FFCP PHASE1:Hg19::chr6:26365404..26365440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11118 | |EntrezGene=11118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1139 | |HGNC=1139 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000524682,ENST00000528222_5end | |association_with_transcript=0bp_to_ENST00000524682,ENST00000528222_5end | ||
|cluster_id=chr6:26365404..26365440,+ | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_2_at_BTN3A2_5end | |description=CAGE_peak_2_at_BTN3A2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000542!1.12e-16!53;CL:0000051!1.12e-16!53;CL:0000838!2.03e-16!52;CL:0000738!2.01e-12!140;CL:0002087!7.50e-12!119;CL:0002031!1.49e-10!124;CL:0000791!1.12e-09!18;CL:0000789!1.12e-09!18;CL:0002420!1.12e-09!18;CL:0002419!1.12e-09!18;CL:0000790!1.12e-09!18;CL:0000037!1.00e-08!172;CL:0000566!1.00e-08!172;CL:0000945!2.88e-08!24;CL:0000826!2.88e-08!24;CL:0000084!4.98e-08!25;CL:0000827!4.98e-08!25;CL:0002032!5.49e-08!165;CL:0000837!5.49e-08!165;CL:0000625!6.21e-08!11;CL:0000236!4.03e-07!14 | |ontology_enrichment_celltype=CL:0000542!1.12e-16!53;CL:0000051!1.12e-16!53;CL:0000838!2.03e-16!52;CL:0000738!2.01e-12!140;CL:0002087!7.50e-12!119;CL:0002031!1.49e-10!124;CL:0000791!1.12e-09!18;CL:0000789!1.12e-09!18;CL:0002420!1.12e-09!18;CL:0002419!1.12e-09!18;CL:0000790!1.12e-09!18;CL:0000037!1.00e-08!172;CL:0000566!1.00e-08!172;CL:0000945!2.88e-08!24;CL:0000826!2.88e-08!24;CL:0000084!4.98e-08!25;CL:0000827!4.98e-08!25;CL:0002032!5.49e-08!165;CL:0000837!5.49e-08!165;CL:0000625!6.21e-08!11;CL:0000236!4.03e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.55e-10;53!CL:0000791;9.42e-10;18!CL:0000789;9.42e-10;18!CL:0002419;9.42e-10;18!CL:0000945;1.46e-08;24!CL:0000084;1.52e-08;25!CL:0000625;4.00e-08;11!CL:0000236;6.48e-07;13 | |ontology_enrichment_celltype_v019=CL:0000542;1.55e-10;53!CL:0000791;9.42e-10;18!CL:0000789;9.42e-10;18!CL:0002419;9.42e-10;18!CL:0000945;1.46e-08;24!CL:0000084;1.52e-08;25!CL:0000625;4.00e-08;11!CL:0000236;6.48e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.93e-17,53;CL:0000051,9.93e-17,53;CL:0000838,1.80e-16,52;CL:0000738,1.45e-11,136;CL:0002087,5.34e-11,115;CL:0000791,1.05e-09,18;CL:0000789,1.05e-09,18;CL:0002420,1.05e-09,18;CL:0002419,1.05e-09,18;CL:0000790,1.05e-09,18;CL:0002031,1.11e-09,120;CL:0000945,2.73e-08,24;CL:0000826,2.73e-08,24;CL:0000084,4.72e-08,25;CL:0000827,4.72e-08,25;CL:0000037,5.08e-08,168;CL:0000625,5.89e-08,11;CL:0002032,2.64e-07,161;CL:0000837,2.64e-07,161;CL:0000236,3.85e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.55e-10;53!CL:0000790;9.42e-10;18 | |ontology_enrichment_development_v019=CL:0000051;1.55e-10;53!CL:0000790;9.42e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-11!115 | |ontology_enrichment_uberon=UBERON:0007023!3.69e-11!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.53e-11,114 | |||
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| ||
|short_description=p2@BTN3A2 | |short_description=p2@BTN3A2 | ||
}} | }} |
Latest revision as of 09:46, 17 September 2015
Short description: | p2@BTN3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BTN3A2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000524682, ENST00000528222_5end |
EntrezGene: | BTN3A2 |
HGNC: | 1139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.93e-17 | 53 |
common lymphoid progenitor | 9.93e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.80e-16 | 52 |
leukocyte | 1.45e-11 | 136 |
nongranular leukocyte | 5.34e-11 | 115 |
mature alpha-beta T cell | 1.05e-09 | 18 |
alpha-beta T cell | 1.05e-09 | 18 |
immature T cell | 1.05e-09 | 18 |
mature T cell | 1.05e-09 | 18 |
immature alpha-beta T cell | 1.05e-09 | 18 |
hematopoietic lineage restricted progenitor cell | 1.11e-09 | 120 |
lymphocyte of B lineage | 2.73e-08 | 24 |
pro-B cell | 2.73e-08 | 24 |
T cell | 4.72e-08 | 25 |
pro-T cell | 4.72e-08 | 25 |
hematopoietic stem cell | 5.08e-08 | 168 |
CD8-positive, alpha-beta T cell | 5.89e-08 | 11 |
hematopoietic oligopotent progenitor cell | 2.64e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.64e-07 | 161 |
B cell | 3.85e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.53e-11 | 114 |