERON:0003422;3.13e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,3.61e-10,1;UBERON:0007645,3.61e-10,1;UBERON:0007647,3.61e-10,1;UBERON:0010115,3.61e-10,1;UBERON:0003422,3.14e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,2.50668955317945,0.579386075843295,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.933633106199299,0,0,1.66493170409425,0,0,0,0,0,0,0,0,1.83738754129404,0.859840221182376,6.30287265172169,0,0.494533858557114,0,0,0.168336113954066,0.875829639103749,0.831192346452549,0.438977620880838,0,2.70428506031874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.36669142910475,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,3.11512312139057,3.44585807502342,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.03985430765404,0,0,0.117141414992713,1.20378439891088,0,0,0,0,0,1.17480694477644,1.37257369524342,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.462145851343933,0.460511024178389,0,0,0.290033387828457,0,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,1.13697999995054,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.34945333648406,0,0.19351266257817,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0.554805861502613,0.378806010550178,1.0062716070103,0,0,1.51230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0,0,0.353378291891762,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0.76736622782191,0.215649622793364,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,1.98916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13831095675649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0.801711364730253,0.828864656652147,1.0243108625637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,2.50668955317945,0.579386075843295,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.933633106199299,0,0,1.66493170409425,0,0,0,0,0,0,0,0,1.83738754129404,0.859840221182376,6.30287265172169,0,0.494533858557114,0,0,0.168336113954066,0.875829639103749,0.831192346452549,0.438977620880838,0,2.70428506031874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.36669142910475,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,3.11512312139057,3.44585807502342,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.03985430765404,0,0,0.117141414992713,1.20378439891088,0,0,0,0,0,1.17480694477644,1.37257369524342,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.462145851343933,0.460511024178389,0,0,0.290033387828457,0,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,1.13697999995054,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.34945333648406,0,0.19351266257817,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0.554805861502613,0.378806010550178,1.0062716070103,0,0,1.51230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0,0,0.353378291891762,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0.76736622782191,0.215649622793364,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,1.98916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13831095675649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0.801711364730253,0.828864656652147,1.0243108625637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@SIX2 | |short_description=p5@SIX2 | ||
}} | }} |
Latest revision as of 09:54, 17 September 2015
Short description: | p5@SIX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_ENST00000303077_5end |
EntrezGene: | SIX2 |
HGNC: | 10888 |
UniProt: | Q9NPC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.53e-19 | 2 |
pericyte cell | 5.21e-10 | 4 |
fibroblast of gingiva | 1.83e-08 | 5 |
mesenchymal stem cell of umbilical cord | 3.14e-07 | 6 |
chondroblast | 4.00e-07 | 6 |
chondrocyte | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dura mater | 3.61e-10 | 1 |
future meninx | 3.61e-10 | 1 |
ectomeninx | 3.61e-10 | 1 |
future dura mater | 3.61e-10 | 1 |
mesenchyme of umbilical cord | 3.14e-07 | 6 |